RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W PGA1P53896 198 aa3.66□□□□□ -1.82
UBC6YER100W TRM12Q04235 462 aa3.66□□□□□ -1.82
UBC6YER100W YDR114CQ04597 100 aa3.66□□□□□ -1.82
UBC6YER100W BRX1Q08235 291 aaKnown RBP3.66□□□□□ -1.82
UBC6YER100W AKR2Q12013 749 aa3.66□□□□□ -1.82
UBC6YER100W MPD1Q12404 318 aaKnown RBP3.66□□□□□ -1.82
UBC6YER100W RPS23AP0CX29 145 aaKnown RBP3.65□□□□□ -1.83
UBC6YER100W RPS23BP0CX30 145 aa3.65□□□□□ -1.83
UBC6YER100W ACP1P32463 125 aa3.65□□□□□ -1.83
UBC6YER100W TVP38P36164 337 aa3.65□□□□□ -1.83
UBC6YER100W SMD3P43321 101 aaKnown RBP3.65□□□□□ -1.83
UBC6YER100W COS6P53344 381 aa3.65□□□□□ -1.83
UBC6YER100W RRP17Q04031 235 aaPredicted RBP3.65□□□□□ -1.83
UBC6YER100W GPI17Q04080 534 aa3.65□□□□□ -1.83
UBC6YER100W PEX11Q12462 236 aa3.65□□□□□ -1.83
UBC6YER100W CKS1P20486 150 aaKnown RBP3.64□□□□□ -1.83
UBC6YER100W TDA4P47153 279 aa3.64□□□□□ -1.83
UBC6YER100W HNT1Q04344 158 aaKnown RBP3.64□□□□□ -1.83
UBC6YER100W FEX1Q08913 375 aa3.64□□□□□ -1.83
UBC6YER100W FEX2Q08991 375 aa3.64□□□□□ -1.83
UBC6YER100W MHT1Q12525 324 aa3.64□□□□□ -1.83
UBC6YER100W TSC3Q3E790 80 aa3.64□□□□□ -1.83
UBC6YER100W YPR014CQ6B0W2 109 aa3.64□□□□□ -1.83
UBC6YER100W RSA4P25382 515 aaKnown RBP3.63□□□□□ -1.83
UBC6YER100W YKR032WP36127 104 aa3.63□□□□□ -1.83
UBC6YER100W YFH7P43591 353 aa3.63□□□□□ -1.83
UBC6YER100W LSM1P47017 172 aaKnown RBP3.63□□□□□ -1.83
UBC6YER100W YGL235WP53071 178 aa3.63□□□□□ -1.83
UBC6YER100W CAB4P53332 305 aa3.63□□□□□ -1.83
UBC6YER100W DYN3Q04949 312 aa3.63□□□□□ -1.83
UBC6YER100W OCH1P31755 480 aa3.62□□□□□ -1.83
UBC6YER100W SCM4P32564 187 aa3.62□□□□□ -1.83
UBC6YER100W AGA2P32781 87 aa3.62□□□□□ -1.83
UBC6YER100W YKL102CP34249 101 aa3.62□□□□□ -1.83
UBC6YER100W SRP102P36057 244 aaPredicted RBP3.62□□□□□ -1.83
UBC6YER100W SNX4P47057 423 aa3.62□□□□□ -1.83
UBC6YER100W HSK3P69852 69 aa3.62□□□□□ -1.83
UBC6YER100W ARR2Q06597 130 aa3.62□□□□□ -1.83
UBC6YER100W DGA1Q08650 418 aa3.62□□□□□ -1.83
UBC6YER100W EFG1Q3E705 233 aaKnown RBP3.62□□□□□ -1.83
UBC6YER100W PET20Q99373 253 aa3.62□□□□□ -1.83
UBC6YER100W ATP15P21306 62 aa3.61□□□□□ -1.83
UBC6YER100W AIM2P39721 246 aa3.61□□□□□ -1.83
UBC6YER100W PIR5P46999 287 aa3.61□□□□□ -1.83
UBC6YER100W YJR111CP47148 283 aaKnown RBP3.61□□□□□ -1.83
UBC6YER100W DSK2P48510 373 aa3.61□□□□□ -1.83
UBC6YER100W YGL088WP53151 121 aa3.61□□□□□ -1.83
UBC6YER100W MAK3Q03503 176 aa3.61□□□□□ -1.83
UBC6YER100W IES4Q08561 116 aa3.61□□□□□ -1.83
UBC6YER100W TIM9O74700 87 aa3.6□□□□□ -1.83
UBC6YER100W RPS28BP0C0X0 67 aaKnown RBP3.6□□□□□ -1.83
UBC6YER100W YHR032W-AP0C5N6 59 aa3.6□□□□□ -1.83
UBC6YER100W SCO1P23833 295 aa3.6□□□□□ -1.83
UBC6YER100W VMA11P32842 164 aa3.6□□□□□ -1.83
UBC6YER100W MRPL17P36528 281 aa3.6□□□□□ -1.83
UBC6YER100W YER084WP40057 128 aa3.6□□□□□ -1.83
UBC6YER100W PRM10P42946 383 aa3.6□□□□□ -1.83
UBC6YER100W MOG1P47123 218 aa3.6□□□□□ -1.83
UBC6YER100W SBH2P52871 88 aa3.6□□□□□ -1.83
UBC6YER100W RPS28AQ3E7X9 67 aaPredicted RBP3.6□□□□□ -1.83
UBC6YER100W MSW1P04803 379 aa3.59□□□□□ -1.83
UBC6YER100W RPL26AP05743 127 aaKnown RBP3.59□□□□□ -1.83
UBC6YER100W YHL026CP38740 315 aa3.59□□□□□ -1.83
UBC6YER100W SER2P42941 309 aa3.59□□□□□ -1.83
UBC6YER100W AIF1P52923 378 aa3.59□□□□□ -1.83
UBC6YER100W RPL26BP53221 127 aaKnown RBP3.59□□□□□ -1.83
UBC6YER100W YDC1Q02896 317 aa3.59□□□□□ -1.83
UBC6YER100W SPO13P23624 291 aa3.58□□□□□ -1.84
UBC6YER100W NQM1P53228 333 aaPredicted RBP3.58□□□□□ -1.84
UBC6YER100W TMA20P89886 181 aaPredicted RBP3.58□□□□□ -1.84
UBC6YER100W ODC2Q99297 307 aa3.58□□□□□ -1.84
UBC6YER100W MDH3P32419 343 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
UBC6YER100W YEA4P40004 342 aa3.57□□□□□ -1.84
UBC6YER100W GVP36P40531 326 aaKnown RBP3.57□□□□□ -1.84
UBC6YER100W XPT1P47165 209 aa3.57□□□□□ -1.84
UBC6YER100W NEJ1Q06148 342 aa3.57□□□□□ -1.84
UBC6YER100W YDL180WQ12301 547 aa3.57□□□□□ -1.84
UBC6YER100W YLR412C-AQ3E742 68 aa3.57□□□□□ -1.84
UBC6YER100W KRE1P17260 313 aa3.56□□□□□ -1.84
UBC6YER100W OPY1P38271 328 aa3.56□□□□□ -1.84
UBC6YER100W UMP1P38293 148 aa3.56□□□□□ -1.84
UBC6YER100W YER134CP40081 178 aa3.56□□□□□ -1.84
UBC6YER100W RFC2P40348 353 aa3.56□□□□□ -1.84
UBC6YER100W MNN5P46982 586 aa3.56□□□□□ -1.84
UBC6YER100W MPA43P53583 542 aaPredicted RBP3.56□□□□□ -1.84
UBC6YER100W YPR127WQ06494 345 aa3.56□□□□□ -1.84
UBC6YER100W YCR023CP25351 611 aa3.55□□□□□ -1.84
UBC6YER100W UBC8P28263 218 aa3.55□□□□□ -1.84
UBC6YER100W FMT1P32785 401 aa3.55□□□□□ -1.84
UBC6YER100W SNC2P33328 115 aa3.55□□□□□ -1.84
UBC6YER100W NSG1P38837 291 aa3.55□□□□□ -1.84
UBC6YER100W PGD1P40356 397 aa3.55□□□□□ -1.84
UBC6YER100W YOR342CQ12182 319 aa3.55□□□□□ -1.84
UBC6YER100W CPA1P07258 411 aaKnown RBP3.54□□□□□ -1.84
UBC6YER100W YHR180WP38868 163 aa3.54□□□□□ -1.84
UBC6YER100W AVT2P39981 480 aa3.54□□□□□ -1.84
UBC6YER100W DOC1P53068 250 aa3.54□□□□□ -1.84
UBC6YER100W GIS2P53849 153 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
UBC6YER100W YPR195CQ06594 109 aa3.54□□□□□ -1.84
UBC6YER100W YLR046CQ12253 270 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms