RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C MRPL27P36526 146 aaPredicted RBP3.79□□□□□ -1.8
NUP42YDR192C YHR122WP38829 231 aa3.79□□□□□ -1.8
NUP42YDR192C PTI1P39927 425 aaPredicted RBP3.79□□□□□ -1.8
NUP42YDR192C YNL208WP40159 199 aaKnown RBP3.79□□□□□ -1.8
NUP42YDR192C YGL159WP53110 370 aa3.79□□□□□ -1.8
NUP42YDR192C ERV25P54837 211 aaKnown RBP3.79□□□□□ -1.8
NUP42YDR192C RCE1Q03530 315 aa3.79□□□□□ -1.8
NUP42YDR192C YDR391CQ04170 232 aa3.79□□□□□ -1.8
NUP42YDR192C VBA1Q04301 562 aa3.79□□□□□ -1.8
NUP42YDR192C BER1Q06688 274 aaKnown RBP3.79□□□□□ -1.8
NUP42YDR192C YPL278CQ08990 100 aa3.79□□□□□ -1.8
NUP42YDR192C FCY22Q12119 530 aa3.79□□□□□ -1.8
NUP42YDR192C PET20Q99373 253 aa3.79□□□□□ -1.8
NUP42YDR192C COX5BP00425 151 aa3.78□□□□□ -1.8
NUP42YDR192C SSA3P09435 649 aaKnown RBP3.78□□□□□ -1.8
NUP42YDR192C VMA5P31412 392 aaKnown RBP3.78□□□□□ -1.8
NUP42YDR192C SHG1P38337 142 aa3.78□□□□□ -1.8
NUP42YDR192C COS8P38723 381 aa3.78□□□□□ -1.8
NUP42YDR192C LSM12P38828 187 aaKnown RBP3.78□□□□□ -1.8
NUP42YDR192C ADO1P47143 340 aaKnown RBP3.78□□□□□ -1.8
NUP42YDR192C YGR042WP53227 271 aa3.78□□□□□ -1.8
NUP42YDR192C YPL067CQ02754 198 aa3.78□□□□□ -1.8
NUP42YDR192C YDR248CQ03786 193 aa3.78□□□□□ -1.8
NUP42YDR192C YDR102CQ03864 110 aa3.78□□□□□ -1.8
NUP42YDR192C CAB5Q03941 241 aa3.78□□□□□ -1.8
NUP42YDR192C YPR098CQ06089 161 aa3.78□□□□□ -1.8
NUP42YDR192C GAS2Q06135 555 aa3.78□□□□□ -1.8
NUP42YDR192C NMA1Q06178 401 aaKnown RBP3.78□□□□□ -1.8
NUP42YDR192C NOC4Q06512 552 aaPredicted RBP3.78□□□□□ -1.8
NUP42YDR192C MED4Q12343 284 aa3.78□□□□□ -1.8
NUP42YDR192C CDC28P00546 298 aaKnown RBP3.77□□□□□ -1.81
NUP42YDR192C PUT1P09368 476 aa3.77□□□□□ -1.81
NUP42YDR192C SEN2P16658 377 aa3.77□□□□□ -1.81
NUP42YDR192C FUS3P16892 353 aaKnown RBP3.77□□□□□ -1.81
NUP42YDR192C SAG1P20840 650 aa3.77□□□□□ -1.81
NUP42YDR192C RPL16AP26784 199 aaKnown RBP3.77□□□□□ -1.81
NUP42YDR192C TRR1P29509 319 aaKnown RBP3.77□□□□□ -1.81
NUP42YDR192C YUH1P35127 236 aa3.77□□□□□ -1.81
NUP42YDR192C PRS2P38620 318 aaKnown RBP3.77□□□□□ -1.81
NUP42YDR192C RTC3P38804 111 aaPredicted RBP3.77□□□□□ -1.81
NUP42YDR192C CCS1P40202 249 aaKnown RBP3.77□□□□□ -1.81
NUP42YDR192C PAM16P42949 149 aa3.77□□□□□ -1.81
NUP42YDR192C ORM1P53224 222 aa3.77□□□□□ -1.81
NUP42YDR192C FMP48P53233 369 aa3.77□□□□□ -1.81
NUP42YDR192C LIP2Q06005 328 aa3.77□□□□□ -1.81
NUP42YDR192C PIN3Q06449 215 aa3.77□□□□□ -1.81
NUP42YDR192C PAM18Q07914 168 aa3.77□□□□□ -1.81
NUP42YDR192C FCF2Q12035 217 aaPredicted RBP3.77□□□□□ -1.81
NUP42YDR192C AIM45Q12480 344 aaKnown RBP3.77□□□□□ -1.81
NUP42YDR192C UBA3Q99344 299 aa3.77□□□□□ -1.81
NUP42YDR192C ADH2P00331 348 aaKnown RBP3.76□□□□□ -1.81
NUP42YDR192C YEL045CP32616 141 aa3.76□□□□□ -1.81
NUP42YDR192C SRY1P36007 326 aa3.76□□□□□ -1.81
NUP42YDR192C MCH2P36032 473 aa3.76□□□□□ -1.81
NUP42YDR192C ECM31P38122 312 aa3.76□□□□□ -1.81
NUP42YDR192C VMA7P39111 118 aa3.76□□□□□ -1.81
NUP42YDR192C YER137CP40083 148 aaKnown RBP3.76□□□□□ -1.81
NUP42YDR192C OTU1P43558 301 aa3.76□□□□□ -1.81
NUP42YDR192C YHC3P47040 408 aa3.76□□□□□ -1.81
NUP42YDR192C ABM1P47146 123 aa3.76□□□□□ -1.81
NUP42YDR192C UFD1P53044 361 aa3.76□□□□□ -1.81
NUP42YDR192C NIF3P53081 288 aa3.76□□□□□ -1.81
NUP42YDR192C YGL114WP53134 725 aa3.76□□□□□ -1.81
NUP42YDR192C NSA1P53136 463 aaPredicted RBP3.76□□□□□ -1.81
NUP42YDR192C SLX9P53251 210 aaPredicted RBP3.76□□□□□ -1.81
NUP42YDR192C DID2P69771 204 aa3.76□□□□□ -1.81
NUP42YDR192C YDC1Q02896 317 aa3.76□□□□□ -1.81
NUP42YDR192C UPS1Q05776 175 aa3.76□□□□□ -1.81
NUP42YDR192C RRS1Q08746 203 aaKnown RBP3.76□□□□□ -1.81
NUP42YDR192C ATG31Q12421 196 aa3.76□□□□□ -1.81
NUP42YDR192C ATG40Q99325 256 aa3.76□□□□□ -1.81
NUP42YDR192C CYR1P08678 2026 aaKnown RBP3.76□□□□□ -1.81
NUP42YDR192C QCR2P07257 368 aa3.75□□□□□ -1.81
NUP42YDR192C RPL43AP0CX25 92 aaKnown RBP3.75□□□□□ -1.81
NUP42YDR192C RPL43BP0CX26 92 aa3.75□□□□□ -1.81
NUP42YDR192C GRX2P17695 143 aaKnown RBP3.75□□□□□ -1.81
NUP42YDR192C CLB6P32943 380 aa3.75□□□□□ -1.81
NUP42YDR192C YMR262WP38430 313 aa3.75□□□□□ -1.81
NUP42YDR192C PRS3P38689 320 aaKnown RBP3.75□□□□□ -1.81
NUP42YDR192C PET100P38958 111 aa3.75□□□□□ -1.81
NUP42YDR192C KEG1P43614 200 aa3.75□□□□□ -1.81
NUP42YDR192C MRX5P47007 382 aa3.75□□□□□ -1.81
NUP42YDR192C SIP18P50263 79 aa3.75□□□□□ -1.81
NUP42YDR192C SOL1P50278 321 aa3.75□□□□□ -1.81
NUP42YDR192C UBC12P52491 188 aa3.75□□□□□ -1.81
NUP42YDR192C JAC1P53193 184 aa3.75□□□□□ -1.81
NUP42YDR192C ECM18Q04623 453 aa3.75□□□□□ -1.81
NUP42YDR192C YOR186WQ08560 144 aa3.75□□□□□ -1.81
NUP42YDR192C YLR365WQ7LIF2 110 aa3.75□□□□□ -1.81
NUP42YDR192C FLO9P39712 1322 aa3.74□□□□□ -1.81
NUP42YDR192C HEM4P06174 275 aa3.74□□□□□ -1.81
NUP42YDR192C YLL053CP0CD98 152 aa3.74□□□□□ -1.81
NUP42YDR192C MIR1P23641 311 aaKnown RBP3.74□□□□□ -1.81
NUP42YDR192C ARO4P32449 370 aaKnown RBP3.74□□□□□ -1.81
NUP42YDR192C PDC2P32896 925 aa3.74□□□□□ -1.81
NUP42YDR192C SWD3P38123 315 aa3.74□□□□□ -1.81
NUP42YDR192C POP8P38208 133 aa3.74□□□□□ -1.81
NUP42YDR192C ERV15P38312 142 aa3.74□□□□□ -1.81
NUP42YDR192C ASP1P38986 381 aaPredicted RBP3.74□□□□□ -1.81
NUP42YDR192C SSO2P39926 295 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms