RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeast

Gene CDC28, Length 897 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC28	YBR160W	YPL264C	Q08980	353 aa		4.21	□□□□□ -1.74
CDC28	YBR160W	POM33	Q12164	279 aa		4.21	□□□□□ -1.74
CDC28	YBR160W	ISA2	Q12425	185 aa		4.21	□□□□□ -1.74
CDC28	YBR160W	YBR126W-A	Q8TGU7	68 aa		4.21	□□□□□ -1.74
CDC28	YBR160W	RPL9A	P05738	191 aa	Known RBP	4.2	□□□□□ -1.74
CDC28	YBR160W	RPS25B	P0C0T4	108 aa	Known RBP	4.2	□□□□□ -1.74
CDC28	YBR160W	STE4	P18851	423 aa		4.2	□□□□□ -1.74
CDC28	YBR160W	QCR9	P22289	66 aa		4.2	□□□□□ -1.74
CDC28	YBR160W	DEG1	P31115	442 aa	Known RBP	4.2	□□□□□ -1.74
CDC28	YBR160W	REC114	P32841	428 aa		4.2	□□□□□ -1.74
CDC28	YBR160W	MNS1	P32906	549 aa		4.2	□□□□□ -1.74
CDC28	YBR160W	YNL208W	P40159	199 aa	Known RBP	4.2	□□□□□ -1.74
CDC28	YBR160W	PRM5	P40476	318 aa		4.2	□□□□□ -1.74
CDC28	YBR160W	RPL9B	P51401	191 aa	Known RBP	4.2	□□□□□ -1.74
CDC28	YBR160W	LST7	P53237	242 aa		4.2	□□□□□ -1.74
CDC28	YBR160W	MRP51	Q02950	344 aa		4.2	□□□□□ -1.74
CDC28	YBR160W	FRQ1	Q06389	190 aa		4.2	□□□□□ -1.74
CDC28	YBR160W	REX3	Q12090	404 aa		4.2	□□□□□ -1.74
CDC28	YBR160W	RPS25A	Q3E792	108 aa	Predicted RBP	4.2	□□□□□ -1.74
CDC28	YBR160W	YPR108W-A	Q3E7B3	70 aa		4.2	□□□□□ -1.74
CDC28	YBR160W	MES1	P00958	751 aa	Known RBP	4.19	□□□□□ -1.74
CDC28	YBR160W	CDC36	P06100	191 aa	Predicted RBP	4.19	□□□□□ -1.74
CDC28	YBR160W	YSF3	P0C074	85 aa	Predicted RBP	4.19	□□□□□ -1.74
CDC28	YBR160W	PDX1	P16451	410 aa		4.19	□□□□□ -1.74
CDC28	YBR160W	SPO13	P23624	291 aa		4.19	□□□□□ -1.74
CDC28	YBR160W	ERG8	P24521	451 aa		4.19	□□□□□ -1.74
CDC28	YBR160W	TCA17	P32613	152 aa		4.19	□□□□□ -1.74
CDC28	YBR160W	CUE1	P38428	203 aa		4.19	□□□□□ -1.74
CDC28	YBR160W	COX15	P40086	486 aa		4.19	□□□□□ -1.74
CDC28	YBR160W	CTK2	P46962	323 aa		4.19	□□□□□ -1.74
CDC28	YBR160W	TTI2	P47168	421 aa		4.19	□□□□□ -1.74
CDC28	YBR160W	PDR17	P53844	350 aa		4.19	□□□□□ -1.74
CDC28	YBR160W	STD1	Q02794	444 aa		4.19	□□□□□ -1.74
CDC28	YBR160W	RCE1	Q03530	315 aa		4.19	□□□□□ -1.74
CDC28	YBR160W	HRI1	Q05905	244 aa	Known RBP	4.19	□□□□□ -1.74
CDC28	YBR160W	AKR2	Q12013	749 aa		4.19	□□□□□ -1.74
CDC28	YBR160W	YBR255C-A	Q3E776	120 aa		4.19	□□□□□ -1.74
CDC28	YBR160W	FMP49	A0A023PZB3	126 aa		4.18	□□□□□ -1.74
CDC28	YBR160W	RPS22A	P0C0W1	130 aa	Known RBP	4.18	□□□□□ -1.74
CDC28	YBR160W	URA5	P13298	226 aa	Known RBP	4.18	□□□□□ -1.74
CDC28	YBR160W	HAP3	P13434	144 aa		4.18	□□□□□ -1.74
CDC28	YBR160W	ELO2	P25358	347 aa		4.18	□□□□□ -1.74
CDC28	YBR160W	ATG15	P25641	520 aa		4.18	□□□□□ -1.74
CDC28	YBR160W	RPB7	P34087	171 aa		4.18	□□□□□ -1.74
CDC28	YBR160W	RPS27A	P35997	82 aa	Known RBP	4.18	□□□□□ -1.74
CDC28	YBR160W	FIG1	P38224	298 aa		4.18	□□□□□ -1.74
CDC28	YBR160W	RPS27B	P38711	82 aa		4.18	□□□□□ -1.74
CDC28	YBR160W	WSC4	P38739	605 aa		4.18	□□□□□ -1.74
CDC28	YBR160W	PSD1	P39006	500 aa		4.18	□□□□□ -1.74
CDC28	YBR160W	YEL057C	P39983	233 aa		4.18	□□□□□ -1.74
CDC28	YBR160W	YIL152W	P40455	235 aa		4.18	□□□□□ -1.74
CDC28	YBR160W	CDC40	P40968	455 aa	Predicted RBP	4.18	□□□□□ -1.74
CDC28	YBR160W	LOC1	P43586	204 aa	Predicted RBP	4.18	□□□□□ -1.74
CDC28	YBR160W	GPI2	P46961	280 aa		4.18	□□□□□ -1.74
CDC28	YBR160W	LCL3	P53153	274 aa		4.18	□□□□□ -1.74
CDC28	YBR160W	DUO1	P53168	247 aa	Known RBP	4.18	□□□□□ -1.74
CDC28	YBR160W	PAM18	Q07914	168 aa		4.18	□□□□□ -1.74
CDC28	YBR160W	PAU23	Q07987	124 aa		4.18	□□□□□ -1.74
CDC28	YBR160W	NIP7	Q08962	181 aa	Known RBP	4.18	□□□□□ -1.74
CDC28	YBR160W	YRA1	Q12159	226 aa	Known RBP	4.18	□□□□□ -1.74
CDC28	YBR160W	PAU17	Q12370	124 aa		4.18	□□□□□ -1.74
CDC28	YBR160W	HUT1	Q12520	339 aa		4.18	□□□□□ -1.74
CDC28	YBR160W	ATG40	Q99325	256 aa		4.18	□□□□□ -1.74
CDC28	YBR160W	POR1	P04840	283 aa	Known RBP	4.17	□□□□□ -1.74
CDC28	YBR160W	YLL053C	P0CD98	152 aa		4.17	□□□□□ -1.74
CDC28	YBR160W	RPL30	P14120	105 aa	Known RBP	4.17	□□□□□ -1.74
CDC28	YBR160W	SPO7	P18410	259 aa		4.17	□□□□□ -1.74
CDC28	YBR160W	MXR2	P25566	168 aa		4.17	□□□□□ -1.74
CDC28	YBR160W	SPS18	P32572	300 aa		4.17	□□□□□ -1.74
CDC28	YBR160W	YKL187C	P34231	750 aa		4.17	□□□□□ -1.74
CDC28	YBR160W	YUH1	P35127	236 aa		4.17	□□□□□ -1.74
CDC28	YBR160W	RPB11	P38902	120 aa		4.17	□□□□□ -1.74
CDC28	YBR160W	ELO1	P39540	310 aa		4.17	□□□□□ -1.74
CDC28	YBR160W	YND1	P40009	630 aa		4.17	□□□□□ -1.74
CDC28	YBR160W	CCS1	P40202	249 aa	Known RBP	4.17	□□□□□ -1.74
CDC28	YBR160W	YGR126W	P53274	230 aa		4.17	□□□□□ -1.74
CDC28	YBR160W	YNR048W	P53740	393 aa		4.17	□□□□□ -1.74
CDC28	YBR160W	DAD3	P69850	94 aa		4.17	□□□□□ -1.74
CDC28	YBR160W	TIM10	P87108	93 aa		4.17	□□□□□ -1.74
CDC28	YBR160W	CWC27	Q02770	301 aa		4.17	□□□□□ -1.74
CDC28	YBR160W	DIG2	Q03373	323 aa	Known RBP	4.17	□□□□□ -1.74
CDC28	YBR160W	DPB4	Q04603	196 aa	Known RBP	4.17	□□□□□ -1.74
CDC28	YBR160W	DIC1	Q06143	298 aa		4.17	□□□□□ -1.74
CDC28	YBR160W	NDE2	Q07500	545 aa		4.17	□□□□□ -1.74
CDC28	YBR160W	GRE1	Q08969	168 aa		4.17	□□□□□ -1.74
CDC28	YBR160W	PAR32	Q12515	295 aa	Known RBP	4.17	□□□□□ -1.74
CDC28	YBR160W	HUG1	Q6Q5K6	68 aa		4.17	□□□□□ -1.74
CDC28	YBR160W	ARF1	P11076	181 aa	Known RBP	4.16	□□□□□ -1.74
CDC28	YBR160W	SRP21	P32342	167 aa		4.16	□□□□□ -1.74
CDC28	YBR160W	HSP150	P32478	413 aa		4.16	□□□□□ -1.74
CDC28	YBR160W	RML2	P32611	393 aa		4.16	□□□□□ -1.74
CDC28	YBR160W	PAU16	P35994	123 aa		4.16	□□□□□ -1.74
CDC28	YBR160W	MIX23	P38162	196 aa		4.16	□□□□□ -1.74
CDC28	YBR160W	YGR269W	P40326	108 aa		4.16	□□□□□ -1.74
CDC28	YBR160W	AGE2	P40529	298 aa		4.16	□□□□□ -1.74
CDC28	YBR160W	CUP9	P41817	306 aa		4.16	□□□□□ -1.74
CDC28	YBR160W	SPG5	P42933	373 aa		4.16	□□□□□ -1.74
CDC28	YBR160W	RPN14	P53196	417 aa		4.16	□□□□□ -1.74
CDC28	YBR160W	SEI1	Q06058	285 aa		4.16	□□□□□ -1.74
CDC28	YBR160W	YOR186W	Q08560	144 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms