RNA–Protein interactions for RNA: YOL123W

HRP1, Transcript of Subunit of cleavage factor I, yeast

Gene HRP1, Length 1,605 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRP1	YOL123W	APJ1	P53940	528 aa		4.61	□□□□□ -1.67
HRP1	YOL123W	MEH1	Q02205	184 aa		4.61	□□□□□ -1.67
HRP1	YOL123W	RSM10	Q03201	203 aa		4.61	□□□□□ -1.67
HRP1	YOL123W	YDR391C	Q04170	232 aa		4.61	□□□□□ -1.67
HRP1	YOL123W	PRS5	Q12265	496 aa	Known RBP	4.61	□□□□□ -1.67
HRP1	YOL123W	ACC1	Q00955	2233 aa	Known RBP	4.6	□□□□□ -1.67
HRP1	YOL123W	TDH1	P00360	332 aa	Known RBP	4.6	□□□□□ -1.67
HRP1	YOL123W	RPL7A	P05737	244 aa	Known RBP	4.6	□□□□□ -1.67
HRP1	YOL123W	SEC62	P21825	274 aa		4.6	□□□□□ -1.67
HRP1	YOL123W	MRPS5	P33759	307 aa		4.6	□□□□□ -1.67
HRP1	YOL123W	RPB7	P34087	171 aa		4.6	□□□□□ -1.67
HRP1	YOL123W	ERV15	P38312	142 aa		4.6	□□□□□ -1.67
HRP1	YOL123W	MTC6	P38849	526 aa		4.6	□□□□□ -1.67
HRP1	YOL123W	YER079W	P40052	210 aa	Known RBP	4.6	□□□□□ -1.67
HRP1	YOL123W	YIL024C	P40543	189 aa		4.6	□□□□□ -1.67
HRP1	YOL123W	YCL001W-A	P87012	153 aa		4.6	□□□□□ -1.67
HRP1	YOL123W	RCE1	Q03530	315 aa		4.6	□□□□□ -1.67
HRP1	YOL123W	SDO1	Q07953	250 aa	Known RBP	4.6	□□□□□ -1.67
HRP1	YOL123W	RKI1	Q12189	258 aa		4.6	□□□□□ -1.67
HRP1	YOL123W	NCE102	Q12207	173 aa	RIP-Chip data	4.6	□□□□□ -1.67	not detected
HRP1	YOL123W	RPL7B	Q12213	244 aa	Known RBP	4.6	□□□□□ -1.67
HRP1	YOL123W	YPR108W-A	Q3E7B3	70 aa		4.6	□□□□□ -1.67
HRP1	YOL123W	PCC1	Q3E833	88 aa		4.6	□□□□□ -1.67
HRP1	YOL123W	MRP2	P10663	115 aa	Predicted RBP	4.59	□□□□□ -1.67
HRP1	YOL123W	MSI1	P13712	422 aa		4.59	□□□□□ -1.67
HRP1	YOL123W	MSK1	P32048	576 aa		4.59	□□□□□ -1.67
HRP1	YOL123W	ERG2	P32352	222 aa		4.59	□□□□□ -1.67
HRP1	YOL123W	YKL162C	P36052	402 aa		4.59	□□□□□ -1.67
HRP1	YOL123W	SHG1	P38337	142 aa		4.59	□□□□□ -1.67
HRP1	YOL123W	PRS2	P38620	318 aa	Known RBP	4.59	□□□□□ -1.67
HRP1	YOL123W	SEC24	P40482	926 aa	Known RBP	4.59	□□□□□ -1.67
HRP1	YOL123W	OST1	P41543	476 aa	Known RBP	4.59	□□□□□ -1.67
HRP1	YOL123W	MRX5	P47007	382 aa		4.59	□□□□□ -1.67
HRP1	YOL123W	YJR012C	P47087	207 aa		4.59	□□□□□ -1.67
HRP1	YOL123W	YIF1	P53845	314 aa	Known RBP	4.59	□□□□□ -1.67
HRP1	YOL123W	MRPS17	Q03246	237 aa	Predicted RBP	4.59	□□□□□ -1.67
HRP1	YOL123W	TSA2	Q04120	196 aa		4.59	□□□□□ -1.67
HRP1	YOL123W	YPR098C	Q06089	161 aa		4.59	□□□□□ -1.67
HRP1	YOL123W	PIN3	Q06449	215 aa		4.59	□□□□□ -1.67
HRP1	YOL123W	ATP16	Q12165	160 aa		4.59	□□□□□ -1.67
HRP1	YOL123W	FRE8	Q12209	686 aa		4.59	□□□□□ -1.67
HRP1	YOL123W	MRS4	P23500	304 aa		4.58	□□□□□ -1.68
HRP1	YOL123W	ATG15	P25641	520 aa		4.58	□□□□□ -1.68
HRP1	YOL123W	SIP1	P32578	815 aa		4.58	□□□□□ -1.68
HRP1	YOL123W	ECM31	P38122	312 aa		4.58	□□□□□ -1.68
HRP1	YOL123W	SWD3	P38123	315 aa		4.58	□□□□□ -1.68
HRP1	YOL123W	PAC2	P39937	518 aa		4.58	□□□□□ -1.68
HRP1	YOL123W	YEL057C	P39983	233 aa		4.58	□□□□□ -1.68
HRP1	YOL123W	YEA4	P40004	342 aa		4.58	□□□□□ -1.68
HRP1	YOL123W	YER084W	P40057	128 aa		4.58	□□□□□ -1.68
HRP1	YOL123W	RFC2	P40348	353 aa		4.58	□□□□□ -1.68
HRP1	YOL123W	FLX1	P40464	311 aa		4.58	□□□□□ -1.68
HRP1	YOL123W	QRI1	P43123	477 aa	Known RBP	4.58	□□□□□ -1.68
HRP1	YOL123W	YJR056C	P47115	236 aa		4.58	□□□□□ -1.68
HRP1	YOL123W	CAF40	P53829	373 aa		4.58	□□□□□ -1.68
HRP1	YOL123W	YDR415C	Q04033	374 aa	Predicted RBP	4.58	□□□□□ -1.68
HRP1	YOL123W	YMR254C	Q04838	102 aa		4.58	□□□□□ -1.68
HRP1	YOL123W	RAF1	Q06891	181 aa		4.58	□□□□□ -1.68
HRP1	YOL123W	YOL029C	Q08187	201 aa		4.58	□□□□□ -1.68
HRP1	YOL123W	FIT3	Q08907	204 aa		4.58	□□□□□ -1.68
HRP1	YOL123W	MPD1	Q12404	318 aa	Known RBP	4.58	□□□□□ -1.68
HRP1	YOL123W	HUG1	Q6Q5K6	68 aa		4.58	□□□□□ -1.68
HRP1	YOL123W	IMP1	P28627	190 aa		4.57	□□□□□ -1.68
HRP1	YOL123W	RPS0A	P32905	252 aa	Known RBP	4.57	□□□□□ -1.68
HRP1	YOL123W	YUH1	P35127	236 aa		4.57	□□□□□ -1.68
HRP1	YOL123W	SLM6	P38343	150 aa		4.57	□□□□□ -1.68
HRP1	YOL123W	SPC25	P40014	221 aa		4.57	□□□□□ -1.68
HRP1	YOL123W	PRM5	P40476	318 aa		4.57	□□□□□ -1.68
HRP1	YOL123W	SLM1	P40485	686 aa		4.57	□□□□□ -1.68
HRP1	YOL123W	MSO1	P53604	210 aa	Known RBP	4.57	□□□□□ -1.68
HRP1	YOL123W	RRS1	Q08746	203 aa	Known RBP	4.57	□□□□□ -1.68
HRP1	YOL123W	COX19	Q3E731	98 aa		4.57	□□□□□ -1.68
HRP1	YOL123W	ATG40	Q99325	256 aa		4.57	□□□□□ -1.68
HRP1	YOL123W	GDH1	P07262	454 aa	Known RBP	4.57	□□□□□ -1.68
HRP1	YOL123W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
HRP1	YOL123W	MOH1	P38191	138 aa		4.57	□□□□□ -1.68
HRP1	YOL123W	NTC20	P38302	140 aa	Predicted RBP	4.57	□□□□□ -1.68
HRP1	YOL123W	IKI1	P38874	309 aa		4.57	□□□□□ -1.68
HRP1	YOL123W	POG1	P40473	351 aa		4.57	□□□□□ -1.68
HRP1	YOL123W	EGT2	P42835	1041 aa		4.57	□□□□□ -1.68
HRP1	YOL123W	YIP5	P53108	310 aa		4.57	□□□□□ -1.68
HRP1	YOL123W	HHO1	P53551	258 aa		4.57	□□□□□ -1.68
HRP1	YOL123W	SKO1	Q02100	647 aa		4.57	□□□□□ -1.68
HRP1	YOL123W	YMR279C	Q03263	540 aa		4.57	□□□□□ -1.68
HRP1	YOL123W	YMR082C	Q04276	118 aa		4.57	□□□□□ -1.68
HRP1	YOL123W	UPS1	Q05776	175 aa		4.57	□□□□□ -1.68
HRP1	YOL123W	AIM45	Q12480	344 aa	Known RBP	4.57	□□□□□ -1.68
HRP1	YOL123W	YOR192C-C	Q3E736	78 aa		4.57	□□□□□ -1.68
HRP1	YOL123W	COA2	Q3E823	68 aa		4.57	□□□□□ -1.68
HRP1	YOL123W	RPL35A	P0CX84	120 aa	Known RBP	4.56	□□□□□ -1.68
HRP1	YOL123W	RPL35B	P0CX85	120 aa	Known RBP	4.56	□□□□□ -1.68
HRP1	YOL123W	YPT10	P38146	199 aa		4.56	□□□□□ -1.68
HRP1	YOL123W	YMR262W	P38430	313 aa		4.56	□□□□□ -1.68
HRP1	YOL123W	PRS3	P38689	320 aa	Known RBP	4.56	□□□□□ -1.68
HRP1	YOL123W	PHB1	P40961	287 aa		4.56	□□□□□ -1.68
HRP1	YOL123W	SIP18	P50263	79 aa		4.56	□□□□□ -1.68
HRP1	YOL123W	YNR066C	P53752	436 aa		4.56	□□□□□ -1.68
HRP1	YOL123W	YPL077C	Q02831	240 aa		4.56	□□□□□ -1.68
HRP1	YOL123W	YDC1	Q02896	317 aa		4.56	□□□□□ -1.68
HRP1	YOL123W	SNO1	Q03144	224 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms