RNA–Protein interactions for RNA: YJL034W

KAR2, Transcript of ATPase involved in protein import into the ER, yeast

Gene KAR2, Length 2,049 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KAR2	YJL034W	SWD2	P36104	329 aa	Predicted RBP	4.07	□□□□□ -1.76
KAR2	YJL034W	MRPL39	P36533	70 aa		4.07	□□□□□ -1.76
KAR2	YJL034W	POP2	P39008	433 aa		4.07	□□□□□ -1.76
KAR2	YJL034W	CCS1	P40202	249 aa	Known RBP	4.07	□□□□□ -1.76
KAR2	YJL034W	XBP1	P40489	647 aa		4.07	□□□□□ -1.76
KAR2	YJL034W	YGR151C	P53287	111 aa		4.07	□□□□□ -1.76
KAR2	YJL034W	ATG4	P53867	494 aa		4.07	□□□□□ -1.76
KAR2	YJL034W	YAP6	Q03935	383 aa		4.07	□□□□□ -1.76
KAR2	YJL034W	AIM45	Q12480	344 aa	Known RBP	4.07	□□□□□ -1.76
KAR2	YJL034W	VMA3	P25515	160 aa		4.07	□□□□□ -1.76
KAR2	YJL034W	MRPS9	P38120	278 aa		4.07	□□□□□ -1.76
KAR2	YJL034W	SUR2	P38992	349 aa		4.07	□□□□□ -1.76
KAR2	YJL034W	UPS3	Q04006	179 aa		4.07	□□□□□ -1.76
KAR2	YJL034W	YDR391C	Q04170	232 aa		4.07	□□□□□ -1.76
KAR2	YJL034W	YOL029C	Q08187	201 aa		4.07	□□□□□ -1.76
KAR2	YJL034W	RAX2	Q12465	1220 aa		4.07	□□□□□ -1.76
KAR2	YJL034W	RPL7A	P05737	244 aa	Known RBP	4.06	□□□□□ -1.76
KAR2	YJL034W	SAG1	P20840	650 aa		4.06	□□□□□ -1.76
KAR2	YJL034W	RPB10	P22139	70 aa		4.06	□□□□□ -1.76
KAR2	YJL034W	LSB5	P25369	354 aa		4.06	□□□□□ -1.76
KAR2	YJL034W	MCH2	P36032	473 aa		4.06	□□□□□ -1.76
KAR2	YJL034W	CUE1	P38428	203 aa		4.06	□□□□□ -1.76
KAR2	YJL034W	BDH1	P39714	382 aa		4.06	□□□□□ -1.76
KAR2	YJL034W	YEA4	P40004	342 aa		4.06	□□□□□ -1.76
KAR2	YJL034W	YIL169C	P40442	995 aa		4.06	□□□□□ -1.76
KAR2	YJL034W	PAU5	P43575	122 aa		4.06	□□□□□ -1.76
KAR2	YJL034W	HNT2	P49775	206 aa		4.06	□□□□□ -1.76
KAR2	YJL034W	YPR098C	Q06089	161 aa		4.06	□□□□□ -1.76
KAR2	YJL034W	PIN3	Q06449	215 aa		4.06	□□□□□ -1.76
KAR2	YJL034W	RPL7B	Q12213	244 aa	Known RBP	4.06	□□□□□ -1.76
KAR2	YJL034W	ERV2	Q12284	196 aa		4.06	□□□□□ -1.76
KAR2	YJL034W	ILV5	P06168	395 aa	Known RBP	4.05	□□□□□ -1.76
KAR2	YJL034W	MNS1	P32906	549 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	RPB7	P34087	171 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	YUH1	P35127	236 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	PHS1	P40857	217 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	CIN5	P40917	295 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	TAF4	P50105	388 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	RCE1	Q03530	315 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	YMR254C	Q04838	102 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	ASM4	Q05166	528 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	FRE8	Q12209	686 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	YPR108W-A	Q3E7B3	70 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	ADE8	P04161	214 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	ERS1	P17261	260 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	ERG2	P32352	222 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	MRPS5	P33759	307 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	YKL075C	P36083	450 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	TRS20	P38334	175 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	SLM6	P38343	150 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	YER079W	P40052	210 aa	Known RBP	4.05	□□□□□ -1.76
KAR2	YJL034W	PRM5	P40476	318 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	CDC40	P40968	455 aa	Predicted RBP	4.05	□□□□□ -1.76
KAR2	YJL034W	ATG27	P46989	271 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	FSH2	Q05015	223 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	ATG40	Q99325	256 aa		4.05	□□□□□ -1.76
KAR2	YJL034W	NTC20	P38302	140 aa	Predicted RBP	4.04	□□□□□ -1.76
KAR2	YJL034W	PAC2	P39937	518 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	IRC22	P40006	225 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	SEC24	P40482	926 aa	Known RBP	4.04	□□□□□ -1.76
KAR2	YJL034W	MSO1	P53604	210 aa	Known RBP	4.04	□□□□□ -1.76
KAR2	YJL034W	YNR040W	P53736	256 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	HED1	Q03937	162 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	TSA2	Q04120	196 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	UPS1	Q05776	175 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	MSC3	Q05812	728 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	PRP11	Q07350	266 aa	Predicted RBP	4.04	□□□□□ -1.76
KAR2	YJL034W	RRS1	Q08746	203 aa	Known RBP	4.04	□□□□□ -1.76
KAR2	YJL034W	PIN2	Q12057	282 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	SME1	Q12330	94 aa	Predicted RBP	4.04	□□□□□ -1.76
KAR2	YJL034W	MPD1	Q12404	318 aa	Known RBP	4.04	□□□□□ -1.76
KAR2	YJL034W	POR1	P04840	283 aa	Known RBP	4.04	□□□□□ -1.76
KAR2	YJL034W	DDI2	P0CH63	225 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	DDI3	P0CH64	225 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	MSI1	P13712	422 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	NOP1	P15646	327 aa	Known RBP	4.04	□□□□□ -1.76
KAR2	YJL034W	SWD3	P38123	315 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	YBR292C	P38357	123 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	WSS1	P38838	269 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	OST1	P41543	476 aa	Known RBP	4.04	□□□□□ -1.76
KAR2	YJL034W	HIT1	P46973	164 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	ABM1	P47146	123 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	ERG25	P53045	309 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	YNR066C	P53752	436 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	YMR082C	Q04276	118 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	YMR090W	Q04304	227 aa	Known RBP	4.04	□□□□□ -1.76
KAR2	YJL034W	YPL257W	Q08974	193 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	ALG6	Q12001	544 aa	Known RBP	4.04	□□□□□ -1.76
KAR2	YJL034W	NCE102	Q12207	173 aa	RIP-Chip data	4.04	□□□□□ -1.76	not detected
KAR2	YJL034W	RDL1	Q12305	139 aa	Known RBP	4.04	□□□□□ -1.76
KAR2	YJL034W	HUG1	Q6Q5K6	68 aa		4.04	□□□□□ -1.76
KAR2	YJL034W	RPL35A	P0CX84	120 aa	Known RBP	4.03	□□□□□ -1.76
KAR2	YJL034W	RPL35B	P0CX85	120 aa	Known RBP	4.03	□□□□□ -1.76
KAR2	YJL034W	ERV1	P27882	189 aa		4.03	□□□□□ -1.76
KAR2	YJL034W	IMP1	P28627	190 aa		4.03	□□□□□ -1.76
KAR2	YJL034W	SUA7	P29055	345 aa	Predicted RBP	4.03	□□□□□ -1.76
KAR2	YJL034W	GSP1	P32835	219 aa	Known RBP	4.03	□□□□□ -1.76
KAR2	YJL034W	GSP2	P32836	220 aa	Known RBP	4.03	□□□□□ -1.76
KAR2	YJL034W	PRY2	P36110	329 aa		4.03	□□□□□ -1.76
KAR2	YJL034W	MTC6	P38849	526 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms