RNA–Protein interactions for RNA: YOR066W

MSA1, Transcript of Activator of G1-specific transcription factors MBF and SBF, yeast

Gene MSA1, Length 1,890 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSA1	YOR066W	YMR279C	Q03263	540 aa		2.79	□□□□□ -1.96
MSA1	YOR066W	CCA1	P21269	546 aa		2.78	□□□□□ -1.96
MSA1	YOR066W	ECM33	P38248	429 aa	Known RBP	2.78	□□□□□ -1.96
MSA1	YOR066W	LPP1	Q04396	274 aa		2.78	□□□□□ -1.96
MSA1	YOR066W	TY4B-H	P0C2J7	1802 aa		2.78	□□□□□ -1.96
MSA1	YOR066W	TY4B-J	P47024	1803 aa		2.78	□□□□□ -1.96
MSA1	YOR066W	FAB1	P34756	2278 aa		2.78	□□□□□ -1.96
MSA1	YOR066W	YPR096C	O13587	100 aa		2.77	□□□□□ -1.97
MSA1	YOR066W	MRPL28	P36527	147 aa		2.77	□□□□□ -1.97
MSA1	YOR066W	SDH4	P37298	181 aa		2.77	□□□□□ -1.97
MSA1	YOR066W	CDD1	Q06549	142 aa		2.77	□□□□□ -1.97
MSA1	YOR066W	FKS3	Q04952	1785 aa		2.77	□□□□□ -1.97
MSA1	YOR066W	SEC4	P07560	215 aa	Known RBP	2.77	□□□□□ -1.97
MSA1	YOR066W	YHR032W-A	P0C5N6	59 aa		2.77	□□□□□ -1.97
MSA1	YOR066W	MMS2	P53152	137 aa		2.77	□□□□□ -1.97
MSA1	YOR066W	YPR170W-B	P0C5R9	85 aa		2.76	□□□□□ -1.97
MSA1	YOR066W	ATP7	P30902	174 aa		2.76	□□□□□ -1.97
MSA1	YOR066W	RSM25	P40496	264 aa		2.76	□□□□□ -1.97
MSA1	YOR066W	HOP2	P53187	214 aa		2.76	□□□□□ -1.97
MSA1	YOR066W	YGR026W	P53217	278 aa		2.76	□□□□□ -1.97
MSA1	YOR066W	PET191	Q02772	108 aa		2.76	□□□□□ -1.97
MSA1	YOR066W	SNF2	P22082	1703 aa		2.75	□□□□□ -1.97
MSA1	YOR066W	TCA17	P32613	152 aa		2.75	□□□□□ -1.97
MSA1	YOR066W	VMA11	P32842	164 aa		2.75	□□□□□ -1.97
MSA1	YOR066W	YIL001W	P40560	513 aa		2.75	□□□□□ -1.97
MSA1	YOR066W	SMD3	P43321	101 aa	Known RBP	2.75	□□□□□ -1.97
MSA1	YOR066W	GPM2	Q12008	311 aa		2.75	□□□□□ -1.97
MSA1	YOR066W	RPL9A	P05738	191 aa	Known RBP	2.75	□□□□□ -1.97
MSA1	YOR066W	RPL26A	P05743	127 aa	Known RBP	2.75	□□□□□ -1.97
MSA1	YOR066W	SCM4	P32564	187 aa		2.75	□□□□□ -1.97
MSA1	YOR066W	CTR2	P38865	189 aa		2.75	□□□□□ -1.97
MSA1	YOR066W	RPL9B	P51401	191 aa	Known RBP	2.75	□□□□□ -1.97
MSA1	YOR066W	RPL26B	P53221	127 aa	Known RBP	2.75	□□□□□ -1.97
MSA1	YOR066W	YNL010W	P53981	241 aa	Known RBP	2.75	□□□□□ -1.97
MSA1	YOR066W	CLP1	Q08685	445 aa	Predicted RBP	2.75	□□□□□ -1.97
MSA1	YOR066W	AKR2	Q12013	749 aa		2.75	□□□□□ -1.97
MSA1	YOR066W	TDA8	Q6B2U8	126 aa		2.75	□□□□□ -1.97
MSA1	YOR066W	YLR419W	Q06698	1435 aa	Known RBP	2.74	□□□□□ -1.97
MSA1	YOR066W	RMD6	P39975	231 aa		2.74	□□□□□ -1.97
MSA1	YOR066W	LSM7	P53905	115 aa	Known RBP	2.74	□□□□□ -1.97
MSA1	YOR066W	MDM32	Q12171	622 aa		2.74	□□□□□ -1.97
MSA1	YOR066W	YHR214C-E	Q8TGK0	99 aa		2.74	□□□□□ -1.97
MSA1	YOR066W	RPL25	P04456	142 aa	Known RBP	2.73	□□□□□ -1.97
MSA1	YOR066W	CDC7	P06243	507 aa		2.73	□□□□□ -1.97
MSA1	YOR066W	ATG22	P25568	528 aa		2.73	□□□□□ -1.97
MSA1	YOR066W	APC1	P53886	1748 aa		2.73	□□□□□ -1.97
MSA1	YOR066W	DIA1	P54005	336 aa		2.73	□□□□□ -1.97
MSA1	YOR066W	GAS3	Q03655	524 aa		2.73	□□□□□ -1.97
MSA1	YOR066W	RDS3	Q06835	107 aa	Predicted RBP	2.73	□□□□□ -1.97
MSA1	YOR066W	YNG1	Q08465	219 aa		2.73	□□□□□ -1.97
MSA1	YOR066W	PSF1	Q12488	208 aa		2.73	□□□□□ -1.97
MSA1	YOR066W	GRX2	P17695	143 aa	Known RBP	2.72	□□□□□ -1.97
MSA1	YOR066W	YHL026C	P38740	315 aa		2.72	□□□□□ -1.97
MSA1	YOR066W	MRPL49	P40858	161 aa	Predicted RBP	2.72	□□□□□ -1.97
MSA1	YOR066W	EAF6	P47128	113 aa		2.72	□□□□□ -1.97
MSA1	YOR066W	AIM25	P47140	327 aa		2.72	□□□□□ -1.97
MSA1	YOR066W	YJR146W	P47174	117 aa		2.72	□□□□□ -1.97
MSA1	YOR066W	YGR050C	P53231	118 aa		2.72	□□□□□ -1.97
MSA1	YOR066W	HRT1	Q08273	121 aa		2.72	□□□□□ -1.97
MSA1	YOR066W	REP2	P03872	296 aa		2.71	□□□□□ -1.98
MSA1	YOR066W	RPS24A	P0CX31	135 aa	Known RBP	2.71	□□□□□ -1.98
MSA1	YOR066W	RPS24B	P0CX32	135 aa	Known RBP	2.71	□□□□□ -1.98
MSA1	YOR066W	PTM1	P32857	523 aa		2.71	□□□□□ -1.98
MSA1	YOR066W	POP4	P38336	279 aa		2.71	□□□□□ -1.98
MSA1	YOR066W	YER034W	P40022	185 aa	Known RBP	2.71	□□□□□ -1.98
MSA1	YOR066W	SNX4	P47057	423 aa		2.71	□□□□□ -1.98
MSA1	YOR066W	DSK2	P48510	373 aa		2.71	□□□□□ -1.98
MSA1	YOR066W	APJ1	P53940	528 aa		2.71	□□□□□ -1.98
MSA1	YOR066W	SUE1	Q06524	206 aa		2.71	□□□□□ -1.98
MSA1	YOR066W	YOL160W	Q08321	113 aa		2.71	□□□□□ -1.98
MSA1	YOR066W	MRS1	P07266	363 aa		2.71	□□□□□ -1.98
MSA1	YOR066W	SEC72	P39742	193 aa	Known RBP	2.71	□□□□□ -1.98
MSA1	YOR066W	SLM2	P53955	656 aa		2.71	□□□□□ -1.98
MSA1	YOR066W	YRF1-3	P0CX14	1859 aa		2.7	□□□□□ -1.98
MSA1	YOR066W	YRF1-7	P0CX15	1859 aa		2.7	□□□□□ -1.98
MSA1	YOR066W	YRF1-6	P53819	1859 aa		2.7	□□□□□ -1.98
MSA1	YOR066W	CDC8	P00572	216 aa		2.7	□□□□□ -1.98
MSA1	YOR066W	PUT1	P09368	476 aa		2.7	□□□□□ -1.98
MSA1	YOR066W	YLR156W	P0CE96	114 aa		2.7	□□□□□ -1.98
MSA1	YOR066W	YLR159W	P0CE97	114 aa		2.7	□□□□□ -1.98
MSA1	YOR066W	YLR161W	P0CE98	114 aa		2.7	□□□□□ -1.98
MSA1	YOR066W	SKG1	P36169	355 aa		2.7	□□□□□ -1.98
MSA1	YOR066W	AST2	P39945	430 aa	Known RBP	2.7	□□□□□ -1.98
MSA1	YOR066W	COG5	P53951	403 aa		2.7	□□□□□ -1.98
MSA1	YOR066W	VPS68	Q12016	184 aa		2.7	□□□□□ -1.98
MSA1	YOR066W	USB1	Q12208	290 aa	Known RBP	2.7	□□□□□ -1.98
MSA1	YOR066W	MAG1	P22134	296 aa	Known RBP	2.69	□□□□□ -1.98
MSA1	YOR066W	SCO1	P23833	295 aa		2.69	□□□□□ -1.98
MSA1	YOR066W	CAF4	P36130	643 aa		2.69	□□□□□ -1.98
MSA1	YOR066W	EGD2	P38879	174 aa	Known RBP	2.69	□□□□□ -1.98
MSA1	YOR066W	TRM12	Q04235	462 aa		2.69	□□□□□ -1.98
MSA1	YOR066W	GGA1	Q06336	557 aa		2.69	□□□□□ -1.98
MSA1	YOR066W	YPL162C	Q12042	273 aa		2.69	□□□□□ -1.98
MSA1	YOR066W	MHT1	Q12525	324 aa		2.69	□□□□□ -1.98
MSA1	YOR066W	RPO41	P13433	1351 aa	Known RBP	2.69	□□□□□ -1.98
MSA1	YOR066W	KSS1	P14681	368 aa		2.69	□□□□□ -1.98
MSA1	YOR066W	UTP30	P36144	274 aa	Known RBP	2.69	□□□□□ -1.98
MSA1	YOR066W	HMF1	P40037	129 aa	Known RBP	2.69	□□□□□ -1.98
MSA1	YOR066W	COS6	P53344	381 aa		2.69	□□□□□ -1.98
MSA1	YOR066W	ARR2	Q06597	130 aa		2.69	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms