RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W RNA14P25298 677 aaKnown RBP1.85□□□□□ -2.11
NUP100YKL068W TVP38P36164 337 aa1.85□□□□□ -2.11
NUP100YKL068W YEA4P40004 342 aa1.85□□□□□ -2.11
NUP100YKL068W YNL208WP40159 199 aaKnown RBP1.85□□□□□ -2.11
NUP100YKL068W RPR2P40571 144 aa1.85□□□□□ -2.11
NUP100YKL068W SDT1P53078 280 aa1.85□□□□□ -2.11
NUP100YKL068W ARO8P53090 500 aaKnown RBP1.85□□□□□ -2.11
NUP100YKL068W HPT1Q04178 221 aaKnown RBP1.85□□□□□ -2.11
NUP100YKL068W YMR254CQ04838 102 aa1.85□□□□□ -2.11
NUP100YKL068W LDB18Q07887 179 aa1.85□□□□□ -2.11
NUP100YKL068W YIR021W-AQ3E739 70 aa1.85□□□□□ -2.11
NUP100YKL068W PBI2P0CT04 75 aaKnown RBP1.84□□□□□ -2.11
NUP100YKL068W UGX2P32772 223 aa1.84□□□□□ -2.11
NUP100YKL068W FMP23P38231 175 aa1.84□□□□□ -2.11
NUP100YKL068W HMF1P40037 129 aaKnown RBP1.84□□□□□ -2.11
NUP100YKL068W ERJ5P43613 295 aaPredicted RBP1.84□□□□□ -2.11
NUP100YKL068W ORM1P53224 222 aa1.84□□□□□ -2.11
NUP100YKL068W YGR050CP53231 118 aa1.84□□□□□ -2.11
NUP100YKL068W RNH201P53942 307 aa1.84□□□□□ -2.11
NUP100YKL068W HHT1P61830 136 aa1.84□□□□□ -2.11
NUP100YKL068W GAS3Q03655 524 aa1.84□□□□□ -2.11
NUP100YKL068W YOR342CQ12182 319 aa1.84□□□□□ -2.11
NUP100YKL068W CRC1Q12289 327 aa1.84□□□□□ -2.11
NUP100YKL068W YAL063C-AQ3E791 96 aa1.84□□□□□ -2.11
NUP100YKL068W CDC7P06243 507 aa1.84□□□□□ -2.11
NUP100YKL068W ILV6P25605 309 aaKnown RBP1.84□□□□□ -2.11
NUP100YKL068W BUD23P25627 275 aaPredicted RBP1.84□□□□□ -2.11
NUP100YKL068W LDS1P31379 325 aa1.84□□□□□ -2.11
NUP100YKL068W POP4P38336 279 aa1.84□□□□□ -2.11
NUP100YKL068W BAT1P38891 393 aaKnown RBP1.84□□□□□ -2.11
NUP100YKL068W PRM5P40476 318 aa1.84□□□□□ -2.11
NUP100YKL068W APQ12P40532 138 aa1.84□□□□□ -2.11
NUP100YKL068W STB1P42845 420 aa1.84□□□□□ -2.11
NUP100YKL068W YFL067WP43537 175 aa1.84□□□□□ -2.11
NUP100YKL068W SNO3P43544 222 aa1.84□□□□□ -2.11
NUP100YKL068W MNN5P46982 586 aa1.84□□□□□ -2.11
NUP100YKL068W ARP3P47117 449 aaKnown RBP1.84□□□□□ -2.11
NUP100YKL068W BNS1P50084 137 aa1.84□□□□□ -2.11
NUP100YKL068W CRH1P53301 507 aa1.84□□□□□ -2.11
NUP100YKL068W BOR1P53838 576 aa1.84□□□□□ -2.11
NUP100YKL068W LSM3P57743 89 aaKnown RBP1.84□□□□□ -2.11
NUP100YKL068W ACT1P60010 375 aaKnown RBP1.84□□□□□ -2.11
NUP100YKL068W YML108WQ03759 105 aa1.84□□□□□ -2.11
NUP100YKL068W SDH7Q04401 133 aa1.84□□□□□ -2.11
NUP100YKL068W HRD1Q08109 551 aa1.84□□□□□ -2.11
NUP100YKL068W TDA8Q6B2U8 126 aa1.84□□□□□ -2.11
NUP100YKL068W YFR032C-BQ8TGU2 87 aa1.84□□□□□ -2.11
NUP100YKL068W BGL2P15703 313 aaKnown RBP1.84□□□□□ -2.12
NUP100YKL068W CKS1P20486 150 aaKnown RBP1.84□□□□□ -2.12
NUP100YKL068W TFC1P32367 649 aa1.84□□□□□ -2.12
NUP100YKL068W PHO89P38361 574 aa1.84□□□□□ -2.12
NUP100YKL068W RFC2P40348 353 aa1.84□□□□□ -2.12
NUP100YKL068W CFD1P40558 293 aa1.84□□□□□ -2.12
NUP100YKL068W YGR219WP53307 113 aa1.84□□□□□ -2.12
NUP100YKL068W YMR244WQ04018 355 aa1.84□□□□□ -2.12
NUP100YKL068W EMI1Q04406 187 aa1.84□□□□□ -2.12
NUP100YKL068W FMP42Q04991 504 aa1.84□□□□□ -2.12
NUP100YKL068W PRP11Q07350 266 aaPredicted RBP1.84□□□□□ -2.12
NUP100YKL068W ATX2Q12067 313 aa1.84□□□□□ -2.12
NUP100YKL068W TIR4Q12218 487 aaPredicted RBP1.84□□□□□ -2.12
NUP100YKL068W YFL068WP0CX99 160 aa1.83□□□□□ -2.12
NUP100YKL068W YLL066W-AP0CY00 160 aa1.83□□□□□ -2.12
NUP100YKL068W YLL067W-AP0CY01 160 aa1.83□□□□□ -2.12
NUP100YKL068W RPL30P14120 105 aaKnown RBP1.83□□□□□ -2.12
NUP100YKL068W SCL1P21243 252 aaKnown RBP1.83□□□□□ -2.12
NUP100YKL068W RPS1BP23248 255 aaKnown RBP1.83□□□□□ -2.12
NUP100YKL068W CSE2P33308 149 aa1.83□□□□□ -2.12
NUP100YKL068W SRX1P36077 127 aa1.83□□□□□ -2.12
NUP100YKL068W GGC1P38988 300 aa1.83□□□□□ -2.12
NUP100YKL068W AST2P39945 430 aaKnown RBP1.83□□□□□ -2.12
NUP100YKL068W YGR015CP53208 328 aa1.83□□□□□ -2.12
NUP100YKL068W RUB1Q03919 77 aa1.83□□□□□ -2.12
NUP100YKL068W RPL21BQ12672 160 aaKnown RBP1.83□□□□□ -2.12
NUP100YKL068W NAG1Q8TGN9 163 aa1.83□□□□□ -2.12
NUP100YKL068W YOR304C-AO14468 76 aa1.83□□□□□ -2.12
NUP100YKL068W ATR1P13090 542 aa1.83□□□□□ -2.12
NUP100YKL068W RSA4P25382 515 aaKnown RBP1.83□□□□□ -2.12
NUP100YKL068W SUI1P32911 108 aaKnown RBP1.83□□□□□ -2.12
NUP100YKL068W TRS20P38334 175 aa1.83□□□□□ -2.12
NUP100YKL068W RPS20P38701 121 aaKnown RBP1.83□□□□□ -2.12
NUP100YKL068W MEP2P41948 499 aa1.83□□□□□ -2.12
NUP100YKL068W BUD13P46947 266 aaPredicted RBP1.83□□□□□ -2.12
NUP100YKL068W ILM1P47155 203 aa1.83□□□□□ -2.12
NUP100YKL068W DID2P69771 204 aa1.83□□□□□ -2.12
NUP100YKL068W INP1Q03694 420 aa1.83□□□□□ -2.12
NUP100YKL068W THI74Q04083 370 aa1.83□□□□□ -2.12
NUP100YKL068W TRM12Q04235 462 aa1.83□□□□□ -2.12
NUP100YKL068W YPL162CQ12042 273 aa1.83□□□□□ -2.12
NUP100YKL068W MPD1Q12404 318 aaKnown RBP1.83□□□□□ -2.12
NUP100YKL068W NMT1P14743 455 aa1.82□□□□□ -2.12
NUP100YKL068W CNB1P25296 175 aa1.82□□□□□ -2.12
NUP100YKL068W MSA2P36157 363 aa1.82□□□□□ -2.12
NUP100YKL068W MRPL24P36525 258 aaPredicted RBP1.82□□□□□ -2.12
NUP100YKL068W OM14P38325 134 aa1.82□□□□□ -2.12
NUP100YKL068W FCY21P40039 528 aa1.82□□□□□ -2.12
NUP100YKL068W RGI1P40043 161 aaPredicted RBP1.82□□□□□ -2.12
NUP100YKL068W PGD1P40356 397 aa1.82□□□□□ -2.12
NUP100YKL068W DIM1P41819 318 aaKnown RBP1.82□□□□□ -2.12
NUP100YKL068W GLR1P41921 483 aaKnown RBP1.82□□□□□ -2.12
NUP100YKL068W ATG18P43601 500 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 72.4 ms