RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB2	YNL209W	MCH4	Q08268	501 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	YOR385W	Q08909	290 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	FSF1	Q12029	327 aa	Known RBP	4.07	□□□□□ -1.76
SSB2	YNL209W	POM33	Q12164	279 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	RRI1	Q12468	440 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	VPS63	O13549	108 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	SEC22	P22214	214 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	FMT1	P32785	401 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	MRPL27	P36526	146 aa	Predicted RBP	4.07	□□□□□ -1.76
SSB2	YNL209W	YIL169C	P40442	995 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	GLC8	P41818	229 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	MOG1	P47123	218 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	MSY1	P48527	492 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	SMX3	P54999	86 aa	Predicted RBP	4.07	□□□□□ -1.76
SSB2	YNL209W	YPL067C	Q02754	198 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	YPL039W	Q03080	316 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	SDC1	Q03323	175 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	DIG2	Q03373	323 aa	Known RBP	4.07	□□□□□ -1.76
SSB2	YNL209W	YML018C	Q03730	393 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	NUP53	Q03790	475 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	HNT1	Q04344	158 aa	Known RBP	4.07	□□□□□ -1.76
SSB2	YNL209W	YLR108C	Q12259	485 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	PCC1	Q3E833	88 aa		4.07	□□□□□ -1.76
SSB2	YNL209W	COX5B	P00425	151 aa		4.06	□□□□□ -1.76
SSB2	YNL209W	MES1	P00958	751 aa	Known RBP	4.06	□□□□□ -1.76
SSB2	YNL209W	PUT1	P09368	476 aa		4.06	□□□□□ -1.76
SSB2	YNL209W	YLL053C	P0CD98	152 aa		4.06	□□□□□ -1.76
SSB2	YNL209W	CUP2	P15315	225 aa		4.06	□□□□□ -1.76
SSB2	YNL209W	POP8	P38208	133 aa		4.06	□□□□□ -1.76
SSB2	YNL209W	ARO9	P38840	513 aa	Predicted RBP	4.06	□□□□□ -1.76
SSB2	YNL209W	COX15	P40086	486 aa		4.06	□□□□□ -1.76
SSB2	YNL209W	HIT1	P46973	164 aa		4.06	□□□□□ -1.76
SSB2	YNL209W	YDR366C	P87287	132 aa		4.06	□□□□□ -1.76
SSB2	YNL209W	SLO1	Q3E784	85 aa		4.06	□□□□□ -1.76
SSB2	YNL209W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.06	□□□□□ -1.76
SSB2	YNL209W	TOR2	P32600	2474 aa	Known RBP	4.06	□□□□□ -1.76
SSB2	YNL209W	COX2	P00410	251 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	NAM2	P11325	894 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	CDC34	P14682	295 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	PPZ2	P33329	710 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	YER188W	P40103	239 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	SLZ1	P40167	298 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	YJR012C	P47087	207 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	HSV2	P50079	448 aa	Predicted RBP	4.05	□□□□□ -1.76
SSB2	YNL209W	MOT3	P54785	490 aa	Known RBP	4.05	□□□□□ -1.76
SSB2	YNL209W	ATG33	Q06485	197 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	RRT7	Q07829	113 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	THI72	Q08579	599 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	NIP7	Q08962	181 aa	Known RBP	4.05	□□□□□ -1.76
SSB2	YNL209W	FCF2	Q12035	217 aa	Predicted RBP	4.05	□□□□□ -1.76
SSB2	YNL209W	SWT1	Q12104	458 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	USB1	Q12208	290 aa	Known RBP	4.05	□□□□□ -1.76
SSB2	YNL209W	MCT1	Q12283	360 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	YIR021W-A	Q3E739	70 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	YKR073C	P36153	106 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	SRP14	P38985	146 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	PAC2	P39937	518 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	GAT2	P40209	560 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	YMR144W	P40214	342 aa	Known RBP	4.05	□□□□□ -1.76
SSB2	YNL209W	GLR1	P41921	483 aa	Known RBP	4.05	□□□□□ -1.76
SSB2	YNL209W	ECO1	P43605	281 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	CTK2	P46962	323 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	PHO23	P50947	330 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	ANT1	Q06497	328 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	HNT3	Q08702	217 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	RAD28	Q12021	506 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	TFC7	Q12415	435 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	YCR075W-A	Q3E830	75 aa		4.05	□□□□□ -1.76
SSB2	YNL209W	BLM10	P43583	2143 aa		4.04	□□□□□ -1.76
SSB2	YNL209W	GLT1	Q12680	2145 aa	Known RBP	4.04	□□□□□ -1.76
SSB2	YNL209W	FLO9	P39712	1322 aa		4.04	□□□□□ -1.76
SSB2	YNL209W	YPT1	P01123	206 aa	Known RBP	4.04	□□□□□ -1.76
SSB2	YNL209W	RPS16A	P0CX51	143 aa	Known RBP	4.04	□□□□□ -1.76
SSB2	YNL209W	RPS16B	P0CX52	143 aa	Known RBP	4.04	□□□□□ -1.76
SSB2	YNL209W	YKL075C	P36083	450 aa		4.04	□□□□□ -1.76
SSB2	YNL209W	FLO10	P36170	1169 aa		4.04	□□□□□ -1.76
SSB2	YNL209W	IKI1	P38874	309 aa		4.04	□□□□□ -1.76
SSB2	YNL209W	PSD1	P39006	500 aa		4.04	□□□□□ -1.76
SSB2	YNL209W	SNU13	P39990	126 aa	Known RBP	4.04	□□□□□ -1.76
SSB2	YNL209W	YND1	P40009	630 aa		4.04	□□□□□ -1.76
SSB2	YNL209W	BMT5	P40493	336 aa		4.04	□□□□□ -1.76
SSB2	YNL209W	RPA43	P46669	326 aa		4.04	□□□□□ -1.76
SSB2	YNL209W	GWT1	P47026	490 aa		4.04	□□□□□ -1.76
SSB2	YNL209W	PRY1	P47032	299 aa		4.04	□□□□□ -1.76
SSB2	YNL209W	AVT4	P50944	713 aa		4.04	□□□□□ -1.76
SSB2	YNL209W	YGR151C	P53287	111 aa		4.04	□□□□□ -1.76
SSB2	YNL209W	UPS3	Q04006	179 aa		4.04	□□□□□ -1.76
SSB2	YNL209W	NOC4	Q06512	552 aa	Predicted RBP	4.04	□□□□□ -1.76
SSB2	YNL209W	SYM1	Q06563	197 aa		4.04	□□□□□ -1.76
SSB2	YNL209W	FCY22	Q12119	530 aa		4.04	□□□□□ -1.76
SSB2	YNL209W	HUT1	Q12520	339 aa		4.04	□□□□□ -1.76
SSB2	YNL209W	ARO2	P28777	376 aa	Known RBP	4.03	□□□□□ -1.76
SSB2	YNL209W	SRB6	P32570	121 aa		4.03	□□□□□ -1.76
SSB2	YNL209W	EMP24	P32803	203 aa	Known RBP	4.03	□□□□□ -1.76
SSB2	YNL209W	PDC2	P32896	925 aa		4.03	□□□□□ -1.76
SSB2	YNL209W	PRY2	P36110	329 aa		4.03	□□□□□ -1.76
SSB2	YNL209W	RPS26A	P39938	119 aa	Known RBP	4.03	□□□□□ -1.76
SSB2	YNL209W	RPS26B	P39939	119 aa	Known RBP	4.03	□□□□□ -1.76
SSB2	YNL209W	OXA1	P39952	402 aa		4.03	□□□□□ -1.76
SSB2	YNL209W	SWM2	P40342	146 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms