RNA–Protein interactions for RNA: YKL196C

YKT6, Transcript of Vesicle membrane protein (v-SNARE) with acyltransferase activity, yeast

Gene YKT6, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKT6	YKL196C	RNH202	Q05635	350 aa		3	□□□□□ -1.93
YKT6	YKL196C	UPS1	Q05776	175 aa		3	□□□□□ -1.93
YKT6	YKL196C	CTR3	Q06686	241 aa		3	□□□□□ -1.93
YKT6	YKL196C	YOR387C	Q08910	206 aa		3	□□□□□ -1.93
YKT6	YKL196C	YLR049C	Q12110	428 aa		3	□□□□□ -1.93
YKT6	YKL196C	NUP159	P40477	1460 aa		3	□□□□□ -1.93
YKT6	YKL196C	ESC1	Q03661	1658 aa	Known RBP	3	□□□□□ -1.93
YKT6	YKL196C	BNI1	P41832	1953 aa		3	□□□□□ -1.93
YKT6	YKL196C	GCN2	P15442	1659 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	FMP49	A0A023PZB3	126 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	ILV1	P00927	576 aa	Known RBP	2.99	□□□□□ -1.93
YKT6	YKL196C	RAD52	P06778	471 aa	Known RBP	2.99	□□□□□ -1.93
YKT6	YKL196C	BUB3	P26449	341 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	YSC83	P32792	385 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	MRPL6	P32904	214 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	YKL187C	P34231	750 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	POP8	P38208	133 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	YBR013C	P38215	129 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	SLM6	P38343	150 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	BAT1	P38891	393 aa	Known RBP	2.99	□□□□□ -1.93
YKT6	YKL196C	YEL075C	P39972	122 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	YFR045W	P43617	309 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	YGL260W	P53056	76 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	SYF2	P53277	215 aa	Predicted RBP	2.99	□□□□□ -1.93
YKT6	YKL196C	CPD1	P53314	239 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	RIP-Chip
YKT6	YKL196C	FMP41	P53889	259 aa	Known RBP	2.99	□□□□□ -1.93
YKT6	YKL196C	APJ1	P53940	528 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	GPI15	P53961	229 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	RCE1	Q03530	315 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	THI74	Q04083	370 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	CUE4	Q04201	117 aa	Predicted RBP	2.99	□□□□□ -1.93
YKT6	YKL196C	HRI1	Q05905	244 aa	Known RBP	2.99	□□□□□ -1.93
YKT6	YKL196C	UTP23	Q12339	254 aa	Known RBP	2.99	□□□□□ -1.93
YKT6	YKL196C	PST1	Q12355	444 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	EAF3	Q12432	401 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	AIM45	Q12480	344 aa	Known RBP	2.99	□□□□□ -1.93
YKT6	YKL196C	PCC1	Q3E833	88 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	HIR3	P47171	1648 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	ULS1	Q08562	1619 aa		2.99	□□□□□ -1.93
YKT6	YKL196C	DNA2	P38859	1522 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	COX4	P04037	155 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	STE7	P06784	515 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	RIP1	P08067	215 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	YER039C-A	P0CD97	72 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	BAR1	P12630	587 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	INO4	P13902	151 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	RPB3	P16370	318 aa	Known RBP	2.98	□□□□□ -1.93
YKT6	YKL196C	RPS2	P25443	254 aa	Known RBP	2.98	□□□□□ -1.93
YKT6	YKL196C	POP5	P28005	173 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	CLB6	P32943	380 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	KTI12	P34253	313 aa	Known RBP	2.98	□□□□□ -1.93
YKT6	YKL196C	SHB17	P36136	271 aa	Known RBP	2.98	□□□□□ -1.93
YKT6	YKL196C	LAG1	P38703	411 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	YHL049C	P38722	271 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	RRP4	P38792	359 aa	Known RBP	2.98	□□□□□ -1.93
YKT6	YKL196C	TRR2	P38816	342 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	MDM31	P38880	579 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	RPB11	P38902	120 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	LYS1	P38998	373 aa	RIP-Chip data	2.98	□□□□□ -1.93	not detected
YKT6	YKL196C	HMF1	P40037	129 aa	Known RBP	2.98	□□□□□ -1.93
YKT6	YKL196C	SMX2	P40204	77 aa	Known RBP	2.98	□□□□□ -1.93
YKT6	YKL196C	YIL059C	P40520	121 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	YGL230C	P53074	147 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	HSK3	P69852	69 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	OSH6	Q02201	448 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	VBA1	Q04301	562 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	YMR317W	Q04893	1140 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	ECI1	Q05871	280 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	SNT309	Q06091	175 aa	Predicted RBP	2.98	□□□□□ -1.93
YKT6	YKL196C	RRS1	Q08746	203 aa	Known RBP	2.98	□□□□□ -1.93
YKT6	YKL196C	MMT2	Q08970	484 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	SME1	Q12330	94 aa	Predicted RBP	2.98	□□□□□ -1.93
YKT6	YKL196C	ORT1	Q12375	292 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	ATG5	Q12380	294 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	YLR412C-A	Q3E742	68 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	YNL277W-A	Q3E7Z0	62 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	DDP1	Q99321	188 aa	Known RBP	2.98	□□□□□ -1.93
YKT6	YKL196C	RRP5	Q05022	1729 aa	Known RBP	2.98	□□□□□ -1.93
YKT6	YKL196C	PDR12	Q02785	1511 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	SWR1	Q05471	1514 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	CHC1	P22137	1653 aa	Known RBP	2.98	□□□□□ -1.93
YKT6	YKL196C	MLP2	P40457	1679 aa		2.98	□□□□□ -1.93
YKT6	YKL196C	MLP1	Q02455	1875 aa	Known RBP	2.97	□□□□□ -1.93
YKT6	YKL196C	BPT1	P14772	1559 aa		2.97	□□□□□ -1.93
YKT6	YKL196C	COX3	P00420	269 aa		2.97	□□□□□ -1.93
YKT6	YKL196C	SUC2	P00724	532 aa		2.97	□□□□□ -1.93
YKT6	YKL196C	PPH21	P23594	369 aa		2.97	□□□□□ -1.93
YKT6	YKL196C	NDT80	P38830	627 aa		2.97	□□□□□ -1.93
YKT6	YKL196C	YPL073C	P40323	161 aa		2.97	□□□□□ -1.93
YKT6	YKL196C	DLS1	P40366	167 aa		2.97	□□□□□ -1.93
YKT6	YKL196C	POP1	P41812	875 aa		2.97	□□□□□ -1.93
YKT6	YKL196C	SDT1	P53078	280 aa		2.97	□□□□□ -1.93
YKT6	YKL196C	YGR015C	P53208	328 aa		2.97	□□□□□ -1.93
YKT6	YKL196C	THG1	P53215	237 aa	Known RBP	2.97	□□□□□ -1.93
YKT6	YKL196C	YNR048W	P53740	393 aa		2.97	□□□□□ -1.93
YKT6	YKL196C	PGA1	P53896	198 aa		2.97	□□□□□ -1.93
YKT6	YKL196C	YNL095C	P53932	642 aa		2.97	□□□□□ -1.93
YKT6	YKL196C	CRZ1	P53968	678 aa		2.97	□□□□□ -1.93
YKT6	YKL196C	GRH1	Q04410	372 aa	Known RBP	2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 89.5 ms