RNA–Protein interactions for RNA: YDR400W

URH1, Transcript of Uridine nucleosidase (uridine-cytidine N-ribohydrolase), yeast

Gene URH1, Length 1,023 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URH1	YDR400W	YTH1	Q06102	208 aa	Predicted RBP	5.9	□□□□□ -1.46
URH1	YDR400W	FEX1	Q08913	375 aa		5.9	□□□□□ -1.46
URH1	YDR400W	PET20	Q99373	253 aa		5.9	□□□□□ -1.46
URH1	YDR400W	COX5B	P00425	151 aa		5.89	□□□□□ -1.47
URH1	YDR400W	MDH2	P22133	377 aa		5.89	□□□□□ -1.47
URH1	YDR400W	IFM1	P25038	676 aa		5.89	□□□□□ -1.47
URH1	YDR400W	VAM7	P32912	316 aa		5.89	□□□□□ -1.47
URH1	YDR400W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	5.89	□□□□□ -1.47	not detected
URH1	YDR400W	MTC6	P38849	526 aa		5.89	□□□□□ -1.47
URH1	YDR400W	YMR144W	P40214	342 aa	Known RBP	5.89	□□□□□ -1.47
URH1	YDR400W	NCA3	P46955	337 aa		5.89	□□□□□ -1.47
URH1	YDR400W	NIF3	P53081	288 aa		5.89	□□□□□ -1.47
URH1	YDR400W	SDC1	Q03323	175 aa		5.89	□□□□□ -1.47
URH1	YDR400W	YML108W	Q03759	105 aa		5.89	□□□□□ -1.47
URH1	YDR400W	ANT1	Q06497	328 aa		5.89	□□□□□ -1.47
URH1	YDR400W	YLR108C	Q12259	485 aa		5.89	□□□□□ -1.47
URH1	YDR400W	SEC16	P48415	2195 aa	Known RBP	5.89	□□□□□ -1.47
URH1	YDR400W	CDC36	P06100	191 aa	Predicted RBP	5.88	□□□□□ -1.47
URH1	YDR400W	MAG1	P22134	296 aa	Known RBP	5.88	□□□□□ -1.47
URH1	YDR400W	PAN3	P36102	679 aa	Predicted RBP	5.88	□□□□□ -1.47
URH1	YDR400W	SIM1	P40472	476 aa		5.88	□□□□□ -1.47
URH1	YDR400W	BMT5	P40493	336 aa		5.88	□□□□□ -1.47
URH1	YDR400W	YIP5	P53108	310 aa		5.88	□□□□□ -1.47
URH1	YDR400W	YGL159W	P53110	370 aa		5.88	□□□□□ -1.47
URH1	YDR400W	GIM3	P53900	129 aa		5.88	□□□□□ -1.47
URH1	YDR400W	TFC7	Q12415	435 aa		5.88	□□□□□ -1.47
URH1	YDR400W	TOR2	P32600	2474 aa	Known RBP	5.88	□□□□□ -1.47
URH1	YDR400W	NAM2	P11325	894 aa		5.87	□□□□□ -1.47
URH1	YDR400W	GLR1	P41921	483 aa	Known RBP	5.87	□□□□□ -1.47
URH1	YDR400W	WWM1	P43582	211 aa	Known RBP	5.87	□□□□□ -1.47
URH1	YDR400W	ECO1	P43605	281 aa		5.87	□□□□□ -1.47
URH1	YDR400W	YJR111C	P47148	283 aa	Known RBP	5.87	□□□□□ -1.47
URH1	YDR400W	NRK1	P53915	240 aa		5.87	□□□□□ -1.47
URH1	YDR400W	EOS1	P53938	366 aa		5.87	□□□□□ -1.47
URH1	YDR400W	RNH203	Q12338	110 aa		5.87	□□□□□ -1.47
URH1	YDR400W	PRM4	Q12498	284 aa		5.87	□□□□□ -1.47
URH1	YDR400W	CDC39	P25655	2108 aa	Known RBP	5.86	□□□□□ -1.47
URH1	YDR400W	MIR1	P23641	311 aa	Known RBP	5.86	□□□□□ -1.47
URH1	YDR400W	CPR3	P25719	182 aa		5.86	□□□□□ -1.47
URH1	YDR400W	RFA3	P26755	122 aa	Known RBP	5.86	□□□□□ -1.47
URH1	YDR400W	POP8	P38208	133 aa		5.86	□□□□□ -1.47
URH1	YDR400W	WSS1	P38838	269 aa		5.86	□□□□□ -1.47
URH1	YDR400W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	5.86	□□□□□ -1.47	not detected
URH1	YDR400W	YHC3	P47040	408 aa		5.86	□□□□□ -1.47
URH1	YDR400W	NSA1	P53136	463 aa	Predicted RBP	5.86	□□□□□ -1.47
URH1	YDR400W	ALG9	P53868	555 aa	Known RBP	5.86	□□□□□ -1.47
URH1	YDR400W	YDR209C	Q03480	137 aa		5.86	□□□□□ -1.47
URH1	YDR400W	YML018C	Q03730	393 aa		5.86	□□□□□ -1.47
URH1	YDR400W	MIX14	Q04341	121 aa		5.86	□□□□□ -1.47
URH1	YDR400W	FEX2	Q08991	375 aa		5.86	□□□□□ -1.47
URH1	YDR400W	CDC28	P00546	298 aa	Known RBP	5.85	□□□□□ -1.47
URH1	YDR400W	TPI1	P00942	248 aa	Known RBP	5.85	□□□□□ -1.47
URH1	YDR400W	RPL30	P14120	105 aa	Known RBP	5.85	□□□□□ -1.47
URH1	YDR400W	FUS3	P16892	353 aa	Known RBP	5.85	□□□□□ -1.47
URH1	YDR400W	MRPL4	P36517	319 aa		5.85	□□□□□ -1.47
URH1	YDR400W	MOB2	P43563	287 aa		5.85	□□□□□ -1.47
URH1	YDR400W	BOR1	P53838	576 aa		5.85	□□□□□ -1.47
URH1	YDR400W	EST3	Q03096	181 aa		5.85	□□□□□ -1.47
URH1	YDR400W	YDR248C	Q03786	193 aa		5.85	□□□□□ -1.47
URH1	YDR400W	TPT1	Q12272	230 aa	Known RBP	5.85	□□□□□ -1.47
URH1	YDR400W	EAF3	Q12432	401 aa		5.85	□□□□□ -1.47
URH1	YDR400W	REP2	P03872	296 aa		5.84	□□□□□ -1.47
URH1	YDR400W	RPS16A	P0CX51	143 aa	Known RBP	5.84	□□□□□ -1.47
URH1	YDR400W	RPS16B	P0CX52	143 aa	Known RBP	5.84	□□□□□ -1.47
URH1	YDR400W	CBT1	P36038	271 aa	Predicted RBP	5.84	□□□□□ -1.47
URH1	YDR400W	ADH5	P38113	351 aa	Known RBP	5.84	□□□□□ -1.47
URH1	YDR400W	YBR096W	P38256	230 aa		5.84	□□□□□ -1.47
URH1	YDR400W	ASP1	P38986	381 aa	Predicted RBP	5.84	□□□□□ -1.47
URH1	YDR400W	GCV3	P39726	170 aa	Predicted RBP	5.84	□□□□□ -1.47
URH1	YDR400W	SSO2	P39926	295 aa		5.84	□□□□□ -1.47
URH1	YDR400W	PRM5	P40476	318 aa		5.84	□□□□□ -1.47
URH1	YDR400W	ADO1	P47143	340 aa	Known RBP	5.84	□□□□□ -1.47
URH1	YDR400W	NOC4	Q06512	552 aa	Predicted RBP	5.84	□□□□□ -1.47
URH1	YDR400W	MRX9	Q07349	420 aa	Known RBP	5.84	□□□□□ -1.47
URH1	YDR400W	SCP1	Q08873	200 aa		5.84	□□□□□ -1.47
URH1	YDR400W	TFB5	Q3E7C1	72 aa	Predicted RBP	5.84	□□□□□ -1.47
URH1	YDR400W	YHR213W-A	Q8TGT4	77 aa		5.84	□□□□□ -1.47
URH1	YDR400W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	5.83	□□□□□ -1.48	not detected
URH1	YDR400W	QCR2	P07257	368 aa		5.83	□□□□□ -1.48
URH1	YDR400W	PEX4	P29340	183 aa		5.83	□□□□□ -1.48
URH1	YDR400W	ATP3	P38077	311 aa	Known RBP	5.83	□□□□□ -1.48
URH1	YDR400W	DIG2	Q03373	323 aa	Known RBP	5.83	□□□□□ -1.48
URH1	YDR400W	THI74	Q04083	370 aa		5.83	□□□□□ -1.48
URH1	YDR400W	PBA1	Q05778	276 aa		5.83	□□□□□ -1.48
URH1	YDR400W	TRP1	P00912	224 aa		5.82	□□□□□ -1.48
URH1	YDR400W	YFR010W-A	P0C5N0	62 aa		5.82	□□□□□ -1.48
URH1	YDR400W	CNB1	P25296	175 aa		5.82	□□□□□ -1.48
URH1	YDR400W	PDC2	P32896	925 aa		5.82	□□□□□ -1.48
URH1	YDR400W	LSM12	P38828	187 aa	Known RBP	5.82	□□□□□ -1.48
URH1	YDR400W	POP2	P39008	433 aa		5.82	□□□□□ -1.48
URH1	YDR400W	YIR035C	P40579	254 aa		5.82	□□□□□ -1.48
URH1	YDR400W	UFD1	P53044	361 aa		5.82	□□□□□ -1.48
URH1	YDR400W	PNC1	P53184	216 aa	Known RBP	5.82	□□□□□ -1.48
URH1	YDR400W	USB1	Q12208	290 aa	Known RBP	5.82	□□□□□ -1.48
URH1	YDR400W	ERV2	Q12284	196 aa		5.82	□□□□□ -1.48
URH1	YDR400W	HUT1	Q12520	339 aa		5.82	□□□□□ -1.48
URH1	YDR400W	UBA3	Q99344	299 aa		5.82	□□□□□ -1.48
URH1	YDR400W	SEN1	Q00416	2231 aa	Known RBP	5.81	□□□□□ -1.48
URH1	YDR400W	CYC3	P06182	269 aa		5.81	□□□□□ -1.48
URH1	YDR400W	CBP6	P07253	162 aa	Predicted RBP	5.81	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 84.8 ms