RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C IRC22P40006 225 aa1.74□□□□□ -2.13
CTK2YJL006C VTC1P40046 129 aaRIP-Chip data1.74□□□□□ -2.13not detected
CTK2YJL006C HOP2P53187 214 aa1.74□□□□□ -2.13
CTK2YJL006C SNZ1Q03148 297 aa1.74□□□□□ -2.13
CTK2YJL006C FKS3Q04952 1785 aa1.74□□□□□ -2.13
CTK2YJL006C RAD9P14737 1309 aa1.73□□□□□ -2.13
CTK2YJL006C TUS1Q06412 1307 aa1.73□□□□□ -2.13
CTK2YJL006C CDC28P00546 298 aaKnown RBP1.73□□□□□ -2.13
CTK2YJL006C YPR170W-BP0C5R9 85 aa1.73□□□□□ -2.13
CTK2YJL006C MEI4P29467 408 aa1.73□□□□□ -2.13
CTK2YJL006C APS1P35181 156 aa1.73□□□□□ -2.13
CTK2YJL006C YCR087C-AP37263 153 aa1.73□□□□□ -2.13
CTK2YJL006C DOG2P38773 246 aa1.73□□□□□ -2.13
CTK2YJL006C TRM5P38793 499 aa1.73□□□□□ -2.13
CTK2YJL006C YER135CP40082 130 aa1.73□□□□□ -2.13
CTK2YJL006C AGE2P40529 298 aa1.73□□□□□ -2.13
CTK2YJL006C RPL33BP41056 107 aaKnown RBP1.73□□□□□ -2.13
CTK2YJL006C PRM8P53174 237 aa1.73□□□□□ -2.13
CTK2YJL006C NOP19P53317 196 aaPredicted RBP1.73□□□□□ -2.13
CTK2YJL006C PDR17P53844 350 aa1.73□□□□□ -2.13
CTK2YJL006C BUD25P85052 153 aa1.73□□□□□ -2.13
CTK2YJL006C YDR248CQ03786 193 aa1.73□□□□□ -2.13
CTK2YJL006C TRM12Q04235 462 aa1.73□□□□□ -2.13
CTK2YJL006C MDN1Q12019 4910 aaKnown RBP1.73□□□□□ -2.13
CTK2YJL006C QCR7P00128 127 aa1.72□□□□□ -2.13
CTK2YJL006C GCN3P14741 305 aa1.72□□□□□ -2.13
CTK2YJL006C DBF2P22204 572 aa1.72□□□□□ -2.13
CTK2YJL006C ADE1P27616 306 aa1.72□□□□□ -2.13
CTK2YJL006C AVT2P39981 480 aa1.72□□□□□ -2.13
CTK2YJL006C ICE2P40499 491 aa1.72□□□□□ -2.13
CTK2YJL006C FAR7P43592 221 aa1.72□□□□□ -2.13
CTK2YJL006C LPP1Q04396 274 aa1.72□□□□□ -2.13
CTK2YJL006C YCL012CQ8J0M4 134 aa1.72□□□□□ -2.13
CTK2YJL006C APC1P53886 1748 aa1.71□□□□□ -2.13
CTK2YJL006C REP2P03872 296 aa1.71□□□□□ -2.14
CTK2YJL006C SPS18P32572 300 aa1.71□□□□□ -2.14
CTK2YJL006C PGD1P40356 397 aa1.71□□□□□ -2.14
CTK2YJL006C TIR3P40552 269 aa1.71□□□□□ -2.14
CTK2YJL006C GPM2Q12008 311 aa1.71□□□□□ -2.14
CTK2YJL006C TRA1P38811 3744 aa1.7□□□□□ -2.14
CTK2YJL006C APA2P22108 325 aa1.7□□□□□ -2.14
CTK2YJL006C ATG22P25568 528 aa1.7□□□□□ -2.14
CTK2YJL006C ATP7P30902 174 aa1.7□□□□□ -2.14
CTK2YJL006C MMS2P53152 137 aa1.7□□□□□ -2.14
CTK2YJL006C SPG3Q04398 127 aaPredicted RBP1.7□□□□□ -2.14
CTK2YJL006C SML1Q04964 104 aa1.7□□□□□ -2.14
CTK2YJL006C MDM32Q12171 622 aa1.7□□□□□ -2.14
CTK2YJL006C YOL162WP0CF19 215 aa1.69□□□□□ -2.14
CTK2YJL006C KSS1P14681 368 aa1.69□□□□□ -2.14
CTK2YJL006C POP4P38336 279 aa1.69□□□□□ -2.14
CTK2YJL006C EGD2P38879 174 aaKnown RBP1.69□□□□□ -2.14
CTK2YJL006C SEC72P39742 193 aaKnown RBP1.69□□□□□ -2.14
CTK2YJL006C RMD6P39975 231 aa1.69□□□□□ -2.14
CTK2YJL006C YER034WP40022 185 aaKnown RBP1.69□□□□□ -2.14
CTK2YJL006C AIF1P52923 378 aa1.69□□□□□ -2.14
CTK2YJL006C NUP192P47054 1683 aa1.69□□□□□ -2.14
CTK2YJL006C RIM15P43565 1770 aa1.69□□□□□ -2.14
CTK2YJL006C QCR6P00127 147 aa1.68□□□□□ -2.14
CTK2YJL006C RPL25P04456 142 aaKnown RBP1.68□□□□□ -2.14
CTK2YJL006C SEC4P07560 215 aaKnown RBP1.68□□□□□ -2.14
CTK2YJL006C YLR156WP0CE96 114 aa1.68□□□□□ -2.14
CTK2YJL006C YLR159WP0CE97 114 aa1.68□□□□□ -2.14
CTK2YJL006C YLR161WP0CE98 114 aa1.68□□□□□ -2.14
CTK2YJL006C MRPS28P21771 286 aa1.68□□□□□ -2.14
CTK2YJL006C CAF4P36130 643 aa1.68□□□□□ -2.14
CTK2YJL006C MRPL28P36527 147 aa1.68□□□□□ -2.14
CTK2YJL006C YBR219CP38317 127 aa1.68□□□□□ -2.14
CTK2YJL006C SHG1P38337 142 aa1.68□□□□□ -2.14
CTK2YJL006C RTC4P53850 401 aa1.68□□□□□ -2.14
CTK2YJL006C LSM7P53905 115 aaKnown RBP1.68□□□□□ -2.14
CTK2YJL006C YET3Q07451 203 aa1.68□□□□□ -2.14
CTK2YJL006C YNG1Q08465 219 aa1.68□□□□□ -2.14
CTK2YJL006C CMC2Q3E7A4 109 aa1.68□□□□□ -2.14
CTK2YJL006C TDA8Q6B2U8 126 aa1.68□□□□□ -2.14
CTK2YJL006C YRF1-3P0CX14 1859 aa1.67□□□□□ -2.14
CTK2YJL006C YRF1-7P0CX15 1859 aa1.67□□□□□ -2.14
CTK2YJL006C YRF1-6P53819 1859 aa1.67□□□□□ -2.14
CTK2YJL006C HFA1P32874 2273 aa1.67□□□□□ -2.14
CTK2YJL006C MAG1P22134 296 aaKnown RBP1.67□□□□□ -2.14
CTK2YJL006C TCA17P32613 152 aa1.67□□□□□ -2.14
CTK2YJL006C VPS51P36116 164 aa1.67□□□□□ -2.14
CTK2YJL006C YNL217WP40152 326 aa1.67□□□□□ -2.14
CTK2YJL006C DOC1P53068 250 aa1.67□□□□□ -2.14
CTK2YJL006C BOL2P53082 120 aa1.67□□□□□ -2.14
CTK2YJL006C DYN1P36022 4092 aa1.67□□□□□ -2.14
CTK2YJL006C UBR2Q07963 1872 aa1.67□□□□□ -2.14
CTK2YJL006C YGL010WP25338 174 aa1.66□□□□□ -2.14
CTK2YJL006C PTM1P32857 523 aa1.66□□□□□ -2.14
CTK2YJL006C YKR045CP36138 183 aa1.66□□□□□ -2.14
CTK2YJL006C SKG1P36169 355 aa1.66□□□□□ -2.14
CTK2YJL006C AST2P39945 430 aaKnown RBP1.66□□□□□ -2.14
CTK2YJL006C HMF1P40037 129 aaKnown RBP1.66□□□□□ -2.14
CTK2YJL006C SWP1Q02795 286 aa1.66□□□□□ -2.14
CTK2YJL006C GIM5Q04493 163 aa1.66□□□□□ -2.14
CTK2YJL006C CSI2Q08054 341 aa1.66□□□□□ -2.14
CTK2YJL006C ROM2P51862 1356 aaKnown RBP1.66□□□□□ -2.14
CTK2YJL006C GEA1P47102 1408 aaPredicted RBP1.66□□□□□ -2.14
CTK2YJL006C MRS1P07266 363 aa1.65□□□□□ -2.15
CTK2YJL006C YBR220CP38318 560 aa1.65□□□□□ -2.15
CTK2YJL006C AIM25P47140 327 aa1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 109.5 ms