RNA–Protein interactions for RNA: YDR320C

SWA2, Transcript of Auxilin-like protein involved in vesicular transport, yeastyeast

Gene SWA2, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWA2YDR320C DLS1P40366 167 aa2□□□□□ -2.09
SWA2YDR320C OST1P41543 476 aaKnown RBP2□□□□□ -2.09
SWA2YDR320C YFR054CP43622 192 aa2□□□□□ -2.09
SWA2YDR320C BUD13P46947 266 aaPredicted RBP2□□□□□ -2.09
SWA2YDR320C OST2P46964 130 aa2□□□□□ -2.09
SWA2YDR320C LCB3P47013 409 aa2□□□□□ -2.09
SWA2YDR320C COS10P52924 374 aa2□□□□□ -2.09
SWA2YDR320C YGR018CP53211 109 aa2□□□□□ -2.09
SWA2YDR320C HHO1P53551 258 aa2□□□□□ -2.09
SWA2YDR320C VPS71Q03433 280 aa2□□□□□ -2.09
SWA2YDR320C YPL245WQ12179 454 aaKnown RBP2□□□□□ -2.09
SWA2YDR320C ROM2P51862 1356 aaKnown RBP2□□□□□ -2.09
SWA2YDR320C VAR1P02381 398 aa2□□□□□ -2.09
SWA2YDR320C RPL15AP05748 204 aaKnown RBP2□□□□□ -2.09
SWA2YDR320C RPS18AP0CX55 146 aaKnown RBP2□□□□□ -2.09
SWA2YDR320C RPS18BP0CX56 146 aaPredicted RBP2□□□□□ -2.09
SWA2YDR320C PTC1P35182 281 aa2□□□□□ -2.09
SWA2YDR320C ASK1P35734 292 aa2□□□□□ -2.09
SWA2YDR320C MED6P38782 295 aa2□□□□□ -2.09
SWA2YDR320C AST2P39945 430 aaKnown RBP2□□□□□ -2.09
SWA2YDR320C CAT5P41735 233 aa2□□□□□ -2.09
SWA2YDR320C FIP1P45976 327 aa2□□□□□ -2.09
SWA2YDR320C YAE1P47118 141 aaPredicted RBP2□□□□□ -2.09
SWA2YDR320C TTI2P47168 421 aa2□□□□□ -2.09
SWA2YDR320C SDS23P53172 527 aa2□□□□□ -2.09
SWA2YDR320C TDA7P53882 636 aaPredicted RBP2□□□□□ -2.09
SWA2YDR320C RPL15BP54780 204 aaPredicted RBP2□□□□□ -2.09
SWA2YDR320C ADD37Q03233 198 aa2□□□□□ -2.09
SWA2YDR320C YMR253CQ04835 414 aa2□□□□□ -2.09
SWA2YDR320C ATP16Q12165 160 aa2□□□□□ -2.09
SWA2YDR320C YLR118CQ12354 227 aa2□□□□□ -2.09
SWA2YDR320C TFC7Q12415 435 aa2□□□□□ -2.09
SWA2YDR320C HTZ1Q12692 134 aaKnown RBP2□□□□□ -2.09
SWA2YDR320C YAL063C-AQ3E791 96 aa2□□□□□ -2.09
SWA2YDR320C FMP49A0A023PZB3 126 aa1.99□□□□□ -2.09
SWA2YDR320C Q0255P03881 472 aa1.99□□□□□ -2.09
SWA2YDR320C PIS1P06197 220 aaKnown RBP1.99□□□□□ -2.09
SWA2YDR320C YER039C-AP0CD97 72 aa1.99□□□□□ -2.09
SWA2YDR320C MAG1P22134 296 aaKnown RBP1.99□□□□□ -2.09
SWA2YDR320C SNC2P33328 115 aa1.99□□□□□ -2.09
SWA2YDR320C POP8P38208 133 aa1.99□□□□□ -2.09
SWA2YDR320C COX14P39103 70 aa1.99□□□□□ -2.09
SWA2YDR320C AIM2P39721 246 aa1.99□□□□□ -2.09
SWA2YDR320C EDC2P40023 145 aaPredicted RBP1.99□□□□□ -2.09
SWA2YDR320C YNL200CP40165 246 aaKnown RBP1.99□□□□□ -2.09
SWA2YDR320C SFT1P43682 97 aa1.99□□□□□ -2.09
SWA2YDR320C YGL088WP53151 121 aa1.99□□□□□ -2.09
SWA2YDR320C YGR039WP53225 103 aa1.99□□□□□ -2.09
SWA2YDR320C YDR366CP87287 132 aa1.99□□□□□ -2.09
SWA2YDR320C AIM36Q03798 255 aa1.99□□□□□ -2.09
SWA2YDR320C RRG7Q08774 242 aaPredicted RBP1.99□□□□□ -2.09
SWA2YDR320C SCP1Q08873 200 aa1.99□□□□□ -2.09
SWA2YDR320C MHP1P43638 1398 aa1.99□□□□□ -2.09
SWA2YDR320C YMR316C-AI2HB70 103 aa1.98□□□□□ -2.09
SWA2YDR320C SPS2P08459 502 aa1.98□□□□□ -2.09
SWA2YDR320C NOP1P15646 327 aaKnown RBP1.98□□□□□ -2.09
SWA2YDR320C BGL2P15703 313 aaKnown RBP1.98□□□□□ -2.09
SWA2YDR320C CKS1P20486 150 aaKnown RBP1.98□□□□□ -2.09
SWA2YDR320C SPT14P32363 452 aa1.98□□□□□ -2.09
SWA2YDR320C SEC17P32602 292 aa1.98□□□□□ -2.09
SWA2YDR320C RPL14AP36105 138 aaKnown RBP1.98□□□□□ -2.09
SWA2YDR320C UTP30P36144 274 aaKnown RBP1.98□□□□□ -2.09
SWA2YDR320C YPT31P38555 223 aaKnown RBP1.98□□□□□ -2.09
SWA2YDR320C RPL14BP38754 138 aaKnown RBP1.98□□□□□ -2.09
SWA2YDR320C AIM18P38884 321 aa1.98□□□□□ -2.09
SWA2YDR320C PTI1P39927 425 aaPredicted RBP1.98□□□□□ -2.09
SWA2YDR320C SKI6P46948 246 aaPredicted RBP1.98□□□□□ -2.09
SWA2YDR320C MDM34P53083 459 aa1.98□□□□□ -2.09
SWA2YDR320C SCW4P53334 386 aaKnown RBP1.98□□□□□ -2.09
SWA2YDR320C PIR3Q03180 325 aa1.98□□□□□ -2.09
SWA2YDR320C GRH1Q04410 372 aaKnown RBP1.98□□□□□ -2.09
SWA2YDR320C YLR042CQ07990 161 aa1.98□□□□□ -2.09
SWA2YDR320C FCF2Q12035 217 aaPredicted RBP1.98□□□□□ -2.09
SWA2YDR320C TSC3Q3E790 80 aa1.98□□□□□ -2.09
SWA2YDR320C YFR032C-BQ8TGU2 87 aa1.98□□□□□ -2.09
SWA2YDR320C YGL041W-AP0C5N3 154 aa1.98□□□□□ -2.09
SWA2YDR320C ETR1P38071 380 aa1.98□□□□□ -2.09
SWA2YDR320C RPF1P38805 295 aaKnown RBP1.98□□□□□ -2.09
SWA2YDR320C LSM12P38828 187 aaKnown RBP1.98□□□□□ -2.09
SWA2YDR320C YHR140WP38842 239 aa1.98□□□□□ -2.09
SWA2YDR320C GGC1P38988 300 aa1.98□□□□□ -2.09
SWA2YDR320C MOB1P40484 314 aa1.98□□□□□ -2.09
SWA2YDR320C MIC19P43594 170 aa1.98□□□□□ -2.09
SWA2YDR320C VPS28Q02767 242 aa1.98□□□□□ -2.09
SWA2YDR320C NHP10Q03435 203 aa1.98□□□□□ -2.09
SWA2YDR320C GOT1Q03554 138 aa1.98□□□□□ -2.09
SWA2YDR320C YTH1Q06102 208 aaPredicted RBP1.98□□□□□ -2.09
SWA2YDR320C YPS3Q12303 508 aa1.98□□□□□ -2.09
SWA2YDR320C ATO3Q12359 275 aa1.98□□□□□ -2.09
SWA2YDR320C NUP192P47054 1683 aa1.97□□□□□ -2.09
SWA2YDR320C RPS8AP0CX39 200 aaKnown RBP1.97□□□□□ -2.09
SWA2YDR320C RPS8BP0CX40 200 aaKnown RBP1.97□□□□□ -2.09
SWA2YDR320C SHB17P36136 271 aaKnown RBP1.97□□□□□ -2.09
SWA2YDR320C MRPL15P36523 253 aa1.97□□□□□ -2.09
SWA2YDR320C SMP1P38128 452 aa1.97□□□□□ -2.09
SWA2YDR320C YER181CP40097 107 aa1.97□□□□□ -2.09
SWA2YDR320C DIE2P50076 525 aa1.97□□□□□ -2.09
SWA2YDR320C AIF1P52923 378 aa1.97□□□□□ -2.09
SWA2YDR320C YPR114WQ06107 315 aa1.97□□□□□ -2.09
SWA2YDR320C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms