RNA–Protein interactions for RNA: YKL141W

SDH3, Transcript of Subunit of succinate dehydrogenase and of TIM22 translocase, yeastyeast

Gene SDH3, Length 597 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH3YKL141W PRP11Q07350 266 aaPredicted RBP2.58□□□□□ -2
SDH3YKL141W PAM18Q07914 168 aa2.58□□□□□ -2
SDH3YKL141W RFU1Q08003 200 aa2.58□□□□□ -2
SDH3YKL141W TMC1Q08422 150 aaPredicted RBP2.58□□□□□ -2
SDH3YKL141W YOR376WQ08900 122 aa2.58□□□□□ -2
SDH3YKL141W AIM45Q12480 344 aaKnown RBP2.58□□□□□ -2
SDH3YKL141W COX19Q3E731 98 aa2.58□□□□□ -2
SDH3YKL141W YCL021W-AQ96VH3 125 aa2.58□□□□□ -2
SDH3YKL141W BEM2P39960 2167 aaKnown RBP2.58□□□□□ -2
SDH3YKL141W RPL25P04456 142 aaKnown RBP2.57□□□□□ -2
SDH3YKL141W ARO3P14843 370 aaKnown RBP2.57□□□□□ -2
SDH3YKL141W APA2P22108 325 aa2.57□□□□□ -2
SDH3YKL141W MDH2P22133 377 aa2.57□□□□□ -2
SDH3YKL141W DEG1P31115 442 aaKnown RBP2.57□□□□□ -2
SDH3YKL141W OCH1P31755 480 aa2.57□□□□□ -2
SDH3YKL141W REC114P32841 428 aa2.57□□□□□ -2
SDH3YKL141W ATG8P38182 117 aaRIP-Chip data2.57□□□□□ -2not detected
SDH3YKL141W NTC20P38302 140 aaPredicted RBP2.57□□□□□ -2
SDH3YKL141W OM14P38325 134 aa2.57□□□□□ -2
SDH3YKL141W TRS20P38334 175 aa2.57□□□□□ -2
SDH3YKL141W PRS2P38620 318 aaKnown RBP2.57□□□□□ -2
SDH3YKL141W SMD3P43321 101 aaKnown RBP2.57□□□□□ -2
SDH3YKL141W YJR012CP47087 207 aa2.57□□□□□ -2
SDH3YKL141W NRM1P53718 249 aa2.57□□□□□ -2
SDH3YKL141W YDR391CQ04170 232 aa2.57□□□□□ -2
SDH3YKL141W YMR082CQ04276 118 aa2.57□□□□□ -2
SDH3YKL141W YMR090WQ04304 227 aaKnown RBP2.57□□□□□ -2
SDH3YKL141W HRI1Q05905 244 aaKnown RBP2.57□□□□□ -2
SDH3YKL141W MDM30Q05930 598 aa2.57□□□□□ -2
SDH3YKL141W DCS1Q06151 350 aa2.57□□□□□ -2
SDH3YKL141W YLR179CQ06252 201 aaKnown RBP2.57□□□□□ -2
SDH3YKL141W YOR186WQ08560 144 aa2.57□□□□□ -2
SDH3YKL141W IZH2Q12442 317 aa2.57□□□□□ -2
SDH3YKL141W AGC1Q12482 902 aa2.57□□□□□ -2
SDH3YKL141W LSO2Q3E772 92 aaKnown RBP2.57□□□□□ -2
SDH3YKL141W YPR108W-AQ3E7B3 70 aa2.57□□□□□ -2
SDH3YKL141W FAS1P07149 2051 aaKnown RBP2.56□□□□□ -2
SDH3YKL141W CBP6P07253 162 aaPredicted RBP2.56□□□□□ -2
SDH3YKL141W YFR010W-AP0C5N0 62 aa2.56□□□□□ -2
SDH3YKL141W SEC59P20048 519 aa2.56□□□□□ -2
SDH3YKL141W DAL82P21705 255 aa2.56□□□□□ -2
SDH3YKL141W SEC62P21825 274 aa2.56□□□□□ -2
SDH3YKL141W ERG2P32352 222 aa2.56□□□□□ -2
SDH3YKL141W AGA2P32781 87 aa2.56□□□□□ -2
SDH3YKL141W CLB6P32943 380 aa2.56□□□□□ -2
SDH3YKL141W RPB7P34087 171 aa2.56□□□□□ -2
SDH3YKL141W SWD2P36104 329 aaPredicted RBP2.56□□□□□ -2
SDH3YKL141W DAD2P36162 133 aa2.56□□□□□ -2
SDH3YKL141W MRPL39P36533 70 aa2.56□□□□□ -2
SDH3YKL141W YPT31P38555 223 aaKnown RBP2.56□□□□□ -2
SDH3YKL141W WSS1P38838 269 aa2.56□□□□□ -2
SDH3YKL141W UIP3P39547 235 aa2.56□□□□□ -2
SDH3YKL141W RMD6P39975 231 aa2.56□□□□□ -2
SDH3YKL141W PAU15P40585 124 aa2.56□□□□□ -2
SDH3YKL141W ECO1P43605 281 aa2.56□□□□□ -2
SDH3YKL141W LSM8P47093 109 aaKnown RBP2.56□□□□□ -2
SDH3YKL141W CGR1P53188 120 aa2.56□□□□□ -2
SDH3YKL141W YGR026WP53217 278 aa2.56□□□□□ -2
SDH3YKL141W SNO1Q03144 224 aa2.56□□□□□ -2
SDH3YKL141W RSM10Q03201 203 aa2.56□□□□□ -2
SDH3YKL141W MIX14Q04341 121 aa2.56□□□□□ -2
SDH3YKL141W YMR253CQ04835 414 aa2.56□□□□□ -2
SDH3YKL141W PIN3Q06449 215 aa2.56□□□□□ -2
SDH3YKL141W FRE8Q12209 686 aa2.56□□□□□ -2
SDH3YKL141W HUT1Q12520 339 aa2.56□□□□□ -2
SDH3YKL141W RPB3P16370 318 aaKnown RBP2.55□□□□□ -2
SDH3YKL141W SAG1P20840 650 aa2.55□□□□□ -2
SDH3YKL141W PCL1P24867 279 aa2.55□□□□□ -2
SDH3YKL141W ERV1P27882 189 aa2.55□□□□□ -2
SDH3YKL141W MNS1P32906 549 aa2.55□□□□□ -2
SDH3YKL141W UPS2P35200 230 aa2.55□□□□□ -2
SDH3YKL141W MCH2P36032 473 aa2.55□□□□□ -2
SDH3YKL141W SDH4P37298 181 aa2.55□□□□□ -2
SDH3YKL141W MRPS9P38120 278 aa2.55□□□□□ -2
SDH3YKL141W SWD3P38123 315 aa2.55□□□□□ -2
SDH3YKL141W FIG1P38224 298 aa2.55□□□□□ -2
SDH3YKL141W RTC3P38804 111 aaPredicted RBP2.55□□□□□ -2
SDH3YKL141W FLO9P39712 1322 aa2.55□□□□□ -2
SDH3YKL141W YER079WP40052 210 aaKnown RBP2.55□□□□□ -2
SDH3YKL141W YIL029CP40538 142 aa2.55□□□□□ -2
SDH3YKL141W PHS1P40857 217 aa2.55□□□□□ -2
SDH3YKL141W VMA21P41806 77 aa2.55□□□□□ -2
SDH3YKL141W DAN1P47178 298 aa2.55□□□□□ -2
SDH3YKL141W MGA1P53050 456 aa2.55□□□□□ -2
SDH3YKL141W YGL262WP53054 175 aa2.55□□□□□ -2
SDH3YKL141W MSO1P53604 210 aaKnown RBP2.55□□□□□ -2
SDH3YKL141W PDR17P53844 350 aa2.55□□□□□ -2
SDH3YKL141W YMR279CQ03263 540 aa2.55□□□□□ -2
SDH3YKL141W GMC1Q04399 608 aa2.55□□□□□ -2
SDH3YKL141W DPB4Q04603 196 aaKnown RBP2.55□□□□□ -2
SDH3YKL141W UPS1Q05776 175 aa2.55□□□□□ -2
SDH3YKL141W YPR098CQ06089 161 aa2.55□□□□□ -2
SDH3YKL141W MHR1Q06630 226 aa2.55□□□□□ -2
SDH3YKL141W HRD1Q08109 551 aa2.55□□□□□ -2
SDH3YKL141W YOR292CQ08743 309 aa2.55□□□□□ -2
SDH3YKL141W YPL264CQ08980 353 aa2.55□□□□□ -2
SDH3YKL141W FCY22Q12119 530 aa2.55□□□□□ -2
SDH3YKL141W YDL180WQ12301 547 aa2.55□□□□□ -2
SDH3YKL141W PRR2Q12310 699 aa2.55□□□□□ -2
SDH3YKL141W YLR118CQ12354 227 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 65.5 ms