RNA–Protein interactions for RNA: YDL228C

YDL228C, Transcript of Dubious open reading frame, yeastyeast

Gene YDL228C, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDL228CYDL228C VBA1Q04301 562 aa3.24□□□□□ -1.89
YDL228CYDL228C SPG4Q04438 115 aa3.24□□□□□ -1.89
YDL228CYDL228C SCP1Q08873 200 aa3.24□□□□□ -1.89
YDL228CYDL228C YPL199CQ08954 240 aa3.24□□□□□ -1.89
YDL228CYDL228C YBR255C-AQ3E776 120 aa3.24□□□□□ -1.89
YDL228CYDL228C RPL9AP05738 191 aaKnown RBP3.23□□□□□ -1.89
YDL228CYDL228C HYM1P32464 399 aa3.23□□□□□ -1.89
YDL228CYDL228C GPP2P40106 250 aaKnown RBP3.23□□□□□ -1.89
YDL228CYDL228C VPS55P47111 140 aa3.23□□□□□ -1.89
YDL228CYDL228C IMD3P50095 523 aaKnown RBP3.23□□□□□ -1.89
YDL228CYDL228C YIP1P53039 248 aa3.23□□□□□ -1.89
YDL228CYDL228C RTT103Q05543 409 aa3.23□□□□□ -1.89
YDL228CYDL228C YFH1Q07540 174 aa3.23□□□□□ -1.89
YDL228CYDL228C FEX2Q08991 375 aa3.23□□□□□ -1.89
YDL228CYDL228C MRPL23Q12487 163 aaPredicted RBP3.23□□□□□ -1.89
YDL228CYDL228C ILV5P06168 395 aaKnown RBP3.22□□□□□ -1.89
YDL228CYDL228C STF2P16965 84 aa3.22□□□□□ -1.89
YDL228CYDL228C SEC66P33754 206 aa3.22□□□□□ -1.89
YDL228CYDL228C COS8P38723 381 aa3.22□□□□□ -1.89
YDL228CYDL228C NOP16P40007 231 aaKnown RBP3.22□□□□□ -1.89
YDL228CYDL228C YKE4P40544 346 aa3.22□□□□□ -1.89
YDL228CYDL228C RPA43P46669 326 aa3.22□□□□□ -1.89
YDL228CYDL228C ARP3P47117 449 aaKnown RBP3.22□□□□□ -1.89
YDL228CYDL228C CAB5Q03941 241 aa3.22□□□□□ -1.89
YDL228CYDL228C FEX1Q08913 375 aa3.22□□□□□ -1.89
YDL228CYDL228C ATG5Q12380 294 aa3.22□□□□□ -1.89
YDL228CYDL228C VPS63O13549 108 aa3.21□□□□□ -1.9
YDL228CYDL228C SOD1P00445 154 aaKnown RBP3.21□□□□□ -1.9
YDL228CYDL228C HTB1P02293 131 aaKnown RBP3.21□□□□□ -1.9
YDL228CYDL228C NHP6BP11633 99 aaKnown RBP3.21□□□□□ -1.9
YDL228CYDL228C CAP2P13517 287 aa3.21□□□□□ -1.9
YDL228CYDL228C NOP1P15646 327 aaKnown RBP3.21□□□□□ -1.9
YDL228CYDL228C RNA14P25298 677 aaKnown RBP3.21□□□□□ -1.9
YDL228CYDL228C YCR016WP25617 290 aaKnown RBP3.21□□□□□ -1.9
YDL228CYDL228C YPS1P32329 569 aa3.21□□□□□ -1.9
YDL228CYDL228C VMA8P32610 256 aaKnown RBP3.21□□□□□ -1.9
YDL228CYDL228C RAD23P32628 398 aaKnown RBP3.21□□□□□ -1.9
YDL228CYDL228C PRS4P38063 326 aaPredicted RBP3.21□□□□□ -1.9
YDL228CYDL228C PHM8P40025 321 aa3.21□□□□□ -1.9
YDL228CYDL228C DFG10P40526 253 aa3.21□□□□□ -1.9
YDL228CYDL228C SYG1P40528 902 aa3.21□□□□□ -1.9
YDL228CYDL228C LSM1P47017 172 aaKnown RBP3.21□□□□□ -1.9
YDL228CYDL228C PUS4P48567 403 aaKnown RBP3.21□□□□□ -1.9
YDL228CYDL228C NIF3P53081 288 aa3.21□□□□□ -1.9
YDL228CYDL228C MEH1Q02205 184 aa3.21□□□□□ -1.9
YDL228CYDL228C PBP4Q07362 185 aaKnown RBP3.21□□□□□ -1.9
YDL228CYDL228C NDE2Q07500 545 aa3.21□□□□□ -1.9
YDL228CYDL228C HRD1Q08109 551 aa3.21□□□□□ -1.9
YDL228CYDL228C IRC23Q08416 157 aa3.21□□□□□ -1.9
YDL228CYDL228C RDI1Q12434 202 aa3.21□□□□□ -1.9
YDL228CYDL228C POM34Q12445 299 aa3.21□□□□□ -1.9
YDL228CYDL228C YJR112W-AQ3E743 109 aa3.21□□□□□ -1.9
YDL228CYDL228C TPI1P00942 248 aaKnown RBP3.2□□□□□ -1.9
YDL228CYDL228C QCR2P07257 368 aa3.2□□□□□ -1.9
YDL228CYDL228C SPS2P08459 502 aa3.2□□□□□ -1.9
YDL228CYDL228C YHR212W-AP0CX91 67 aa3.2□□□□□ -1.9
YDL228CYDL228C OLE1P21147 510 aaKnown RBP3.2□□□□□ -1.9
YDL228CYDL228C MIG1P27705 504 aa3.2□□□□□ -1.9
YDL228CYDL228C ATP3P38077 311 aaKnown RBP3.2□□□□□ -1.9
YDL228CYDL228C CDS1P38221 457 aa3.2□□□□□ -1.9
YDL228CYDL228C YHR138CP38841 114 aaPredicted RBP3.2□□□□□ -1.9
YDL228CYDL228C HOR7Q05827 59 aa3.2□□□□□ -1.9
YDL228CYDL228C TMA17Q12513 150 aa3.2□□□□□ -1.9
YDL228CYDL228C MRPL38P35996 138 aaPredicted RBP3.19□□□□□ -1.9
YDL228CYDL228C SRY1P36007 326 aa3.19□□□□□ -1.9
YDL228CYDL228C ELF1P36053 145 aa3.19□□□□□ -1.9
YDL228CYDL228C AIM20P40451 204 aa3.19□□□□□ -1.9
YDL228CYDL228C LST8P41318 303 aa3.19□□□□□ -1.9
YDL228CYDL228C YJR012CP47087 207 aa3.19□□□□□ -1.9
YDL228CYDL228C GIM3P53900 129 aa3.19□□□□□ -1.9
YDL228CYDL228C VPS28Q02767 242 aa3.19□□□□□ -1.9
YDL228CYDL228C EST3Q03096 181 aa3.19□□□□□ -1.9
YDL228CYDL228C YMR181CQ03231 154 aa3.19□□□□□ -1.9
YDL228CYDL228C FSH2Q05015 223 aa3.19□□□□□ -1.9
YDL228CYDL228C PEX10Q05568 337 aa3.19□□□□□ -1.9
YDL228CYDL228C PRM4Q12498 284 aa3.19□□□□□ -1.9
YDL228CYDL228C PUT1P09368 476 aa3.18□□□□□ -1.9
YDL228CYDL228C MRP17P28778 131 aa3.18□□□□□ -1.9
YDL228CYDL228C MRPL3P36516 390 aa3.18□□□□□ -1.9
YDL228CYDL228C YBR242WP38331 238 aa3.18□□□□□ -1.9
YDL228CYDL228C YPT31P38555 223 aaKnown RBP3.18□□□□□ -1.9
YDL228CYDL228C LAG1P38703 411 aa3.18□□□□□ -1.9
YDL228CYDL228C GEP4P38812 185 aa3.18□□□□□ -1.9
YDL228CYDL228C BFR1P38934 470 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
YDL228CYDL228C COX15P40086 486 aa3.18□□□□□ -1.9
YDL228CYDL228C ARO8P53090 500 aaKnown RBP3.18□□□□□ -1.9
YDL228CYDL228C TOS8P53147 276 aa3.18□□□□□ -1.9
YDL228CYDL228C YGR219WP53307 113 aa3.18□□□□□ -1.9
YDL228CYDL228C TIM44Q01852 431 aa3.18□□□□□ -1.9
YDL228CYDL228C MRPL13Q02204 264 aa3.18□□□□□ -1.9
YDL228CYDL228C YHP1Q04116 353 aa3.18□□□□□ -1.9
YDL228CYDL228C YOL029CQ08187 201 aa3.18□□□□□ -1.9
YDL228CYDL228C YCT1Q12235 531 aa3.18□□□□□ -1.9
YDL228CYDL228C ARG80P07249 177 aa3.17□□□□□ -1.9
YDL228CYDL228C URA5P13298 226 aaKnown RBP3.17□□□□□ -1.9
YDL228CYDL228C MDM10P18409 493 aa3.17□□□□□ -1.9
YDL228CYDL228C PDC2P32896 925 aa3.17□□□□□ -1.9
YDL228CYDL228C ERV15P38312 142 aa3.17□□□□□ -1.9
YDL228CYDL228C YAR068WP39564 161 aa3.17□□□□□ -1.9
YDL228CYDL228C RFC2P40348 353 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms