RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C YDR248CQ03786 193 aa3.01□□□□□ -1.93
SSM4YIL030C CAB5Q03941 241 aa3.01□□□□□ -1.93
SSM4YIL030C ATG10Q07879 167 aa3.01□□□□□ -1.93
SSM4YIL030C YDL007C-AQ2V2Q0 85 aa3.01□□□□□ -1.93
SSM4YIL030C YIL134C-AQ45U18 67 aa3.01□□□□□ -1.93
SSM4YIL030C KIN28P06242 306 aa3□□□□□ -1.93
SSM4YIL030C IMG1P25626 169 aa3□□□□□ -1.93
SSM4YIL030C YKL097CP34245 136 aa3□□□□□ -1.93
SSM4YIL030C ABM1P47146 123 aa3□□□□□ -1.93
SSM4YIL030C SCW10Q04951 389 aa3□□□□□ -1.93
SSM4YIL030C HRT1Q08273 121 aa3□□□□□ -1.93
SSM4YIL030C ADH2P00331 348 aaKnown RBP3□□□□□ -1.93
SSM4YIL030C RPS25BP0C0T4 108 aaKnown RBP3□□□□□ -1.93
SSM4YIL030C MEK1P24719 497 aaPredicted RBP3□□□□□ -1.93
SSM4YIL030C SUA7P29055 345 aaPredicted RBP3□□□□□ -1.93
SSM4YIL030C ECM33P38248 429 aaKnown RBP3□□□□□ -1.93
SSM4YIL030C AIR1P40507 360 aaKnown RBP3□□□□□ -1.93
SSM4YIL030C YNR064CP53750 290 aa3□□□□□ -1.93
SSM4YIL030C YDR042CQ03205 200 aa3□□□□□ -1.93
SSM4YIL030C CSM4Q08955 156 aa3□□□□□ -1.93
SSM4YIL030C YPL162CQ12042 273 aa3□□□□□ -1.93
SSM4YIL030C RPS25AQ3E792 108 aaPredicted RBP3□□□□□ -1.93
SSM4YIL030C YDR034W-BQ6Q5X2 51 aa3□□□□□ -1.93
SSM4YIL030C CBP6P07253 162 aaPredicted RBP3□□□□□ -1.93
SSM4YIL030C AIM17P23180 465 aaKnown RBP3□□□□□ -1.93
SSM4YIL030C RPI1P23250 407 aaKnown RBP3□□□□□ -1.93
SSM4YIL030C TIP1P27654 210 aaPredicted RBP3□□□□□ -1.93
SSM4YIL030C RPS27AP35997 82 aaKnown RBP3□□□□□ -1.93
SSM4YIL030C SSH1P38353 490 aaKnown RBP3□□□□□ -1.93
SSM4YIL030C RPS27BP38711 82 aa3□□□□□ -1.93
SSM4YIL030C SEN15Q04675 128 aa3□□□□□ -1.93
SSM4YIL030C RPL12AP0CX53 165 aaKnown RBP2.99□□□□□ -1.93
SSM4YIL030C RPL12BP0CX54 165 aa2.99□□□□□ -1.93
SSM4YIL030C ARC19P33204 171 aaKnown RBP2.99□□□□□ -1.93
SSM4YIL030C OM14P38325 134 aa2.99□□□□□ -1.93
SSM4YIL030C PIC2P40035 300 aa2.99□□□□□ -1.93
SSM4YIL030C OST1P41543 476 aaKnown RBP2.99□□□□□ -1.93
SSM4YIL030C RPA43P46669 326 aa2.99□□□□□ -1.93
SSM4YIL030C YGR126WP53274 230 aa2.99□□□□□ -1.93
SSM4YIL030C YNR040WP53736 256 aa2.99□□□□□ -1.93
SSM4YIL030C YFT2Q06676 274 aa2.99□□□□□ -1.93
SSM4YIL030C NPC2Q12408 173 aa2.99□□□□□ -1.93
SSM4YIL030C RPS13P05756 151 aaKnown RBP2.99□□□□□ -1.93
SSM4YIL030C SOF1P33750 489 aaKnown RBP2.99□□□□□ -1.93
SSM4YIL030C CSH1P38287 376 aa2.99□□□□□ -1.93
SSM4YIL030C AME1P38313 324 aa2.99□□□□□ -1.93
SSM4YIL030C YJL213WP40896 331 aa2.99□□□□□ -1.93
SSM4YIL030C SAS2P40963 338 aa2.99□□□□□ -1.93
SSM4YIL030C YFR054CP43622 192 aa2.99□□□□□ -1.93
SSM4YIL030C HUT1Q12520 339 aa2.99□□□□□ -1.93
SSM4YIL030C CYC7P00045 113 aa2.99□□□□□ -1.93
SSM4YIL030C FUN14P18411 198 aa2.99□□□□□ -1.93
SSM4YIL030C SEC62P21825 274 aa2.99□□□□□ -1.93
SSM4YIL030C ROX3P25046 220 aa2.99□□□□□ -1.93
SSM4YIL030C YLR460CP54007 376 aa2.99□□□□□ -1.93
SSM4YIL030C TPT1Q12272 230 aaKnown RBP2.99□□□□□ -1.93
SSM4YIL030C YOR032W-AQ8TGS1 66 aa2.99□□□□□ -1.93
SSM4YIL030C DAL80P26343 269 aa2.98□□□□□ -1.93
SSM4YIL030C MGE1P38523 228 aa2.98□□□□□ -1.93
SSM4YIL030C YGP1P38616 354 aaKnown RBP2.98□□□□□ -1.93
SSM4YIL030C YHR180WP38868 163 aa2.98□□□□□ -1.93
SSM4YIL030C NAS2P40555 220 aa2.98□□□□□ -1.93
SSM4YIL030C ARP3P47117 449 aaKnown RBP2.98□□□□□ -1.93
SSM4YIL030C HST4P53688 370 aa2.98□□□□□ -1.93
SSM4YIL030C BET5Q03630 159 aa2.98□□□□□ -1.93
SSM4YIL030C DAL4Q04895 635 aa2.98□□□□□ -1.93
SSM4YIL030C DIC1Q06143 298 aa2.98□□□□□ -1.93
SSM4YIL030C YGL258W-AQ3E740 77 aa2.98□□□□□ -1.93
SSM4YIL030C RPL1AP0CX43 217 aaKnown RBP2.98□□□□□ -1.93
SSM4YIL030C RPL1BP0CX44 217 aaKnown RBP2.98□□□□□ -1.93
SSM4YIL030C TOM40P23644 387 aaKnown RBP2.98□□□□□ -1.93
SSM4YIL030C AGP1P25376 633 aa2.98□□□□□ -1.93
SSM4YIL030C GAT2P40209 560 aa2.98□□□□□ -1.93
SSM4YIL030C NIS1P53939 407 aa2.98□□□□□ -1.93
SSM4YIL030C CNL1Q06333 122 aa2.98□□□□□ -1.93
SSM4YIL030C POS5Q06892 414 aa2.98□□□□□ -1.93
SSM4YIL030C VPS63O13549 108 aa2.98□□□□□ -1.93
SSM4YIL030C SPO13P23624 291 aa2.98□□□□□ -1.93
SSM4YIL030C ERG3P32353 365 aa2.98□□□□□ -1.93
SSM4YIL030C YJR011CP47086 261 aaPredicted RBP2.98□□□□□ -1.93
SSM4YIL030C SUT1P53032 299 aaKnown RBP2.98□□□□□ -1.93
SSM4YIL030C SAE3P89114 91 aa2.98□□□□□ -1.93
SSM4YIL030C TRI1Q05024 226 aa2.98□□□□□ -1.93
SSM4YIL030C YLR112WQ12130 139 aa2.98□□□□□ -1.93
SSM4YIL030C TRP4P07285 380 aaPredicted RBP2.97□□□□□ -1.93
SSM4YIL030C MXR2P25566 168 aa2.97□□□□□ -1.93
SSM4YIL030C MOB1P40484 314 aa2.97□□□□□ -1.93
SSM4YIL030C IMP2P46972 177 aa2.97□□□□□ -1.93
SSM4YIL030C XPT1P47165 209 aa2.97□□□□□ -1.93
SSM4YIL030C DFG5Q05031 458 aa2.97□□□□□ -1.93
SSM4YIL030C MRL1Q06815 381 aa2.97□□□□□ -1.93
SSM4YIL030C YLR050CQ12155 161 aaKnown RBP2.97□□□□□ -1.93
SSM4YIL030C HUG1Q6Q5K6 68 aa2.97□□□□□ -1.93
SSM4YIL030C CDC36P06100 191 aaPredicted RBP2.97□□□□□ -1.93
SSM4YIL030C SWT21P53873 357 aaPredicted RBP2.97□□□□□ -1.93
SSM4YIL030C EKI1Q03764 534 aa2.97□□□□□ -1.93
SSM4YIL030C LPP1Q04396 274 aa2.97□□□□□ -1.93
SSM4YIL030C UPS1Q05776 175 aa2.97□□□□□ -1.93
SSM4YIL030C HEM13P11353 328 aaKnown RBP2.97□□□□□ -1.93
SSM4YIL030C PRE1P22141 198 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms