RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W TY2B-BQ12491 1770 aa1.13□□□□□ -2.23
CDC36YDL165W TY2B-OR2Q12501 1770 aa1.13□□□□□ -2.23
CDC36YDL165W TY1B-DR3Q99231 1755 aa1.13□□□□□ -2.23
CDC36YDL165W GCN2P15442 1659 aa1.13□□□□□ -2.23
CDC36YDL165W KOG1P38873 1557 aa1.13□□□□□ -2.23
CDC36YDL165W TY3B-IQ7LHG5 1498 aaKnown RBP1.13□□□□□ -2.23
CDC36YDL165W COX3P00420 269 aa1.13□□□□□ -2.23
CDC36YDL165W HIS1P00498 297 aaKnown RBP1.13□□□□□ -2.23
CDC36YDL165W RAS2P01120 322 aaKnown RBP1.13□□□□□ -2.23
CDC36YDL165W SIR2P06700 562 aa1.13□□□□□ -2.23
CDC36YDL165W ADK1P07170 222 aaKnown RBP1.13□□□□□ -2.23
CDC36YDL165W RPS25BP0C0T4 108 aaKnown RBP1.13□□□□□ -2.23
CDC36YDL165W YKR104WP0CE69 306 aa1.13□□□□□ -2.23
CDC36YDL165W YOL163WP0CF20 169 aa1.13□□□□□ -2.23
CDC36YDL165W UBI4P0CG63 381 aaKnown RBP1.13□□□□□ -2.23
CDC36YDL165W RPL18AP0CX49 186 aaKnown RBP1.13□□□□□ -2.23
CDC36YDL165W RPL18BP0CX50 186 aaKnown RBP1.13□□□□□ -2.23
CDC36YDL165W RPL12AP0CX53 165 aaKnown RBP1.13□□□□□ -2.23
CDC36YDL165W RPL12BP0CX54 165 aa1.13□□□□□ -2.23
CDC36YDL165W CKS1P20486 150 aaKnown RBP1.13□□□□□ -2.23
CDC36YDL165W PPH21P23594 369 aa1.13□□□□□ -2.23
CDC36YDL165W GPI12P23797 304 aa1.13□□□□□ -2.23
CDC36YDL165W YCR102CP25608 368 aa1.13□□□□□ -2.23
CDC36YDL165W TAH1P25638 111 aaPredicted RBP1.13□□□□□ -2.23
CDC36YDL165W TIP1P27654 210 aaPredicted RBP1.13□□□□□ -2.23
CDC36YDL165W YPS1P32329 569 aa1.13□□□□□ -2.23
CDC36YDL165W YSC83P32792 385 aa1.13□□□□□ -2.23
CDC36YDL165W EMP24P32803 203 aaKnown RBP1.13□□□□□ -2.23
CDC36YDL165W REC114P32841 428 aa1.13□□□□□ -2.23
CDC36YDL165W TKL2P33315 681 aa1.13□□□□□ -2.23
CDC36YDL165W YKL187CP34231 750 aa1.13□□□□□ -2.23
CDC36YDL165W SDH4P37298 181 aa1.13□□□□□ -2.23
CDC36YDL165W YBR096WP38256 230 aa1.13□□□□□ -2.23
CDC36YDL165W IML3P38265 245 aa1.13□□□□□ -2.23
CDC36YDL165W RTC2P38279 296 aa1.13□□□□□ -2.23
CDC36YDL165W YHL026CP38740 315 aa1.13□□□□□ -2.23
CDC36YDL165W TRR2P38816 342 aa1.13□□□□□ -2.23
CDC36YDL165W RPB11P38902 120 aa1.13□□□□□ -2.23
CDC36YDL165W ASP1P38986 381 aaPredicted RBP1.13□□□□□ -2.23
CDC36YDL165W GAA1P39012 614 aa1.13□□□□□ -2.23
CDC36YDL165W GCV3P39726 170 aaPredicted RBP1.13□□□□□ -2.23
CDC36YDL165W YAL037WP39728 267 aa1.13□□□□□ -2.23
CDC36YDL165W AVT2P39981 480 aa1.13□□□□□ -2.23
CDC36YDL165W YER076CP40049 302 aa1.13□□□□□ -2.23
CDC36YDL165W YER188WP40103 239 aa1.13□□□□□ -2.23
CDC36YDL165W YIL059CP40520 121 aa1.13□□□□□ -2.23
CDC36YDL165W EMC5P40540 141 aa1.13□□□□□ -2.23
CDC36YDL165W PAU15P40585 124 aa1.13□□□□□ -2.23
CDC36YDL165W OST1P41543 476 aaKnown RBP1.13□□□□□ -2.23
CDC36YDL165W CAT5P41735 233 aa1.13□□□□□ -2.23
CDC36YDL165W SMD3P43321 101 aaKnown RBP1.13□□□□□ -2.23
CDC36YDL165W YFR045WP43617 309 aa1.13□□□□□ -2.23
CDC36YDL165W YJR085CP47131 105 aaKnown RBP1.13□□□□□ -2.23
CDC36YDL165W YGR149WP48236 432 aa1.13□□□□□ -2.23
CDC36YDL165W OST3P48439 350 aa1.13□□□□□ -2.23
CDC36YDL165W SBH1P52870 82 aa1.13□□□□□ -2.23
CDC36YDL165W YIP1P53039 248 aa1.13□□□□□ -2.23
CDC36YDL165W MMS2P53152 137 aa1.13□□□□□ -2.23
CDC36YDL165W SAY1P53324 424 aa1.13□□□□□ -2.23
CDC36YDL165W PDR17P53844 350 aa1.13□□□□□ -2.23
CDC36YDL165W YIF1P53845 314 aaKnown RBP1.13□□□□□ -2.23
CDC36YDL165W PGA1P53896 198 aa1.13□□□□□ -2.23
CDC36YDL165W AAH1P53909 347 aa1.13□□□□□ -2.23
CDC36YDL165W GPI15P53961 229 aa1.13□□□□□ -2.23
CDC36YDL165W CDC14Q00684 551 aa1.13□□□□□ -2.23
CDC36YDL165W MRX11Q03079 207 aa1.13□□□□□ -2.23
CDC36YDL165W YMR166CQ03829 368 aa1.13□□□□□ -2.23
CDC36YDL165W TVP15Q03860 143 aa1.13□□□□□ -2.23
CDC36YDL165W YMR130WQ04223 302 aa1.13□□□□□ -2.23
CDC36YDL165W UTP15Q04305 513 aaKnown RBP1.13□□□□□ -2.23
CDC36YDL165W HNT1Q04344 158 aaKnown RBP1.13□□□□□ -2.23
CDC36YDL165W FIT1Q04433 528 aa1.13□□□□□ -2.23
CDC36YDL165W AVO2Q04749 426 aa1.13□□□□□ -2.23
CDC36YDL165W YMR310CQ04867 317 aaPredicted RBP1.13□□□□□ -2.23
CDC36YDL165W ANT1Q06497 328 aa1.13□□□□□ -2.23
CDC36YDL165W NAT3Q06504 195 aa1.13□□□□□ -2.23
CDC36YDL165W GPI11Q06636 219 aa1.13□□□□□ -2.23
CDC36YDL165W HEM25Q07534 307 aa1.13□□□□□ -2.23
CDC36YDL165W LDS2Q08218 356 aa1.13□□□□□ -2.23
CDC36YDL165W YPL264CQ08980 353 aa1.13□□□□□ -2.23
CDC36YDL165W SIA1Q12212 622 aa1.13□□□□□ -2.23
CDC36YDL165W YLR118CQ12354 227 aa1.13□□□□□ -2.23
CDC36YDL165W YPR145C-AQ2V2P0 78 aa1.13□□□□□ -2.23
CDC36YDL165W RPS25AQ3E792 108 aaPredicted RBP1.13□□□□□ -2.23
CDC36YDL165W ESP1Q03018 1630 aa1.13□□□□□ -2.23
CDC36YDL165W GDB1Q06625 1536 aa1.13□□□□□ -2.23
CDC36YDL165W SEC7P11075 2009 aaKnown RBP1.13□□□□□ -2.23
CDC36YDL165W POL1P13382 1468 aa1.12□□□□□ -2.23
CDC36YDL165W YOR1P53049 1477 aa1.12□□□□□ -2.23
CDC36YDL165W YEL009C-AA0A023PZF2 135 aa1.12□□□□□ -2.23
CDC36YDL165W MBF1O14467 151 aaKnown RBP1.12□□□□□ -2.23
CDC36YDL165W RPL28P02406 149 aaKnown RBP1.12□□□□□ -2.23
CDC36YDL165W YER039C-AP0CD97 72 aa1.12□□□□□ -2.23
CDC36YDL165W PAU19P0CE85 124 aa1.12□□□□□ -2.23
CDC36YDL165W PAU21P0CE86 164 aa1.12□□□□□ -2.23
CDC36YDL165W PAU22P0CE87 164 aa1.12□□□□□ -2.23
CDC36YDL165W RPS8AP0CX39 200 aaKnown RBP1.12□□□□□ -2.23
CDC36YDL165W RPS8BP0CX40 200 aaKnown RBP1.12□□□□□ -2.23
CDC36YDL165W UBC5P15732 148 aa1.12□□□□□ -2.23
CDC36YDL165W COX10P21592 462 aa1.12□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 53.4 ms