RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W YPT31P38555 223 aaKnown RBP6.47□□□□□ -1.37
PEX28YHR150W PEX7P39108 375 aa6.47□□□□□ -1.37
PEX28YHR150W FLX1P40464 311 aa6.47□□□□□ -1.37
PEX28YHR150W PHS1P40857 217 aa6.47□□□□□ -1.37
PEX28YHR150W PRY1P47032 299 aa6.47□□□□□ -1.37
PEX28YHR150W ERG25P53045 309 aa6.47□□□□□ -1.37
PEX28YHR150W SMM1P53720 384 aaKnown RBP6.47□□□□□ -1.37
PEX28YHR150W ELA1P53861 379 aaPredicted RBP6.47□□□□□ -1.37
PEX28YHR150W ATG4P53867 494 aa6.47□□□□□ -1.37
PEX28YHR150W RSM10Q03201 203 aa6.47□□□□□ -1.37
PEX28YHR150W YDR387CQ04162 555 aa6.47□□□□□ -1.37
PEX28YHR150W SEN15Q04675 128 aa6.47□□□□□ -1.37
PEX28YHR150W PML1Q07930 204 aaPredicted RBP6.47□□□□□ -1.37
PEX28YHR150W GRE1Q08969 168 aa6.47□□□□□ -1.37
PEX28YHR150W USB1Q12208 290 aaKnown RBP6.47□□□□□ -1.37
PEX28YHR150W FRE8Q12209 686 aa6.47□□□□□ -1.37
PEX28YHR150W CDC50P25656 391 aa6.46□□□□□ -1.38
PEX28YHR150W MRPL28P36527 147 aa6.46□□□□□ -1.38
PEX28YHR150W SWD3P38123 315 aa6.46□□□□□ -1.38
PEX28YHR150W YBR096WP38256 230 aa6.46□□□□□ -1.38
PEX28YHR150W RTS2P40962 232 aa6.46□□□□□ -1.38
PEX28YHR150W PUS4P48567 403 aaKnown RBP6.46□□□□□ -1.38
PEX28YHR150W YGL185CP53100 379 aa6.46□□□□□ -1.38
PEX28YHR150W PCP1P53259 346 aa6.46□□□□□ -1.38
PEX28YHR150W PAU4P53427 120 aa6.46□□□□□ -1.38
PEX28YHR150W YNL165WP53891 406 aa6.46□□□□□ -1.38
PEX28YHR150W COQ11Q05892 277 aa6.46□□□□□ -1.38
PEX28YHR150W YLR118CQ12354 227 aa6.46□□□□□ -1.38
PEX28YHR150W ATG5Q12380 294 aa6.46□□□□□ -1.38
PEX28YHR150W IZH2Q12442 317 aa6.46□□□□□ -1.38
PEX28YHR150W FLO9P39712 1322 aa6.46□□□□□ -1.38
PEX28YHR150W SPS4P09937 338 aa6.45□□□□□ -1.38
PEX28YHR150W RPB10P22139 70 aa6.45□□□□□ -1.38
PEX28YHR150W LDB16P25587 256 aa6.45□□□□□ -1.38
PEX28YHR150W ERV1P27882 189 aa6.45□□□□□ -1.38
PEX28YHR150W MRPS9P38120 278 aa6.45□□□□□ -1.38
PEX28YHR150W MGE1P38523 228 aa6.45□□□□□ -1.38
PEX28YHR150W HNT2P49775 206 aa6.45□□□□□ -1.38
PEX28YHR150W YOL118CQ08259 102 aa6.45□□□□□ -1.38
PEX28YHR150W ALG6Q12001 544 aaKnown RBP6.45□□□□□ -1.38
PEX28YHR150W YDL180WQ12301 547 aa6.45□□□□□ -1.38
PEX28YHR150W YOR192C-CQ3E736 78 aa6.45□□□□□ -1.38
PEX28YHR150W CBP6P07253 162 aaPredicted RBP6.45□□□□□ -1.38
PEX28YHR150W TY1A-HP0C2I4 478 aaKnown RBP6.45□□□□□ -1.38
PEX28YHR150W DEG1P31115 442 aaKnown RBP6.45□□□□□ -1.38
PEX28YHR150W ALK2P32789 676 aaPredicted RBP6.45□□□□□ -1.38
PEX28YHR150W AVT5P38176 459 aa6.45□□□□□ -1.38
PEX28YHR150W TRS20P38334 175 aa6.45□□□□□ -1.38
PEX28YHR150W WSS1P38838 269 aa6.45□□□□□ -1.38
PEX28YHR150W RPS26AP39938 119 aaKnown RBP6.45□□□□□ -1.38
PEX28YHR150W RPS26BP39939 119 aaKnown RBP6.45□□□□□ -1.38
PEX28YHR150W YER079WP40052 210 aaKnown RBP6.45□□□□□ -1.38
PEX28YHR150W SMD3P43321 101 aaKnown RBP6.45□□□□□ -1.38
PEX28YHR150W TNA1P53322 534 aa6.45□□□□□ -1.38
PEX28YHR150W AVO2Q04749 426 aa6.45□□□□□ -1.38
PEX28YHR150W PAM18Q07914 168 aa6.45□□□□□ -1.38
PEX28YHR150W NCE102Q12207 173 aaRIP-Chip data6.45□□□□□ -1.38not detected
PEX28YHR150W RIP1P08067 215 aa6.44□□□□□ -1.38
PEX28YHR150W PAU1P0CE88 120 aa6.44□□□□□ -1.38
PEX28YHR150W PAU14P0CE89 120 aa6.44□□□□□ -1.38
PEX28YHR150W PAU6P0CE90 120 aa6.44□□□□□ -1.38
PEX28YHR150W PAU18P0CE91 120 aa6.44□□□□□ -1.38
PEX28YHR150W PAU8P0CE92 120 aa6.44□□□□□ -1.38
PEX28YHR150W PAU11P0CE93 120 aa6.44□□□□□ -1.38
PEX28YHR150W SAG1P20840 650 aa6.44□□□□□ -1.38
PEX28YHR150W LSB5P25369 354 aa6.44□□□□□ -1.38
PEX28YHR150W AHT1P29589 182 aa6.44□□□□□ -1.38
PEX28YHR150W PRS2P38620 318 aaKnown RBP6.44□□□□□ -1.38
PEX28YHR150W PAU13P38725 120 aa6.44□□□□□ -1.38
PEX28YHR150W PDR17P53844 350 aa6.44□□□□□ -1.38
PEX28YHR150W PAU10Q03050 120 aa6.44□□□□□ -1.38
PEX28YHR150W YAP6Q03935 383 aa6.44□□□□□ -1.38
PEX28YHR150W YOL029CQ08187 201 aa6.44□□□□□ -1.38
PEX28YHR150W PAU20Q08322 120 aa6.44□□□□□ -1.38
PEX28YHR150W PAU9Q3E770 120 aa6.44□□□□□ -1.38
PEX28YHR150W MAK32P23060 363 aa6.43□□□□□ -1.38
PEX28YHR150W MCH2P36032 473 aa6.43□□□□□ -1.38
PEX28YHR150W PTC7P38797 343 aa6.43□□□□□ -1.38
PEX28YHR150W RTC3P38804 111 aaPredicted RBP6.43□□□□□ -1.38
PEX28YHR150W LSM4P40070 187 aaKnown RBP6.43□□□□□ -1.38
PEX28YHR150W CCS1P40202 249 aaKnown RBP6.43□□□□□ -1.38
PEX28YHR150W MED7Q08278 222 aa6.43□□□□□ -1.38
PEX28YHR150W YPL264CQ08980 353 aa6.43□□□□□ -1.38
PEX28YHR150W SWT1Q12104 458 aa6.43□□□□□ -1.38
PEX28YHR150W YBR255C-AQ3E776 120 aa6.43□□□□□ -1.38
PEX28YHR150W MSI1P13712 422 aa6.42□□□□□ -1.38
PEX28YHR150W SAP30P38429 201 aa6.42□□□□□ -1.38
PEX28YHR150W ERV14P53173 138 aa6.42□□□□□ -1.38
PEX28YHR150W YNR040WP53736 256 aa6.42□□□□□ -1.38
PEX28YHR150W HED1Q03937 162 aa6.42□□□□□ -1.38
PEX28YHR150W YFH1Q07540 174 aa6.42□□□□□ -1.38
PEX28YHR150W RFU1Q08003 200 aa6.42□□□□□ -1.38
PEX28YHR150W ERV2Q12284 196 aa6.42□□□□□ -1.38
PEX28YHR150W MPD1Q12404 318 aaKnown RBP6.42□□□□□ -1.38
PEX28YHR150W RAX2Q12465 1220 aa6.42□□□□□ -1.38
PEX28YHR150W SEC62P21825 274 aa6.42□□□□□ -1.38
PEX28YHR150W YUH1P35127 236 aa6.42□□□□□ -1.38
PEX28YHR150W MRPL39P36533 70 aa6.42□□□□□ -1.38
PEX28YHR150W SEC24P40482 926 aaKnown RBP6.42□□□□□ -1.38
PEX28YHR150W YIL077CP40508 320 aa6.42□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms