RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	BNA7	Q04066	261 aa		0.71	□□□□□ -2.3
SPO11	YHL022C	SKI6	P46948	246 aa	Predicted RBP	0.7	□□□□□ -2.3
SPO11	YHL022C	ALB1	P47019	175 aa	Predicted RBP	0.7	□□□□□ -2.3
SPO11	YHL022C	YMR295C	Q03559	197 aa		0.7	□□□□□ -2.3
SPO11	YHL022C	YMR226C	Q05016	267 aa	Known RBP	0.7	□□□□□ -2.3
SPO11	YHL022C	GGA1	Q06336	557 aa		0.7	□□□□□ -2.3
SPO11	YHL022C	YAR023C	D6VPM8	179 aa		0.69	□□□□□ -2.3
SPO11	YHL022C	STE18	P18852	110 aa		0.69	□□□□□ -2.3
SPO11	YHL022C	SPS18	P32572	300 aa		0.69	□□□□□ -2.3
SPO11	YHL022C	YCR087C-A	P37263	153 aa		0.69	□□□□□ -2.3
SPO11	YHL022C	NOP19	P53317	196 aa	Predicted RBP	0.69	□□□□□ -2.3
SPO11	YHL022C	YDR157W	A0A023PZE8	133 aa		0.68	□□□□□ -2.3
SPO11	YHL022C	CNB1	P25296	175 aa		0.68	□□□□□ -2.3
SPO11	YHL022C	ARO7	P32178	256 aa		0.68	□□□□□ -2.3
SPO11	YHL022C	PRP18	P33411	251 aa	Predicted RBP	0.68	□□□□□ -2.3
SPO11	YHL022C	SFK1	P35735	353 aa		0.68	□□□□□ -2.3
SPO11	YHL022C	CBT1	P36038	271 aa	Predicted RBP	0.68	□□□□□ -2.3
SPO11	YHL022C	AIM2	P39721	246 aa		0.68	□□□□□ -2.3
SPO11	YHL022C	CWC23	P52868	283 aa	Predicted RBP	0.68	□□□□□ -2.3
SPO11	YHL022C	YPR203W	Q08994	102 aa		0.68	□□□□□ -2.3
SPO11	YHL022C	YPR013C	Q12145	317 aa		0.68	□□□□□ -2.3
SPO11	YHL022C	SER2	P42941	309 aa		0.67	□□□□□ -2.3
SPO11	YHL022C	RAD17	P48581	401 aa		0.67	□□□□□ -2.3
SPO11	YHL022C	CDC33	P07260	213 aa	Known RBP	0.66	□□□□□ -2.3
SPO11	YHL022C	YBR242W	P38331	238 aa		0.66	□□□□□ -2.3
SPO11	YHL022C	MTW1	P39731	289 aa		0.66	□□□□□ -2.3
SPO11	YHL022C	SHH3	Q04487	196 aa		0.66	□□□□□ -2.3
SPO11	YHL022C	FUS2	Q05670	677 aa		0.66	□□□□□ -2.3
SPO11	YHL022C	SEN2	P16658	377 aa		0.65	□□□□□ -2.31
SPO11	YHL022C	COQ1	P18900	473 aa		0.65	□□□□□ -2.31
SPO11	YHL022C	YMR099C	Q03161	297 aa	Known RBP	0.65	□□□□□ -2.31
SPO11	YHL022C	FMP49	A0A023PZB3	126 aa		0.64	□□□□□ -2.31
SPO11	YHL022C	GSP2	P32836	220 aa	Known RBP	0.64	□□□□□ -2.31
SPO11	YHL022C	AHT1	P29589	182 aa		0.63	□□□□□ -2.31
SPO11	YHL022C	IKI1	P38874	309 aa		0.63	□□□□□ -2.31
SPO11	YHL022C	YIL102C	P40488	101 aa		0.63	□□□□□ -2.31
SPO11	YHL022C	ARP3	P47117	449 aa	Known RBP	0.63	□□□□□ -2.31
SPO11	YHL022C	YNL033W	P53964	284 aa		0.63	□□□□□ -2.31
SPO11	YHL022C	MET31	Q03081	177 aa		0.63	□□□□□ -2.31
SPO11	YHL022C	MBF1	O14467	151 aa	Known RBP	0.62	□□□□□ -2.31
SPO11	YHL022C	TAF14	P35189	244 aa		0.62	□□□□□ -2.31
SPO11	YHL022C	PAM17	P36147	197 aa		0.62	□□□□□ -2.31
SPO11	YHL022C	YHL037C	P38733	133 aa		0.62	□□□□□ -2.31
SPO11	YHL022C	MSS2	P40990	351 aa		0.62	□□□□□ -2.31
SPO11	YHL022C	GET4	Q12125	312 aa		0.62	□□□□□ -2.31
SPO11	YHL022C	TAR1	Q8TGM6	124 aa		0.62	□□□□□ -2.31
SPO11	YHL022C	MGT1	P26188	188 aa		0.61	□□□□□ -2.31
SPO11	YHL022C	ASF2	P32448	525 aa	Predicted RBP	0.61	□□□□□ -2.31
SPO11	YHL022C	MAK5	P38112	773 aa	Predicted RBP	0.61	□□□□□ -2.31
SPO11	YHL022C	ABP140	Q08641	628 aa	Known RBP	0.61	□□□□□ -2.31
SPO11	YHL022C	CCW12	Q12127	133 aa		0.61	□□□□□ -2.31
SPO11	YHL022C	SNF4	P12904	322 aa		0.6	□□□□□ -2.31
SPO11	YHL022C	CUP9	P41817	306 aa		0.6	□□□□□ -2.31
SPO11	YHL022C	YLR036C	Q07986	203 aa		0.6	□□□□□ -2.31
SPO11	YHL022C	FYV12	Q08559	129 aa		0.6	□□□□□ -2.31
SPO11	YHL022C	TIR1	P10863	254 aa		0.59	□□□□□ -2.31
SPO11	YHL022C	RFA3	P26755	122 aa	Known RBP	0.59	□□□□□ -2.31
SPO11	YHL022C	RFC4	P40339	323 aa	Known RBP	0.59	□□□□□ -2.31
SPO11	YHL022C	YFL051C	P43552	160 aa		0.59	□□□□□ -2.31
SPO11	YHL022C	VPS71	Q03433	280 aa		0.59	□□□□□ -2.31
SPO11	YHL022C	RRP17	Q04031	235 aa	Predicted RBP	0.59	□□□□□ -2.31
SPO11	YHL022C	YCR023C	P25351	611 aa		0.58	□□□□□ -2.32
SPO11	YHL022C	PDS1	P40316	373 aa	Predicted RBP	0.58	□□□□□ -2.32
SPO11	YHL022C	GCN20	P43535	752 aa	Known RBP	0.58	□□□□□ -2.32
SPO11	YHL022C	YMR253C	Q04835	414 aa		0.58	□□□□□ -2.32
SPO11	YHL022C	NAT3	Q06504	195 aa		0.58	□□□□□ -2.32
SPO11	YHL022C	YOL014W	Q08110	124 aa		0.58	□□□□□ -2.32
SPO11	YHL022C	PST2	Q12335	198 aa	Known RBP	0.58	□□□□□ -2.32
SPO11	YHL022C	STF2	P16965	84 aa		0.57	□□□□□ -2.32
SPO11	YHL022C	IDP1	P21954	428 aa	Known RBP	0.57	□□□□□ -2.32
SPO11	YHL022C	YAR064W	P39563	99 aa		0.57	□□□□□ -2.32
SPO11	YHL022C	DCV1	P43595	202 aa		0.57	□□□□□ -2.32
SPO11	YHL022C	FIT1	Q04433	528 aa		0.57	□□□□□ -2.32
SPO11	YHL022C	YMR315W	Q04869	349 aa	Known RBP	0.57	□□□□□ -2.32
SPO11	YHL022C	YLR031W	Q07978	186 aa		0.57	□□□□□ -2.32
SPO11	YHL022C	YML100W-A	Q8TGT0	57 aa		0.57	□□□□□ -2.32
SPO11	YHL022C	SPC25	P40014	221 aa		0.56	□□□□□ -2.32
SPO11	YHL022C	ADF1	Q2V2Q1	113 aa		0.56	□□□□□ -2.32
SPO11	YHL022C	PRP8	P33334	2413 aa	Known RBP	0.55	□□□□□ -2.32
SPO11	YHL022C	MRS1	P07266	363 aa		0.55	□□□□□ -2.32
SPO11	YHL022C	YBL010C	P32788	280 aa		0.55	□□□□□ -2.32
SPO11	YHL022C	FMP23	P38231	175 aa		0.55	□□□□□ -2.32
SPO11	YHL022C	TDA4	P47153	279 aa		0.55	□□□□□ -2.32
SPO11	YHL022C	YOR015W	Q12169	119 aa		0.55	□□□□□ -2.32
SPO11	YHL022C	TMA22	P47089	198 aa	Predicted RBP	0.54	□□□□□ -2.32
SPO11	YHL022C	YJR111C	P47148	283 aa	Known RBP	0.54	□□□□□ -2.32
SPO11	YHL022C	SBH2	P52871	88 aa		0.54	□□□□□ -2.32
SPO11	YHL022C	HTB1	P02293	131 aa	Known RBP	0.53	□□□□□ -2.32
SPO11	YHL022C	HTB2	P02294	131 aa		0.53	□□□□□ -2.32
SPO11	YHL022C	ETR1	P38071	380 aa		0.53	□□□□□ -2.32
SPO11	YHL022C	MPM1	P40364	252 aa		0.53	□□□□□ -2.32
SPO11	YHL022C	PGA2	P53903	129 aa		0.53	□□□□□ -2.32
SPO11	YHL022C	YFL019C	P43576	117 aa		0.52	□□□□□ -2.33
SPO11	YHL022C	YGL235W	P53071	178 aa		0.52	□□□□□ -2.33
SPO11	YHL022C	RUD3	Q12234	484 aa	Known RBP	0.52	□□□□□ -2.33
SPO11	YHL022C	ARG80	P07249	177 aa		0.51	□□□□□ -2.33
SPO11	YHL022C	RPS24A	P0CX31	135 aa	Known RBP	0.51	□□□□□ -2.33
SPO11	YHL022C	RPS24B	P0CX32	135 aa	Known RBP	0.51	□□□□□ -2.33
SPO11	YHL022C	YJR015W	P47090	510 aa		0.51	□□□□□ -2.33
SPO11	YHL022C	MMS2	P53152	137 aa		0.51	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 170 ms