RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS60, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS60YDR486C HRD1Q08109 551 aa8.9□□□□□ -0.98
VPS60YDR486C ISN1Q99312 450 aa8.9□□□□□ -0.98
VPS60YDR486C YIF1P53845 314 aaKnown RBP8.89□□□□□ -0.99
VPS60YDR486C DID2P69771 204 aa8.89□□□□□ -0.99
VPS60YDR486C LPP1Q04396 274 aa8.89□□□□□ -0.99
VPS60YDR486C ATG5Q12380 294 aa8.89□□□□□ -0.99
VPS60YDR486C GEP5Q12393 293 aa8.89□□□□□ -0.99
VPS60YDR486C YBR255C-AQ3E776 120 aa8.89□□□□□ -0.99
VPS60YDR486C RFC2P40348 353 aa8.88□□□□□ -0.99
VPS60YDR486C YJL118WP47022 219 aa8.88□□□□□ -0.99
VPS60YDR486C SUT1P53032 299 aaKnown RBP8.88□□□□□ -0.99
VPS60YDR486C YGL114WP53134 725 aa8.88□□□□□ -0.99
VPS60YDR486C PKP2P53170 491 aa8.88□□□□□ -0.99
VPS60YDR486C MSO1P53604 210 aaKnown RBP8.88□□□□□ -0.99
VPS60YDR486C YPD1Q07688 167 aa8.88□□□□□ -0.99
VPS60YDR486C YOS1Q3E834 85 aa8.88□□□□□ -0.99
VPS60YDR486C YMR31P19955 123 aa8.87□□□□□ -0.99
VPS60YDR486C TCA17P32613 152 aa8.87□□□□□ -0.99
VPS60YDR486C ADH5P38113 351 aaKnown RBP8.87□□□□□ -0.99
VPS60YDR486C YEA6P39953 335 aa8.87□□□□□ -0.99
VPS60YDR486C GZF3P42944 551 aaKnown RBP8.87□□□□□ -0.99
VPS60YDR486C AGX1P43567 385 aa8.87□□□□□ -0.99
VPS60YDR486C YGL117WP53133 265 aa8.87□□□□□ -0.99
VPS60YDR486C EST3Q03096 181 aa8.87□□□□□ -0.99
VPS60YDR486C HED1Q03937 162 aa8.87□□□□□ -0.99
VPS60YDR486C ERP1Q05359 219 aaKnown RBP8.87□□□□□ -0.99
VPS60YDR486C FMP16Q12497 93 aa8.87□□□□□ -0.99
VPS60YDR486C RPL9AP05738 191 aaKnown RBP8.86□□□□□ -0.99
VPS60YDR486C SPS18P32572 300 aa8.86□□□□□ -0.99
VPS60YDR486C YKL162CP36052 402 aa8.86□□□□□ -0.99
VPS60YDR486C LSM12P38828 187 aaKnown RBP8.86□□□□□ -0.99
VPS60YDR486C YHR138CP38841 114 aaPredicted RBP8.86□□□□□ -0.99
VPS60YDR486C SNX4P47057 423 aa8.86□□□□□ -0.99
VPS60YDR486C ARR2Q06597 130 aa8.86□□□□□ -0.99
VPS60YDR486C EMP24P32803 203 aaKnown RBP8.85□□□□□ -0.99
VPS60YDR486C SRY1P36007 326 aa8.85□□□□□ -0.99
VPS60YDR486C CBT1P36038 271 aaPredicted RBP8.85□□□□□ -0.99
VPS60YDR486C AIR1P40507 360 aaKnown RBP8.85□□□□□ -0.99
VPS60YDR486C RPL9BP51401 191 aaKnown RBP8.85□□□□□ -0.99
VPS60YDR486C BER1Q06688 274 aaKnown RBP8.85□□□□□ -0.99
VPS60YDR486C AIM45Q12480 344 aaKnown RBP8.85□□□□□ -0.99
VPS60YDR486C COA2Q3E823 68 aa8.85□□□□□ -0.99
VPS60YDR486C VPS63O13549 108 aa8.84□□□□□ -0.99
VPS60YDR486C ERV1P27882 189 aa8.84□□□□□ -0.99
VPS60YDR486C VMA11P32842 164 aa8.84□□□□□ -0.99
VPS60YDR486C ASP1P38986 381 aaPredicted RBP8.84□□□□□ -0.99
VPS60YDR486C GCV3P39726 170 aaPredicted RBP8.84□□□□□ -0.99
VPS60YDR486C ARP3P47117 449 aaKnown RBP8.84□□□□□ -0.99
VPS60YDR486C ABM1P47146 123 aa8.84□□□□□ -0.99
VPS60YDR486C HOF1Q05080 669 aa8.84□□□□□ -0.99
VPS60YDR486C AEP3Q12089 606 aa8.84□□□□□ -0.99
VPS60YDR486C DBP2P24783 546 aaKnown RBP8.83□□□□□ -1
VPS60YDR486C RPD3P32561 433 aa8.83□□□□□ -1
VPS60YDR486C PMU1P36069 295 aa8.83□□□□□ -1
VPS60YDR486C VMA7P39111 118 aa8.83□□□□□ -1
VPS60YDR486C SIT1P39980 628 aa8.83□□□□□ -1
VPS60YDR486C SYG1P40528 902 aa8.83□□□□□ -1
VPS60YDR486C APJ1P53940 528 aa8.83□□□□□ -1
VPS60YDR486C MIX17Q03667 156 aa8.83□□□□□ -1
VPS60YDR486C FSH2Q05015 223 aa8.83□□□□□ -1
VPS60YDR486C YPR071WQ12346 211 aa8.83□□□□□ -1
VPS60YDR486C ATG31Q12421 196 aa8.83□□□□□ -1
VPS60YDR486C SLM6P38343 150 aa8.82□□□□□ -1
VPS60YDR486C YGR045CP53229 120 aa8.82□□□□□ -1
VPS60YDR486C YMR090WQ04304 227 aaKnown RBP8.82□□□□□ -1
VPS60YDR486C ADH6Q04894 360 aaKnown RBP8.82□□□□□ -1
VPS60YDR486C FCF2Q12035 217 aaPredicted RBP8.82□□□□□ -1
VPS60YDR486C YCL042WP25572 119 aa8.81□□□□□ -1
VPS60YDR486C YGR050CP53231 118 aa8.81□□□□□ -1
VPS60YDR486C TIM44Q01852 431 aa8.81□□□□□ -1
VPS60YDR486C YMR082CQ04276 118 aa8.81□□□□□ -1
VPS60YDR486C YPL264CQ08980 353 aa8.81□□□□□ -1
VPS60YDR486C YBR085C-AO43137 85 aa8.8□□□□□ -1
VPS60YDR486C UBI4P0CG63 381 aaKnown RBP8.8□□□□□ -1
VPS60YDR486C SRB7P47822 140 aa8.8□□□□□ -1
VPS60YDR486C BUL1P48524 976 aa8.8□□□□□ -1
VPS60YDR486C CRH1P53301 507 aa8.8□□□□□ -1
VPS60YDR486C ATO3Q12359 275 aa8.8□□□□□ -1
VPS60YDR486C URA2P07259 2214 aaKnown RBP8.79□□□□□ -1
VPS60YDR486C ECM31P38122 312 aa8.79□□□□□ -1
VPS60YDR486C YEA4P40004 342 aa8.79□□□□□ -1
VPS60YDR486C YJR056CP47115 236 aa8.79□□□□□ -1
VPS60YDR486C YNL234WP53857 426 aa8.79□□□□□ -1
VPS60YDR486C STD1Q02794 444 aa8.79□□□□□ -1
VPS60YDR486C HBN1Q96VH4 193 aa8.79□□□□□ -1
VPS60YDR486C URA5P13298 226 aaKnown RBP8.78□□□□□ -1
VPS60YDR486C BGL2P15703 313 aaKnown RBP8.78□□□□□ -1
VPS60YDR486C ATP3P38077 311 aaKnown RBP8.78□□□□□ -1
VPS60YDR486C LSM4P40070 187 aaKnown RBP8.78□□□□□ -1
VPS60YDR486C DFG10P40526 253 aa8.78□□□□□ -1
VPS60YDR486C PDR17P53844 350 aa8.78□□□□□ -1
VPS60YDR486C YMR317WQ04893 1140 aa8.78□□□□□ -1
VPS60YDR486C YHR213W-AQ8TGT4 77 aa8.78□□□□□ -1
VPS60YDR486C ADE8P04161 214 aa8.77□□□□□ -1.01
VPS60YDR486C HEM13P11353 328 aaKnown RBP8.77□□□□□ -1.01
VPS60YDR486C YCR025CP25352 136 aa8.77□□□□□ -1.01
VPS60YDR486C UBC12P52491 188 aa8.77□□□□□ -1.01
VPS60YDR486C HCH1P53834 153 aa8.77□□□□□ -1.01
VPS60YDR486C TMA10Q06177 86 aa8.77□□□□□ -1.01
VPS60YDR486C FCY1Q12178 158 aa8.77□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 66.7 ms