RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W FUS3P16892 353 aaKnown RBP4.74□□□□□ -1.65
PRE3YJL001W MRS4P23500 304 aa4.74□□□□□ -1.65
PRE3YJL001W LSB5P25369 354 aa4.74□□□□□ -1.65
PRE3YJL001W MRPL49P40858 161 aaPredicted RBP4.74□□□□□ -1.65
PRE3YJL001W RTS2P40962 232 aa4.74□□□□□ -1.65
PRE3YJL001W LPP1Q04396 274 aa4.74□□□□□ -1.65
PRE3YJL001W PBP4Q07362 185 aaKnown RBP4.74□□□□□ -1.65
PRE3YJL001W NDE2Q07500 545 aa4.74□□□□□ -1.65
PRE3YJL001W TIR4Q12218 487 aaPredicted RBP4.74□□□□□ -1.65
PRE3YJL001W RBD2Q12270 262 aa4.74□□□□□ -1.65
PRE3YJL001W COX2P00410 251 aa4.73□□□□□ -1.65
PRE3YJL001W PHD1P36093 366 aa4.73□□□□□ -1.65
PRE3YJL001W GOS1P38736 223 aa4.73□□□□□ -1.65
PRE3YJL001W SMB1P40018 196 aaKnown RBP4.73□□□□□ -1.65
PRE3YJL001W COX15P40086 486 aa4.73□□□□□ -1.65
PRE3YJL001W GVP36P40531 326 aaKnown RBP4.73□□□□□ -1.65
PRE3YJL001W SYS1P41544 203 aa4.73□□□□□ -1.65
PRE3YJL001W FMP48P53233 369 aa4.73□□□□□ -1.65
PRE3YJL001W CWC25P53854 179 aaKnown RBP4.73□□□□□ -1.65
PRE3YJL001W ALG9P53868 555 aaKnown RBP4.73□□□□□ -1.65
PRE3YJL001W YDR274CP87283 123 aa4.73□□□□□ -1.65
PRE3YJL001W TDA1Q03533 586 aa4.73□□□□□ -1.65
PRE3YJL001W YDR286CQ05530 114 aa4.73□□□□□ -1.65
PRE3YJL001W YOR292CQ08743 309 aa4.73□□□□□ -1.65
PRE3YJL001W YPL199CQ08954 240 aa4.73□□□□□ -1.65
PRE3YJL001W RPL9AP05738 191 aaKnown RBP4.72□□□□□ -1.65
PRE3YJL001W IFM1P25038 676 aa4.72□□□□□ -1.65
PRE3YJL001W RPS2P25443 254 aaKnown RBP4.72□□□□□ -1.65
PRE3YJL001W HYM1P32464 399 aa4.72□□□□□ -1.65
PRE3YJL001W SHE2P36068 246 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
PRE3YJL001W MPC2P38857 129 aa4.72□□□□□ -1.65
PRE3YJL001W PCL7P40186 285 aa4.72□□□□□ -1.65
PRE3YJL001W BNA6P43619 295 aa4.72□□□□□ -1.65
PRE3YJL001W YAE1P47118 141 aaPredicted RBP4.72□□□□□ -1.65
PRE3YJL001W ERG25P53045 309 aa4.72□□□□□ -1.65
PRE3YJL001W SLX9P53251 210 aaPredicted RBP4.72□□□□□ -1.65
PRE3YJL001W HIS3P06633 220 aa4.71□□□□□ -1.66
PRE3YJL001W GRX2P17695 143 aaKnown RBP4.71□□□□□ -1.66
PRE3YJL001W ROX3P25046 220 aa4.71□□□□□ -1.66
PRE3YJL001W YCP4P25349 247 aaKnown RBP4.71□□□□□ -1.66
PRE3YJL001W PDC2P32896 925 aa4.71□□□□□ -1.66
PRE3YJL001W YUH1P35127 236 aa4.71□□□□□ -1.66
PRE3YJL001W PCL6P40038 420 aa4.71□□□□□ -1.66
PRE3YJL001W YNL194CP40169 301 aa4.71□□□□□ -1.66
PRE3YJL001W BMT5P40493 336 aa4.71□□□□□ -1.66
PRE3YJL001W YMR181CQ03231 154 aa4.71□□□□□ -1.66
PRE3YJL001W YLR365WQ7LIF2 110 aa4.71□□□□□ -1.66
PRE3YJL001W ODC2Q99297 307 aa4.71□□□□□ -1.66
PRE3YJL001W YMR31P19955 123 aa4.7□□□□□ -1.66
PRE3YJL001W SRY1P36007 326 aa4.7□□□□□ -1.66
PRE3YJL001W SRL3P36167 246 aa4.7□□□□□ -1.66
PRE3YJL001W FCY21P40039 528 aa4.7□□□□□ -1.66
PRE3YJL001W RFC2P40348 353 aa4.7□□□□□ -1.66
PRE3YJL001W YJL218WP40892 196 aaKnown RBP4.7□□□□□ -1.66
PRE3YJL001W YGR210CP42942 411 aa4.7□□□□□ -1.66
PRE3YJL001W CRH1P53301 507 aa4.7□□□□□ -1.66
PRE3YJL001W YGR219WP53307 113 aa4.7□□□□□ -1.66
PRE3YJL001W CAB5Q03941 241 aa4.7□□□□□ -1.66
PRE3YJL001W BOL1Q3E793 110 aa4.7□□□□□ -1.66
PRE3YJL001W YPR108W-AQ3E7B3 70 aa4.7□□□□□ -1.66
PRE3YJL001W TAR1Q8TGM6 124 aa4.7□□□□□ -1.66
PRE3YJL001W HTB1P02293 131 aaKnown RBP4.69□□□□□ -1.66
PRE3YJL001W PET54P10834 293 aa4.69□□□□□ -1.66
PRE3YJL001W URA6P15700 204 aa4.69□□□□□ -1.66
PRE3YJL001W YPS1P32329 569 aa4.69□□□□□ -1.66
PRE3YJL001W GEP4P38812 185 aa4.69□□□□□ -1.66
PRE3YJL001W YJR011CP47086 261 aaPredicted RBP4.69□□□□□ -1.66
PRE3YJL001W VHT1P53241 593 aa4.69□□□□□ -1.66
PRE3YJL001W TSA2Q04120 196 aa4.69□□□□□ -1.66
PRE3YJL001W IRC23Q08416 157 aa4.69□□□□□ -1.66
PRE3YJL001W ATG41Q12048 136 aa4.69□□□□□ -1.66
PRE3YJL001W RPS18AP0CX55 146 aaKnown RBP4.68□□□□□ -1.66
PRE3YJL001W RPS18BP0CX56 146 aaPredicted RBP4.68□□□□□ -1.66
PRE3YJL001W SEN2P16658 377 aa4.68□□□□□ -1.66
PRE3YJL001W RPL24BP24000 155 aaKnown RBP4.68□□□□□ -1.66
PRE3YJL001W MRPL38P35996 138 aaPredicted RBP4.68□□□□□ -1.66
PRE3YJL001W NRG2P38082 220 aa4.68□□□□□ -1.66
PRE3YJL001W ECM33P38248 429 aaKnown RBP4.68□□□□□ -1.66
PRE3YJL001W MED8P38304 223 aa4.68□□□□□ -1.66
PRE3YJL001W YJR012CP47087 207 aa4.68□□□□□ -1.66
PRE3YJL001W GRX3Q03835 250 aa4.68□□□□□ -1.66
PRE3YJL001W MRPL35Q06678 367 aa4.68□□□□□ -1.66
PRE3YJL001W MIC12P38341 106 aa4.67□□□□□ -1.66
PRE3YJL001W RTT105P40063 208 aa4.67□□□□□ -1.66
PRE3YJL001W OTU1P43558 301 aa4.67□□□□□ -1.66
PRE3YJL001W TMA20P89886 181 aaPredicted RBP4.67□□□□□ -1.66
PRE3YJL001W YMR130WQ04223 302 aa4.67□□□□□ -1.66
PRE3YJL001W PHO92Q06390 306 aa4.67□□□□□ -1.66
PRE3YJL001W GPN3Q06543 272 aa4.67□□□□□ -1.66
PRE3YJL001W ATG18P43601 500 aa4.66□□□□□ -1.66
PRE3YJL001W CAX4P53223 239 aa4.66□□□□□ -1.66
PRE3YJL001W YGR042WP53227 271 aa4.66□□□□□ -1.66
PRE3YJL001W PEX10Q05568 337 aa4.66□□□□□ -1.66
PRE3YJL001W YFH1Q07540 174 aa4.66□□□□□ -1.66
PRE3YJL001W HUG1Q6Q5K6 68 aa4.66□□□□□ -1.66
PRE3YJL001W VPS63O13549 108 aa4.65□□□□□ -1.67
PRE3YJL001W PET494P07390 489 aaPredicted RBP4.65□□□□□ -1.67
PRE3YJL001W CDC23P16522 626 aa4.65□□□□□ -1.67
PRE3YJL001W YCR007CP25354 239 aa4.65□□□□□ -1.67
PRE3YJL001W ALK2P32789 676 aaPredicted RBP4.65□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 52 ms