RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeastyeast

Gene PKR1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PKR1YMR123W TRM12Q04235 462 aa1.21□□□□□ -2.22
PKR1YMR123W SPG4Q04438 115 aa1.21□□□□□ -2.22
PKR1YMR123W YPR098CQ06089 161 aa1.21□□□□□ -2.22
PKR1YMR123W RRP40Q08285 240 aaKnown RBP1.21□□□□□ -2.22
PKR1YMR123W AKR2Q12013 749 aa1.21□□□□□ -2.22
PKR1YMR123W YRA1Q12159 226 aaKnown RBP1.21□□□□□ -2.22
PKR1YMR123W YOR342CQ12182 319 aa1.21□□□□□ -2.22
PKR1YMR123W TPO4Q12256 659 aa1.21□□□□□ -2.22
PKR1YMR123W YOR097CQ12274 175 aaPredicted RBP1.21□□□□□ -2.22
PKR1YMR123W GTT2Q12390 233 aa1.21□□□□□ -2.22
PKR1YMR123W QCR6P00127 147 aa1.2□□□□□ -2.22
PKR1YMR123W NSP1P14907 823 aaKnown RBP1.2□□□□□ -2.22
PKR1YMR123W RNA15P25299 296 aaPredicted RBP1.2□□□□□ -2.22
PKR1YMR123W YCR099CP25657 155 aa1.2□□□□□ -2.22
PKR1YMR123W RPS5P26783 225 aaKnown RBP1.2□□□□□ -2.22
PKR1YMR123W RCN1P36054 211 aa1.2□□□□□ -2.22
PKR1YMR123W HOC1P47124 396 aa1.2□□□□□ -2.22
PKR1YMR123W YGL159WP53110 370 aa1.2□□□□□ -2.22
PKR1YMR123W YNL046WP53956 172 aa1.2□□□□□ -2.22
PKR1YMR123W YLR173WQ06247 608 aa1.2□□□□□ -2.22
PKR1YMR123W ATG17Q06410 417 aa1.2□□□□□ -2.22
PKR1YMR123W YOR186WQ08560 144 aa1.2□□□□□ -2.22
PKR1YMR123W MDM32Q12171 622 aa1.2□□□□□ -2.22
PKR1YMR123W YLR462WO13556 202 aa1.19□□□□□ -2.22
PKR1YMR123W RAS2P01120 322 aaKnown RBP1.19□□□□□ -2.22
PKR1YMR123W CDC7P06243 507 aa1.19□□□□□ -2.22
PKR1YMR123W RPS27AP35997 82 aaKnown RBP1.19□□□□□ -2.22
PKR1YMR123W YPT52P36018 234 aaKnown RBP1.19□□□□□ -2.22
PKR1YMR123W RPS27BP38711 82 aa1.19□□□□□ -2.22
PKR1YMR123W COS8P38723 381 aa1.19□□□□□ -2.22
PKR1YMR123W YHR127WP38833 243 aaKnown RBP1.19□□□□□ -2.22
PKR1YMR123W BFR1P38934 470 aaKnown RBP RIP-Chip data1.19□□□□□ -2.22not detected
PKR1YMR123W GOT1Q03554 138 aa1.19□□□□□ -2.22
PKR1YMR123W YDR124WQ04608 324 aa1.19□□□□□ -2.22
PKR1YMR123W YCT1Q12235 531 aa1.19□□□□□ -2.22
PKR1YMR123W Q0255P03881 472 aa1.18□□□□□ -2.22
PKR1YMR123W FBA1P14540 359 aaKnown RBP1.18□□□□□ -2.22
PKR1YMR123W PHO13P19881 312 aa1.18□□□□□ -2.22
PKR1YMR123W TAH1P25638 111 aaPredicted RBP1.18□□□□□ -2.22
PKR1YMR123W ADE1P27616 306 aa1.18□□□□□ -2.22
PKR1YMR123W PEX4P29340 183 aa1.18□□□□□ -2.22
PKR1YMR123W YKL075CP36083 450 aa1.18□□□□□ -2.22
PKR1YMR123W THO1P40040 218 aaKnown RBP1.18□□□□□ -2.22
PKR1YMR123W YER135CP40082 130 aa1.18□□□□□ -2.22
PKR1YMR123W ARC15P40518 154 aaRIP-Chip data1.18□□□□□ -2.22not detected
PKR1YMR123W SYC1Q08553 188 aaPredicted RBP1.18□□□□□ -2.22
PKR1YMR123W CSM4Q08955 156 aa1.18□□□□□ -2.22
PKR1YMR123W YLR126CQ12288 251 aa1.18□□□□□ -2.22
PKR1YMR123W MATALPHA1P0CY06 175 aa1.17□□□□□ -2.22
PKR1YMR123W HMLALPHA1P0CY07 175 aa1.17□□□□□ -2.22
PKR1YMR123W RPO26P20435 155 aa1.17□□□□□ -2.22
PKR1YMR123W MGT1P26188 188 aa1.17□□□□□ -2.22
PKR1YMR123W ERG24P32462 438 aaKnown RBP1.17□□□□□ -2.22
PKR1YMR123W SUI1P32911 108 aaKnown RBP1.17□□□□□ -2.22
PKR1YMR123W POP4P38336 279 aa1.17□□□□□ -2.22
PKR1YMR123W SSH1P38353 490 aaKnown RBP1.17□□□□□ -2.22
PKR1YMR123W TCD1P38756 429 aa1.17□□□□□ -2.22
PKR1YMR123W YHR125WP38831 101 aa1.17□□□□□ -2.22
PKR1YMR123W ICE2P40499 491 aa1.17□□□□□ -2.22
PKR1YMR123W YRB1P41920 201 aaKnown RBP1.17□□□□□ -2.22
PKR1YMR123W YJR149WP47177 404 aa1.17□□□□□ -2.22
PKR1YMR123W BOL2P53082 120 aa1.17□□□□□ -2.22
PKR1YMR123W RRN5Q02983 363 aa1.17□□□□□ -2.22
PKR1YMR123W SRL4Q03085 281 aa1.17□□□□□ -2.22
PKR1YMR123W YMR279CQ03263 540 aa1.17□□□□□ -2.22
PKR1YMR123W MIX14Q04341 121 aa1.17□□□□□ -2.22
PKR1YMR123W SEI1Q06058 285 aa1.17□□□□□ -2.22
PKR1YMR123W PAM18Q07914 168 aa1.17□□□□□ -2.22
PKR1YMR123W RRS1Q08746 203 aaKnown RBP1.17□□□□□ -2.22
PKR1YMR123W DAS2Q12084 232 aa1.17□□□□□ -2.22
PKR1YMR123W SEC16P48415 2195 aaKnown RBP1.17□□□□□ -2.22
PKR1YMR123W FLO9P39712 1322 aa1.16□□□□□ -2.22
PKR1YMR123W YSF3P0C074 85 aaPredicted RBP1.16□□□□□ -2.22
PKR1YMR123W YFR010W-AP0C5N0 62 aa1.16□□□□□ -2.22
PKR1YMR123W ERD2P18414 219 aa1.16□□□□□ -2.22
PKR1YMR123W STP22P25604 385 aa1.16□□□□□ -2.22
PKR1YMR123W SRB4P32569 687 aa1.16□□□□□ -2.22
PKR1YMR123W APQ12P40532 138 aa1.16□□□□□ -2.22
PKR1YMR123W TOS8P53147 276 aa1.16□□□□□ -2.22
PKR1YMR123W YGR026WP53217 278 aa1.16□□□□□ -2.22
PKR1YMR123W LSM3P57743 89 aaKnown RBP1.16□□□□□ -2.22
PKR1YMR123W CDC123Q05791 360 aa1.16□□□□□ -2.22
PKR1YMR123W YPR172WQ06608 200 aa1.16□□□□□ -2.22
PKR1YMR123W YPR174CQ06616 221 aaPredicted RBP1.16□□□□□ -2.22
PKR1YMR123W Q0144Q9ZZW2 109 aa1.16□□□□□ -2.22
PKR1YMR123W CMD1P06787 147 aaKnown RBP1.15□□□□□ -2.23
PKR1YMR123W DSF1P0CX08 502 aa1.15□□□□□ -2.23
PKR1YMR123W YNR073CP0CX09 502 aa1.15□□□□□ -2.23
PKR1YMR123W RPB4P20433 221 aaPredicted RBP1.15□□□□□ -2.23
PKR1YMR123W SEC14P24280 304 aaKnown RBP1.15□□□□□ -2.23
PKR1YMR123W MDH3P32419 343 aaKnown RBP RIP-Chip data1.15□□□□□ -2.23not detected
PKR1YMR123W PTM1P32857 523 aa1.15□□□□□ -2.23
PKR1YMR123W UBC6P33296 250 aaPredicted RBP1.15□□□□□ -2.23
PKR1YMR123W VPS51P36116 164 aa1.15□□□□□ -2.23
PKR1YMR123W MRPL39P36533 70 aa1.15□□□□□ -2.23
PKR1YMR123W FES1P38260 290 aa1.15□□□□□ -2.23
PKR1YMR123W RPA43P46669 326 aa1.15□□□□□ -2.23
PKR1YMR123W RAD17P48581 401 aa1.15□□□□□ -2.23
PKR1YMR123W NHP10Q03435 203 aa1.15□□□□□ -2.23
PKR1YMR123W GAS3Q03655 524 aa1.15□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms