RNA–Protein interactions for RNA: YDR400W

URH1, Transcript of Uridine nucleosidase (uridine-cytidine N-ribohydrolase), yeast

Gene URH1, Length 1,023 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URH1	YDR400W	YBL010C	P32788	280 aa		5.81	□□□□□ -1.48
URH1	YDR400W	DAD2	P36162	133 aa		5.81	□□□□□ -1.48
URH1	YDR400W	GNA1	P43577	159 aa	Predicted RBP	5.81	□□□□□ -1.48
URH1	YDR400W	CAB5	Q03941	241 aa		5.81	□□□□□ -1.48
URH1	YDR400W	YDR391C	Q04170	232 aa		5.81	□□□□□ -1.48
URH1	YDR400W	BER1	Q06688	274 aa	Known RBP	5.81	□□□□□ -1.48
URH1	YDR400W	YCT1	Q12235	531 aa		5.81	□□□□□ -1.48
URH1	YDR400W	IZH2	Q12442	317 aa		5.81	□□□□□ -1.48
URH1	YDR400W	YLR365W	Q7LIF2	110 aa		5.81	□□□□□ -1.48
URH1	YDR400W	RPL12A	P0CX53	165 aa	Known RBP	5.8	□□□□□ -1.48
URH1	YDR400W	RPL12B	P0CX54	165 aa		5.8	□□□□□ -1.48
URH1	YDR400W	LDB16	P25587	256 aa		5.8	□□□□□ -1.48
URH1	YDR400W	ATG15	P25641	520 aa		5.8	□□□□□ -1.48
URH1	YDR400W	DEG1	P31115	442 aa	Known RBP	5.8	□□□□□ -1.48
URH1	YDR400W	OCH1	P31755	480 aa		5.8	□□□□□ -1.48
URH1	YDR400W	SWD2	P36104	329 aa	Predicted RBP	5.8	□□□□□ -1.48
URH1	YDR400W	FIG1	P38224	298 aa		5.8	□□□□□ -1.48
URH1	YDR400W	YJL016W	P47072	561 aa		5.8	□□□□□ -1.48
URH1	YDR400W	ACT1	P60010	375 aa	Known RBP	5.8	□□□□□ -1.48
URH1	YDR400W	YDR286C	Q05530	114 aa		5.8	□□□□□ -1.48
URH1	YDR400W	YFH1	Q07540	174 aa		5.8	□□□□□ -1.48
URH1	YDR400W	RRT7	Q07829	113 aa		5.8	□□□□□ -1.48
URH1	YDR400W	Q0144	Q9ZZW2	109 aa		5.8	□□□□□ -1.48
URH1	YDR400W	SAG1	P20840	650 aa		5.79	□□□□□ -1.48
URH1	YDR400W	RPB7	P34087	171 aa		5.79	□□□□□ -1.48
URH1	YDR400W	YBL059W	P34224	193 aa		5.79	□□□□□ -1.48
URH1	YDR400W	COS8	P38723	381 aa		5.79	□□□□□ -1.48
URH1	YDR400W	PET100	P38958	111 aa		5.79	□□□□□ -1.48
URH1	YDR400W	CCS1	P40202	249 aa	Known RBP	5.79	□□□□□ -1.48
URH1	YDR400W	RPL13B	P40212	199 aa	Known RBP	5.79	□□□□□ -1.48
URH1	YDR400W	AGX1	P43567	385 aa		5.79	□□□□□ -1.48
URH1	YDR400W	HRI1	Q05905	244 aa	Known RBP	5.79	□□□□□ -1.48
URH1	YDR400W	RFU1	Q08003	200 aa		5.79	□□□□□ -1.48
URH1	YDR400W	FRE8	Q12209	686 aa		5.79	□□□□□ -1.48
URH1	YDR400W	RPL13A	Q12690	199 aa	Predicted RBP	5.79	□□□□□ -1.48
URH1	YDR400W	TDH1	P00360	332 aa	Known RBP	5.78	□□□□□ -1.48
URH1	YDR400W	YLL053C	P0CD98	152 aa		5.78	□□□□□ -1.48
URH1	YDR400W	YCR101C	P25607	182 aa		5.78	□□□□□ -1.48
URH1	YDR400W	LDS1	P31379	325 aa		5.78	□□□□□ -1.48
URH1	YDR400W	MRPS5	P33759	307 aa		5.78	□□□□□ -1.48
URH1	YDR400W	MRPL39	P36533	70 aa		5.78	□□□□□ -1.48
URH1	YDR400W	RPA34	P47006	233 aa	Predicted RBP	5.78	□□□□□ -1.48
URH1	YDR400W	SNN1	P48232	102 aa		5.78	□□□□□ -1.48
URH1	YDR400W	VPS28	Q02767	242 aa		5.78	□□□□□ -1.48
URH1	YDR400W	YDL180W	Q12301	547 aa		5.78	□□□□□ -1.48
URH1	YDR400W	MED4	Q12343	284 aa		5.78	□□□□□ -1.48
URH1	YDR400W	YLR146W-A	Q2V2P1	62 aa		5.78	□□□□□ -1.48
URH1	YDR400W	YPR108W-A	Q3E7B3	70 aa		5.78	□□□□□ -1.48
URH1	YDR400W	IRA2	P19158	3079 aa		5.78	□□□□□ -1.48
URH1	YDR400W	HHF1	P02309	103 aa	Known RBP	5.77	□□□□□ -1.49
URH1	YDR400W	SSA3	P09435	649 aa	Known RBP	5.77	□□□□□ -1.49
URH1	YDR400W	UBI4	P0CG63	381 aa	Known RBP	5.77	□□□□□ -1.49
URH1	YDR400W	RPL40A	P0CH08	128 aa	Known RBP	5.77	□□□□□ -1.49
URH1	YDR400W	RPL40B	P0CH09	128 aa	Known RBP	5.77	□□□□□ -1.49
URH1	YDR400W	MSI1	P13712	422 aa		5.77	□□□□□ -1.49
URH1	YDR400W	MRS4	P23500	304 aa		5.77	□□□□□ -1.49
URH1	YDR400W	SRB6	P32570	121 aa		5.77	□□□□□ -1.49
URH1	YDR400W	SWD3	P38123	315 aa		5.77	□□□□□ -1.49
URH1	YDR400W	AVT5	P38176	459 aa		5.77	□□□□□ -1.49
URH1	YDR400W	YEA6	P39953	335 aa		5.77	□□□□□ -1.49
URH1	YDR400W	CWC25	P53854	179 aa	Known RBP	5.77	□□□□□ -1.49
URH1	YDR400W	FMP41	P53889	259 aa	Known RBP	5.77	□□□□□ -1.49
URH1	YDR400W	RSM10	Q03201	203 aa		5.77	□□□□□ -1.49
URH1	YDR400W	SDO1	Q07953	250 aa	Known RBP	5.77	□□□□□ -1.49
URH1	YDR400W	YOR186W	Q08560	144 aa		5.77	□□□□□ -1.49
URH1	YDR400W	MPD1	Q12404	318 aa	Known RBP	5.77	□□□□□ -1.49
URH1	YDR400W	VMA9	Q3E7B6	73 aa		5.77	□□□□□ -1.49
URH1	YDR400W	RPS8A	P0CX39	200 aa	Known RBP	5.76	□□□□□ -1.49
URH1	YDR400W	RPS8B	P0CX40	200 aa	Known RBP	5.76	□□□□□ -1.49
URH1	YDR400W	ZRC1	P20107	442 aa		5.76	□□□□□ -1.49
URH1	YDR400W	ERG2	P32352	222 aa		5.76	□□□□□ -1.49
URH1	YDR400W	YKL162C	P36052	402 aa		5.76	□□□□□ -1.49
URH1	YDR400W	YER084W	P40057	128 aa		5.76	□□□□□ -1.49
URH1	YDR400W	EMC5	P40540	141 aa		5.76	□□□□□ -1.49
URH1	YDR400W	SOL1	P50278	321 aa		5.76	□□□□□ -1.49
URH1	YDR400W	SLX9	P53251	210 aa	Predicted RBP	5.76	□□□□□ -1.49
URH1	YDR400W	APJ1	P53940	528 aa		5.76	□□□□□ -1.49
URH1	YDR400W	YCL001W-A	P87012	153 aa		5.76	□□□□□ -1.49
URH1	YDR400W	RCE1	Q03530	315 aa		5.76	□□□□□ -1.49
URH1	YDR400W	RPL25	P04456	142 aa	Known RBP	5.75	□□□□□ -1.49
URH1	YDR400W	MNS1	P32906	549 aa		5.75	□□□□□ -1.49
URH1	YDR400W	YUH1	P35127	236 aa		5.75	□□□□□ -1.49
URH1	YDR400W	MCH2	P36032	473 aa		5.75	□□□□□ -1.49
URH1	YDR400W	YEA4	P40004	342 aa		5.75	□□□□□ -1.49
URH1	YDR400W	YJR012C	P47087	207 aa		5.75	□□□□□ -1.49
URH1	YDR400W	RRS1	Q08746	203 aa	Known RBP	5.75	□□□□□ -1.49
URH1	YDR400W	HUG1	Q6Q5K6	68 aa		5.75	□□□□□ -1.49
URH1	YDR400W	IRA1	P18963	3092 aa		5.75	□□□□□ -1.49
URH1	YDR400W	YMR262W	P38430	313 aa		5.74	□□□□□ -1.49
URH1	YDR400W	PRS2	P38620	318 aa	Known RBP	5.74	□□□□□ -1.49
URH1	YDR400W	SPC25	P40014	221 aa		5.74	□□□□□ -1.49
URH1	YDR400W	YIL029C	P40538	142 aa		5.74	□□□□□ -1.49
URH1	YDR400W	MRX5	P47007	382 aa		5.74	□□□□□ -1.49
URH1	YDR400W	MCM22	P47167	239 aa		5.74	□□□□□ -1.49
URH1	YDR400W	ERV25	P54837	211 aa	Known RBP	5.74	□□□□□ -1.49
URH1	YDR400W	YMR279C	Q03263	540 aa		5.74	□□□□□ -1.49
URH1	YDR400W	YMR082C	Q04276	118 aa		5.74	□□□□□ -1.49
URH1	YDR400W	PIN3	Q06449	215 aa		5.74	□□□□□ -1.49
URH1	YDR400W	RAF1	Q06891	181 aa		5.74	□□□□□ -1.49
URH1	YDR400W	FIT3	Q08907	204 aa		5.74	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 75.4 ms