RNA–Protein interactions for RNA: YLL039C

UBI4, Transcript of Ubiquitin, yeastyeast

Gene UBI4, Length 1,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBI4YLL039C TFB5Q3E7C1 72 aaPredicted RBP3.84□□□□□ -1.79
UBI4YLL039C MATALPHA1P0CY06 175 aa3.83□□□□□ -1.8
UBI4YLL039C HMLALPHA1P0CY07 175 aa3.83□□□□□ -1.8
UBI4YLL039C RPL30P14120 105 aaKnown RBP3.83□□□□□ -1.8
UBI4YLL039C CPR4P25334 318 aa3.83□□□□□ -1.8
UBI4YLL039C YCL042WP25572 119 aa3.83□□□□□ -1.8
UBI4YLL039C DAL80P26343 269 aa3.83□□□□□ -1.8
UBI4YLL039C POP5P28005 173 aa3.83□□□□□ -1.8
UBI4YLL039C LAC1P28496 418 aa3.83□□□□□ -1.8
UBI4YLL039C GLC7P32598 312 aaKnown RBP3.83□□□□□ -1.8
UBI4YLL039C SNC2P33328 115 aa3.83□□□□□ -1.8
UBI4YLL039C SSH1P38353 490 aaKnown RBP3.83□□□□□ -1.8
UBI4YLL039C YBR292CP38357 123 aa3.83□□□□□ -1.8
UBI4YLL039C PAC2P39937 518 aa3.83□□□□□ -1.8
UBI4YLL039C RFC2P40348 353 aa3.83□□□□□ -1.8
UBI4YLL039C YIL029CP40538 142 aa3.83□□□□□ -1.8
UBI4YLL039C OST1P41543 476 aaKnown RBP3.83□□□□□ -1.8
UBI4YLL039C ERJ5P43613 295 aaPredicted RBP3.83□□□□□ -1.8
UBI4YLL039C YJR012CP47087 207 aa3.83□□□□□ -1.8
UBI4YLL039C YIP4P53093 235 aa3.83□□□□□ -1.8
UBI4YLL039C YNR048WP53740 393 aa3.83□□□□□ -1.8
UBI4YLL039C TIM10P87108 93 aa3.83□□□□□ -1.8
UBI4YLL039C YML018CQ03730 393 aa3.83□□□□□ -1.8
UBI4YLL039C YTH1Q06102 208 aaPredicted RBP3.83□□□□□ -1.8
UBI4YLL039C GAT3Q07928 141 aa3.83□□□□□ -1.8
UBI4YLL039C SRL2Q12020 392 aa3.83□□□□□ -1.8
UBI4YLL039C FCF2Q12035 217 aaPredicted RBP3.83□□□□□ -1.8
UBI4YLL039C USB1Q12208 290 aaKnown RBP3.83□□□□□ -1.8
UBI4YLL039C INP53Q12271 1107 aa3.83□□□□□ -1.8
UBI4YLL039C TFC7Q12415 435 aa3.83□□□□□ -1.8
UBI4YLL039C AGC1Q12482 902 aa3.83□□□□□ -1.8
UBI4YLL039C COX19Q3E731 98 aa3.83□□□□□ -1.8
UBI4YLL039C YNR034W-AQ3E841 98 aa3.83□□□□□ -1.8
UBI4YLL039C ILV5P06168 395 aaKnown RBP3.82□□□□□ -1.8
UBI4YLL039C ADK1P07170 222 aaKnown RBP3.82□□□□□ -1.8
UBI4YLL039C RPS23AP0CX29 145 aaKnown RBP3.82□□□□□ -1.8
UBI4YLL039C RPS23BP0CX30 145 aa3.82□□□□□ -1.8
UBI4YLL039C MSI1P13712 422 aa3.82□□□□□ -1.8
UBI4YLL039C BGL2P15703 313 aaKnown RBP3.82□□□□□ -1.8
UBI4YLL039C YCR007CP25354 239 aa3.82□□□□□ -1.8
UBI4YLL039C LSB5P25369 354 aa3.82□□□□□ -1.8
UBI4YLL039C COQ3P27680 312 aa3.82□□□□□ -1.8
UBI4YLL039C ERG24P32462 438 aaKnown RBP3.82□□□□□ -1.8
UBI4YLL039C PPZ2P33329 710 aa3.82□□□□□ -1.8
UBI4YLL039C YKL102CP34249 101 aa3.82□□□□□ -1.8
UBI4YLL039C MCH2P36032 473 aa3.82□□□□□ -1.8
UBI4YLL039C YBR013CP38215 129 aa3.82□□□□□ -1.8
UBI4YLL039C ECM14P38836 430 aa3.82□□□□□ -1.8
UBI4YLL039C PHS1P40857 217 aa3.82□□□□□ -1.8
UBI4YLL039C CIN2P46670 268 aa3.82□□□□□ -1.8
UBI4YLL039C YGL117WP53133 265 aa3.82□□□□□ -1.8
UBI4YLL039C YGL114WP53134 725 aa3.82□□□□□ -1.8
UBI4YLL039C SMM1P53720 384 aaKnown RBP3.82□□□□□ -1.8
UBI4YLL039C YIF1P53845 314 aaKnown RBP3.82□□□□□ -1.8
UBI4YLL039C SED1Q01589 338 aa3.82□□□□□ -1.8
UBI4YLL039C TMA23Q03525 211 aa3.82□□□□□ -1.8
UBI4YLL039C YMR253CQ04835 414 aa3.82□□□□□ -1.8
UBI4YLL039C BER1Q06688 274 aaKnown RBP3.82□□□□□ -1.8
UBI4YLL039C RAD28Q12021 506 aa3.82□□□□□ -1.8
UBI4YLL039C TIR4Q12218 487 aaPredicted RBP3.82□□□□□ -1.8
UBI4YLL039C ORT1Q12375 292 aa3.82□□□□□ -1.8
UBI4YLL039C YBR182C-AQ8TGU6 64 aa3.82□□□□□ -1.8
UBI4YLL039C TDH2P00358 332 aaKnown RBP3.81□□□□□ -1.8
UBI4YLL039C URA6P15700 204 aa3.81□□□□□ -1.8
UBI4YLL039C MIR1P23641 311 aaKnown RBP3.81□□□□□ -1.8
UBI4YLL039C AFG1P32317 509 aa3.81□□□□□ -1.8
UBI4YLL039C REC114P32841 428 aa3.81□□□□□ -1.8
UBI4YLL039C MNS1P32906 549 aa3.81□□□□□ -1.8
UBI4YLL039C RIB5P38145 238 aa3.81□□□□□ -1.8
UBI4YLL039C FIG1P38224 298 aa3.81□□□□□ -1.8
UBI4YLL039C ARC40P38328 384 aaKnown RBP3.81□□□□□ -1.8
UBI4YLL039C CUE1P38428 203 aa3.81□□□□□ -1.8
UBI4YLL039C CAT5P41735 233 aa3.81□□□□□ -1.8
UBI4YLL039C YJR011CP47086 261 aaPredicted RBP3.81□□□□□ -1.8
UBI4YLL039C AVT4P50944 713 aa3.81□□□□□ -1.8
UBI4YLL039C YGL262WP53054 175 aa3.81□□□□□ -1.8
UBI4YLL039C NIF3P53081 288 aa3.81□□□□□ -1.8
UBI4YLL039C RNH201P53942 307 aa3.81□□□□□ -1.8
UBI4YLL039C YDR366CP87287 132 aa3.81□□□□□ -1.8
UBI4YLL039C ASM4Q05166 528 aa3.81□□□□□ -1.8
UBI4YLL039C YPR098CQ06089 161 aa3.81□□□□□ -1.8
UBI4YLL039C PAU23Q07987 124 aa3.81□□□□□ -1.8
UBI4YLL039C RFU1Q08003 200 aa3.81□□□□□ -1.8
UBI4YLL039C TMC1Q08422 150 aaPredicted RBP3.81□□□□□ -1.8
UBI4YLL039C PAU17Q12370 124 aa3.81□□□□□ -1.8
UBI4YLL039C YPR014CQ6B0W2 109 aa3.81□□□□□ -1.8
UBI4YLL039C RPL9AP05738 191 aaKnown RBP3.8□□□□□ -1.8
UBI4YLL039C NHP6AP11632 93 aaKnown RBP3.8□□□□□ -1.8
UBI4YLL039C ANB1P19211 157 aa3.8□□□□□ -1.8
UBI4YLL039C SAG1P20840 650 aa3.8□□□□□ -1.8
UBI4YLL039C CNE1P27825 502 aa3.8□□□□□ -1.8
UBI4YLL039C SUA7P29055 345 aaPredicted RBP3.8□□□□□ -1.8
UBI4YLL039C PEX4P29340 183 aa3.8□□□□□ -1.8
UBI4YLL039C MRPL11P36521 249 aaPredicted RBP3.8□□□□□ -1.8
UBI4YLL039C AME1P38313 324 aa3.8□□□□□ -1.8
UBI4YLL039C YIL012WP40551 113 aa3.8□□□□□ -1.8
UBI4YLL039C BUD8P41698 603 aa3.8□□□□□ -1.8
UBI4YLL039C EGT2P42835 1041 aa3.8□□□□□ -1.8
UBI4YLL039C PAU5P43575 122 aa3.8□□□□□ -1.8
UBI4YLL039C YJL163CP46996 555 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 132.7 ms