RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W UGX2P32772 223 aa0.46□□□□□ -2.34
RPF1YHR088W BXI1P48558 297 aa0.46□□□□□ -2.34
RPF1YHR088W YGR050CP53231 118 aa0.46□□□□□ -2.34
RPF1YHR088W YDR274CP87283 123 aa0.46□□□□□ -2.34
RPF1YHR088W ATP15P21306 62 aa0.45□□□□□ -2.34
RPF1YHR088W SPO13P23624 291 aa0.45□□□□□ -2.34
RPF1YHR088W YPL073CP40323 161 aa0.45□□□□□ -2.34
RPF1YHR088W DAD4P69851 72 aa0.45□□□□□ -2.34
RPF1YHR088W MAG1P22134 296 aaKnown RBP0.44□□□□□ -2.34
RPF1YHR088W YCL042WP25572 119 aa0.44□□□□□ -2.34
RPF1YHR088W AST2P39945 430 aaKnown RBP0.44□□□□□ -2.34
RPF1YHR088W RMD6P39975 231 aa0.44□□□□□ -2.34
RPF1YHR088W YEL008WP40001 126 aa0.44□□□□□ -2.34
RPF1YHR088W COA3Q3E7B2 85 aa0.44□□□□□ -2.34
RPF1YHR088W ODC2Q99297 307 aa0.44□□□□□ -2.34
RPF1YHR088W IKI3Q06706 1349 aaKnown RBP0.43□□□□□ -2.34
RPF1YHR088W PTM1P32857 523 aa0.43□□□□□ -2.34
RPF1YHR088W PRX1P34227 261 aaKnown RBP0.43□□□□□ -2.34
RPF1YHR088W MPC3P53311 146 aa0.43□□□□□ -2.34
RPF1YHR088W YLR460CP54007 376 aa0.43□□□□□ -2.34
RPF1YHR088W YCR016WP25617 290 aaKnown RBP0.42□□□□□ -2.34
RPF1YHR088W UBC8P28263 218 aa0.42□□□□□ -2.34
RPF1YHR088W RPB7P34087 171 aa0.42□□□□□ -2.34
RPF1YHR088W MRPL15P36523 253 aa0.42□□□□□ -2.34
RPF1YHR088W AIM25P47140 327 aa0.42□□□□□ -2.34
RPF1YHR088W UBC12P52491 188 aa0.42□□□□□ -2.34
RPF1YHR088W PET117Q02771 107 aa0.42□□□□□ -2.34
RPF1YHR088W DIG2Q03373 323 aaKnown RBP0.42□□□□□ -2.34
RPF1YHR088W YDR391CQ04170 232 aa0.42□□□□□ -2.34
RPF1YHR088W YNG1Q08465 219 aa0.42□□□□□ -2.34
RPF1YHR088W YIL177CP40434 1758 aa0.42□□□□□ -2.34
RPF1YHR088W YJL225CP40889 1758 aa0.42□□□□□ -2.34
RPF1YHR088W PHO85P17157 305 aa0.41□□□□□ -2.34
RPF1YHR088W MGM101P32787 269 aaKnown RBP0.41□□□□□ -2.34
RPF1YHR088W YHL018WP38744 120 aaPredicted RBP0.41□□□□□ -2.34
RPF1YHR088W COG5P53951 403 aa0.41□□□□□ -2.34
RPF1YHR088W RRN5Q02983 363 aa0.41□□□□□ -2.34
RPF1YHR088W DGA1Q08650 418 aa0.41□□□□□ -2.34
RPF1YHR088W PRP8P33334 2413 aaKnown RBP0.4□□□□□ -2.34
RPF1YHR088W MATALPHA1P0CY06 175 aa0.4□□□□□ -2.35
RPF1YHR088W HMLALPHA1P0CY07 175 aa0.4□□□□□ -2.35
RPF1YHR088W CKS1P20486 150 aaKnown RBP0.4□□□□□ -2.35
RPF1YHR088W ALG13P53178 202 aa0.4□□□□□ -2.35
RPF1YHR088W PRP11Q07350 266 aaPredicted RBP0.4□□□□□ -2.35
RPF1YHR088W YPR203WQ08994 102 aa0.4□□□□□ -2.35
RPF1YHR088W YFR032C-BQ8TGU2 87 aa0.4□□□□□ -2.35
RPF1YHR088W CFT1Q06632 1357 aaKnown RBP0.4□□□□□ -2.35
RPF1YHR088W INO80P53115 1489 aa0.4□□□□□ -2.35
RPF1YHR088W OCH1P31755 480 aa0.39□□□□□ -2.35
RPF1YHR088W VMA6P32366 345 aaKnown RBP0.39□□□□□ -2.35
RPF1YHR088W MSN4P33749 630 aa0.39□□□□□ -2.35
RPF1YHR088W BNA7Q04066 261 aa0.39□□□□□ -2.35
RPF1YHR088W SEY1Q99287 776 aa0.39□□□□□ -2.35
RPF1YHR088W FMP49A0A023PZB3 126 aa0.38□□□□□ -2.35
RPF1YHR088W POR1P04840 283 aaKnown RBP0.38□□□□□ -2.35
RPF1YHR088W TVP23P38962 199 aa0.38□□□□□ -2.35
RPF1YHR088W LSM7P53905 115 aaKnown RBP0.38□□□□□ -2.35
RPF1YHR088W UPS3Q04006 179 aa0.38□□□□□ -2.35
RPF1YHR088W COX8P04039 78 aa0.37□□□□□ -2.35
RPF1YHR088W RHO1P06780 209 aaKnown RBP0.37□□□□□ -2.35
RPF1YHR088W GCN3P14741 305 aa0.37□□□□□ -2.35
RPF1YHR088W PAN3P36102 679 aaPredicted RBP0.37□□□□□ -2.35
RPF1YHR088W HNT1Q04344 158 aaKnown RBP0.37□□□□□ -2.35
RPF1YHR088W YHR214C-EQ8TGK0 99 aa0.37□□□□□ -2.35
RPF1YHR088W RPL28P02406 149 aaKnown RBP0.36□□□□□ -2.35
RPF1YHR088W RPL25P04456 142 aaKnown RBP0.36□□□□□ -2.35
RPF1YHR088W YMR31P19955 123 aa0.36□□□□□ -2.35
RPF1YHR088W RPL24BP24000 155 aaKnown RBP0.36□□□□□ -2.35
RPF1YHR088W YBR242WP38331 238 aa0.36□□□□□ -2.35
RPF1YHR088W HMF1P40037 129 aaKnown RBP0.36□□□□□ -2.35
RPF1YHR088W YRB1P41920 201 aaKnown RBP0.36□□□□□ -2.35
RPF1YHR088W MGA1P53050 456 aa0.36□□□□□ -2.35
RPF1YHR088W GET1P53192 235 aa0.36□□□□□ -2.35
RPF1YHR088W THG1P53215 237 aaKnown RBP0.36□□□□□ -2.35
RPF1YHR088W NOP19P53317 196 aaPredicted RBP0.36□□□□□ -2.35
RPF1YHR088W DYN3Q04949 312 aa0.36□□□□□ -2.35
RPF1YHR088W YMR226CQ05016 267 aaKnown RBP0.36□□□□□ -2.35
RPF1YHR088W RNH202Q05635 350 aa0.36□□□□□ -2.35
RPF1YHR088W FIT2Q08906 153 aa0.36□□□□□ -2.35
RPF1YHR088W FAS1P07149 2051 aaKnown RBP0.35□□□□□ -2.35
RPF1YHR088W SEN2P16658 377 aa0.35□□□□□ -2.35
RPF1YHR088W YIL102CP40488 101 aa0.35□□□□□ -2.35
RPF1YHR088W ERG10P41338 398 aaKnown RBP0.35□□□□□ -2.35
RPF1YHR088W ALB1P47019 175 aaPredicted RBP0.35□□□□□ -2.35
RPF1YHR088W IRC18P47056 224 aa0.35□□□□□ -2.35
RPF1YHR088W PDR17P53844 350 aa0.35□□□□□ -2.35
RPF1YHR088W PET191Q02772 108 aa0.35□□□□□ -2.35
RPF1YHR088W IRC23Q08416 157 aa0.35□□□□□ -2.35
RPF1YHR088W THP2O13539 261 aaKnown RBP0.34□□□□□ -2.36
RPF1YHR088W YCR090CP25654 182 aaKnown RBP0.34□□□□□ -2.36
RPF1YHR088W RTC3P38804 111 aaPredicted RBP0.34□□□□□ -2.36
RPF1YHR088W JLP1Q12358 412 aa0.34□□□□□ -2.36
RPF1YHR088W ARO7P32178 256 aa0.33□□□□□ -2.36
RPF1YHR088W SFK1P35735 353 aa0.33□□□□□ -2.36
RPF1YHR088W MIC12P38341 106 aa0.33□□□□□ -2.36
RPF1YHR088W YER085CP40058 173 aa0.33□□□□□ -2.36
RPF1YHR088W YER134CP40081 178 aa0.33□□□□□ -2.36
RPF1YHR088W CCW12Q12127 133 aa0.33□□□□□ -2.36
RPF1YHR088W YKL183C-AQ3E765 70 aa0.33□□□□□ -2.36
RPF1YHR088W YBR121C-AP0C5L4 52 aa0.32□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms