RNA–Protein interactions for RNA: YBL039C

URA7, Transcript of Major CTP synthase isozyme (see also URA8), yeast

Gene URA7, Length 1,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URA7	YBL039C	YBR063C	P38083	404 aa		4.24	□□□□□ -1.73
URA7	YBL039C	FMP23	P38231	175 aa		4.24	□□□□□ -1.73
URA7	YBL039C	TRM7	P38238	310 aa	Known RBP	4.24	□□□□□ -1.73
URA7	YBL039C	MED6	P38782	295 aa		4.24	□□□□□ -1.73
URA7	YBL039C	RRT13	P40042	185 aa		4.24	□□□□□ -1.73
URA7	YBL039C	MNN5	P46982	586 aa		4.24	□□□□□ -1.73
URA7	YBL039C	YJR111C	P47148	283 aa	Known RBP	4.24	□□□□□ -1.73
URA7	YBL039C	RCF2	P53721	224 aa		4.24	□□□□□ -1.73
URA7	YBL039C	OSH6	Q02201	448 aa		4.24	□□□□□ -1.73
URA7	YBL039C	YDL211C	Q12121	372 aa		4.24	□□□□□ -1.73
URA7	YBL039C	YPL247C	Q12523	523 aa		4.24	□□□□□ -1.73
URA7	YBL039C	YAL067W-A	Q8TGK6	75 aa		4.24	□□□□□ -1.73
URA7	YBL039C	MRPS28	P21771	286 aa		4.23	□□□□□ -1.73
URA7	YBL039C	SPO13	P23624	291 aa		4.23	□□□□□ -1.73
URA7	YBL039C	YGP1	P38616	354 aa	Known RBP	4.23	□□□□□ -1.73
URA7	YBL039C	ISD11	Q6Q560	94 aa		4.23	□□□□□ -1.73
URA7	YBL039C	YFR032C-B	Q8TGU2	87 aa		4.23	□□□□□ -1.73
URA7	YBL039C	YPR170W-B	P0C5R9	85 aa		4.22	□□□□□ -1.73
URA7	YBL039C	RPB9	P27999	122 aa		4.22	□□□□□ -1.73
URA7	YBL039C	POP4	P38336	279 aa		4.22	□□□□□ -1.73
URA7	YBL039C	CAX4	P53223	239 aa		4.22	□□□□□ -1.73
URA7	YBL039C	TSC3	Q3E790	80 aa		4.22	□□□□□ -1.73
URA7	YBL039C	RAD50	P12753	1312 aa		4.22	□□□□□ -1.73
URA7	YBL039C	PDR18	P53756	1333 aa		4.22	□□□□□ -1.73
URA7	YBL039C	CKS1	P20486	150 aa	Known RBP	4.21	□□□□□ -1.73
URA7	YBL039C	RNP1	P32385	249 aa		4.21	□□□□□ -1.73
URA7	YBL039C	UTP30	P36144	274 aa	Known RBP	4.21	□□□□□ -1.73
URA7	YBL039C	SKG1	P36169	355 aa		4.21	□□□□□ -1.73
URA7	YBL039C	YEA4	P40004	342 aa		4.21	□□□□□ -1.73
URA7	YBL039C	APQ12	P40532	138 aa		4.21	□□□□□ -1.73
URA7	YBL039C	PHB1	P40961	287 aa		4.21	□□□□□ -1.73
URA7	YBL039C	SKI6	P46948	246 aa	Predicted RBP	4.21	□□□□□ -1.73
URA7	YBL039C	YDR249C	Q03787	373 aa		4.21	□□□□□ -1.73
URA7	YBL039C	PRR2	Q12310	699 aa		4.21	□□□□□ -1.73
URA7	YBL039C	RRP5	Q05022	1729 aa	Known RBP	4.21	□□□□□ -1.74
URA7	YBL039C	CDC8	P00572	216 aa		4.21	□□□□□ -1.74
URA7	YBL039C	RPL2A	P0CX45	254 aa	Known RBP	4.21	□□□□□ -1.74
URA7	YBL039C	RPL2B	P0CX46	254 aa	Known RBP	4.21	□□□□□ -1.74
URA7	YBL039C	LDB16	P25587	256 aa		4.21	□□□□□ -1.74
URA7	YBL039C	SUA7	P29055	345 aa	Predicted RBP	4.21	□□□□□ -1.74
URA7	YBL039C	SEC17	P32602	292 aa		4.21	□□□□□ -1.74
URA7	YBL039C	ECM34	P38728	170 aa		4.21	□□□□□ -1.74
URA7	YBL039C	YGL088W	P53151	121 aa		4.21	□□□□□ -1.74
URA7	YBL039C	RSM27	P53305	110 aa		4.21	□□□□□ -1.74
URA7	YBL039C	LSM3	P57743	89 aa	Known RBP	4.21	□□□□□ -1.74
URA7	YBL039C	MRX8	Q05473	314 aa		4.21	□□□□□ -1.74
URA7	YBL039C	IES4	Q08561	116 aa		4.21	□□□□□ -1.74
URA7	YBL039C	PST2	Q12335	198 aa	Known RBP	4.21	□□□□□ -1.74
URA7	YBL039C	COX4	P04037	155 aa		4.2	□□□□□ -1.74
URA7	YBL039C	ADH3	P07246	375 aa	Known RBP	4.2	□□□□□ -1.74
URA7	YBL039C	YAR068W	P39564	161 aa		4.2	□□□□□ -1.74
URA7	YBL039C	RFC2	P40348	353 aa		4.2	□□□□□ -1.74
URA7	YBL039C	FIS1	P40515	155 aa		4.2	□□□□□ -1.74
URA7	YBL039C	YJR015W	P47090	510 aa		4.2	□□□□□ -1.74
URA7	YBL039C	SDT1	P53078	280 aa		4.2	□□□□□ -1.74
URA7	YBL039C	HHT1	P61830	136 aa		4.2	□□□□□ -1.74
URA7	YBL039C	SNF2	P22082	1703 aa		4.2	□□□□□ -1.74
URA7	YBL039C	RPB3	P16370	318 aa	Known RBP	4.19	□□□□□ -1.74
URA7	YBL039C	SFK1	P35735	353 aa		4.19	□□□□□ -1.74
URA7	YBL039C	PRS3	P38689	320 aa	Known RBP	4.19	□□□□□ -1.74
URA7	YBL039C	COS8	P38723	381 aa		4.19	□□□□□ -1.74
URA7	YBL039C	KRE9	P39005	276 aa		4.19	□□□□□ -1.74
URA7	YBL039C	TIF34	P40217	347 aa	Known RBP	4.19	□□□□□ -1.74
URA7	YBL039C	PFS2	P42841	465 aa	Known RBP	4.19	□□□□□ -1.74
URA7	YBL039C	UBC7	Q02159	165 aa		4.19	□□□□□ -1.74
URA7	YBL039C	YPD1	Q07688	167 aa		4.19	□□□□□ -1.74
URA7	YBL039C	YDL180W	Q12301	547 aa		4.19	□□□□□ -1.74
URA7	YBL039C	RIB3	Q99258	208 aa		4.19	□□□□□ -1.74
URA7	YBL039C	BET1	P22804	142 aa		4.18	□□□□□ -1.74
URA7	YBL039C	RCN1	P36054	211 aa		4.18	□□□□□ -1.74
URA7	YBL039C	MRPL27	P36526	146 aa	Predicted RBP	4.18	□□□□□ -1.74
URA7	YBL039C	XPT1	P47165	209 aa		4.18	□□□□□ -1.74
URA7	YBL039C	PGU1	P47180	361 aa		4.18	□□□□□ -1.74
URA7	YBL039C	CBP6	P07253	162 aa	Predicted RBP	4.18	□□□□□ -1.74
URA7	YBL039C	PRE7	P23724	241 aa	Known RBP	4.18	□□□□□ -1.74
URA7	YBL039C	AIM2	P39721	246 aa		4.18	□□□□□ -1.74
URA7	YBL039C	BUD13	P46947	266 aa	Predicted RBP	4.18	□□□□□ -1.74
URA7	YBL039C	TDA4	P47153	279 aa		4.18	□□□□□ -1.74
URA7	YBL039C	THI74	Q04083	370 aa		4.18	□□□□□ -1.74
URA7	YBL039C	WIP1	Q2V2P8	89 aa		4.18	□□□□□ -1.74
URA7	YBL039C	YOL085C	Q99345	113 aa		4.18	□□□□□ -1.74
URA7	YBL039C	NUP192	P47054	1683 aa		4.17	□□□□□ -1.74
URA7	YBL039C	YLR156W	P0CE96	114 aa		4.17	□□□□□ -1.74
URA7	YBL039C	YLR159W	P0CE97	114 aa		4.17	□□□□□ -1.74
URA7	YBL039C	YLR161W	P0CE98	114 aa		4.17	□□□□□ -1.74
URA7	YBL039C	URA5	P13298	226 aa	Known RBP	4.17	□□□□□ -1.74
URA7	YBL039C	COX10	P21592	462 aa		4.17	□□□□□ -1.74
URA7	YBL039C	YBR285W	P38354	144 aa		4.17	□□□□□ -1.74
URA7	YBL039C	GPI14	P47088	403 aa	Known RBP	4.17	□□□□□ -1.74
URA7	YBL039C	SOL1	P50278	321 aa		4.17	□□□□□ -1.74
URA7	YBL039C	YMR320W	Q04897	101 aa		4.17	□□□□□ -1.74
URA7	YBL039C	YOR342C	Q12182	319 aa		4.17	□□□□□ -1.74
URA7	YBL039C	GEP5	Q12393	293 aa		4.17	□□□□□ -1.74
URA7	YBL039C	Q0255	P03881	472 aa		4.16	□□□□□ -1.74
URA7	YBL039C	STP22	P25604	385 aa		4.16	□□□□□ -1.74
URA7	YBL039C	SWD3	P38123	315 aa		4.16	□□□□□ -1.74
URA7	YBL039C	DLS1	P40366	167 aa		4.16	□□□□□ -1.74
URA7	YBL039C	ATG39	Q06159	398 aa		4.16	□□□□□ -1.74
URA7	YBL039C	HRD1	Q08109	551 aa		4.16	□□□□□ -1.74
URA7	YBL039C	MCP1	Q12106	302 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms