RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeastyeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE9YDR393W YEL073CP39974 107 aa1.08□□□□□ -2.24
SHE9YDR393W YEL028WP39989 153 aa1.08□□□□□ -2.24
SHE9YDR393W SMB1P40018 196 aaKnown RBP1.08□□□□□ -2.24
SHE9YDR393W YER135CP40082 130 aa1.08□□□□□ -2.24
SHE9YDR393W CUP9P41817 306 aa1.08□□□□□ -2.24
SHE9YDR393W YAR1P46683 200 aa1.08□□□□□ -2.24
SHE9YDR393W RPC17P47076 161 aa1.08□□□□□ -2.24
SHE9YDR393W GTR2P53290 341 aa1.08□□□□□ -2.24
SHE9YDR393W SNZ2P53824 298 aa1.08□□□□□ -2.24
SHE9YDR393W RHO3Q00245 231 aaKnown RBP1.08□□□□□ -2.24
SHE9YDR393W SPG4Q04438 115 aa1.08□□□□□ -2.24
SHE9YDR393W COX20Q04935 205 aa1.08□□□□□ -2.24
SHE9YDR393W RRS1Q08746 203 aaKnown RBP1.08□□□□□ -2.24
SHE9YDR393W MDM32Q12171 622 aa1.08□□□□□ -2.24
SHE9YDR393W OCA6Q12454 224 aa1.08□□□□□ -2.24
SHE9YDR393W CCW14O13547 238 aa1.07□□□□□ -2.24
SHE9YDR393W HOM6P31116 359 aaKnown RBP1.07□□□□□ -2.24
SHE9YDR393W OAC1P32332 324 aa1.07□□□□□ -2.24
SHE9YDR393W YKE4P40544 346 aa1.07□□□□□ -2.24
SHE9YDR393W USE1P53146 245 aa1.07□□□□□ -2.24
SHE9YDR393W MSA1Q08471 629 aa1.07□□□□□ -2.24
SHE9YDR393W YOR186WQ08560 144 aa1.07□□□□□ -2.24
SHE9YDR393W BTS1Q12051 335 aa1.07□□□□□ -2.24
SHE9YDR393W YOL107WQ12239 342 aa1.07□□□□□ -2.24
SHE9YDR393W SNU23Q12368 194 aaPredicted RBP1.07□□□□□ -2.24
SHE9YDR393W Q0297Q9ZZV8 51 aa1.07□□□□□ -2.24
SHE9YDR393W MSW1P04803 379 aa1.06□□□□□ -2.24
SHE9YDR393W CPA1P07258 411 aaKnown RBP1.06□□□□□ -2.24
SHE9YDR393W RNA15P25299 296 aaPredicted RBP1.06□□□□□ -2.24
SHE9YDR393W RPS27AP35997 82 aaKnown RBP1.06□□□□□ -2.24
SHE9YDR393W YKR045CP36138 183 aa1.06□□□□□ -2.24
SHE9YDR393W RPS27BP38711 82 aa1.06□□□□□ -2.24
SHE9YDR393W GOS1P38736 223 aa1.06□□□□□ -2.24
SHE9YDR393W CTR2P38865 189 aa1.06□□□□□ -2.24
SHE9YDR393W MEP1P40260 492 aa1.06□□□□□ -2.24
SHE9YDR393W BUD25P85052 153 aa1.06□□□□□ -2.24
SHE9YDR393W KAP95Q06142 861 aaKnown RBP1.06□□□□□ -2.24
SHE9YDR393W YPR172WQ06608 200 aa1.06□□□□□ -2.24
SHE9YDR393W USB1Q12208 290 aaKnown RBP1.06□□□□□ -2.24
SHE9YDR393W HTL1Q9URQ5 78 aa1.06□□□□□ -2.24
SHE9YDR393W UBR1P19812 1950 aa1.05□□□□□ -2.24
SHE9YDR393W DDI2P0CH63 225 aa1.05□□□□□ -2.24
SHE9YDR393W DDI3P0CH64 225 aa1.05□□□□□ -2.24
SHE9YDR393W EHD3P28817 500 aa1.05□□□□□ -2.24
SHE9YDR393W PRP18P33411 251 aaPredicted RBP1.05□□□□□ -2.24
SHE9YDR393W GIM4P40005 111 aaKnown RBP1.05□□□□□ -2.24
SHE9YDR393W YIL001WP40560 513 aa1.05□□□□□ -2.24
SHE9YDR393W HOP2P53187 214 aa1.05□□□□□ -2.24
SHE9YDR393W MPP6P53725 186 aaPredicted RBP1.05□□□□□ -2.24
SHE9YDR393W NEJ1Q06148 342 aa1.05□□□□□ -2.24
SHE9YDR393W ATG39Q06159 398 aa1.05□□□□□ -2.24
SHE9YDR393W YCT1Q12235 531 aa1.05□□□□□ -2.24
SHE9YDR393W SEY1Q99287 776 aa1.05□□□□□ -2.24
SHE9YDR393W CDC33P07260 213 aaKnown RBP1.04□□□□□ -2.24
SHE9YDR393W MGM101P32787 269 aaKnown RBP1.04□□□□□ -2.24
SHE9YDR393W YPT52P36018 234 aaKnown RBP1.04□□□□□ -2.24
SHE9YDR393W YBR096WP38256 230 aa1.04□□□□□ -2.24
SHE9YDR393W YBR219CP38317 127 aa1.04□□□□□ -2.24
SHE9YDR393W YNR062CP53748 327 aa1.04□□□□□ -2.24
SHE9YDR393W TRM12Q04235 462 aa1.04□□□□□ -2.24
SHE9YDR393W RNH1Q04740 348 aa1.04□□□□□ -2.24
SHE9YDR393W HEM25Q07534 307 aa1.04□□□□□ -2.24
SHE9YDR393W LDB18Q07887 179 aa1.04□□□□□ -2.24
SHE9YDR393W EFG1Q3E705 233 aaKnown RBP1.04□□□□□ -2.24
SHE9YDR393W YGL010WP25338 174 aa1.03□□□□□ -2.24
SHE9YDR393W BIG1P38813 335 aa1.03□□□□□ -2.24
SHE9YDR393W YHR127WP38833 243 aaKnown RBP1.03□□□□□ -2.24
SHE9YDR393W BFR1P38934 470 aaKnown RBP RIP-Chip data1.03□□□□□ -2.24not detected
SHE9YDR393W YAR068WP39564 161 aa1.03□□□□□ -2.24
SHE9YDR393W ILM1P47155 203 aa1.03□□□□□ -2.24
SHE9YDR393W YNL046WP53956 172 aa1.03□□□□□ -2.24
SHE9YDR393W GRX8Q05926 109 aa1.03□□□□□ -2.24
SHE9YDR393W ARR2Q06597 130 aa1.03□□□□□ -2.24
SHE9YDR393W SDO1Q07953 250 aaKnown RBP1.03□□□□□ -2.24
SHE9YDR393W CSM4Q08955 156 aa1.03□□□□□ -2.24
SHE9YDR393W YOR020W-AQ3E824 90 aa1.03□□□□□ -2.24
SHE9YDR393W MEI4P29467 408 aa1.02□□□□□ -2.25
SHE9YDR393W YKL102CP34249 101 aa1.02□□□□□ -2.25
SHE9YDR393W RTT105P40063 208 aa1.02□□□□□ -2.25
SHE9YDR393W AGE2P40529 298 aa1.02□□□□□ -2.25
SHE9YDR393W YJR056CP47115 236 aa1.02□□□□□ -2.25
SHE9YDR393W HAM1P47119 197 aaKnown RBP1.02□□□□□ -2.25
SHE9YDR393W GAS3Q03655 524 aa1.02□□□□□ -2.25
SHE9YDR393W YDR278CQ05612 105 aa1.02□□□□□ -2.25
SHE9YDR393W Q0144Q9ZZW2 109 aa1.02□□□□□ -2.25
SHE9YDR393W MDM35O60200 86 aa1.01□□□□□ -2.25
SHE9YDR393W FCY2P17064 533 aa1.01□□□□□ -2.25
SHE9YDR393W GRX2P17695 143 aaKnown RBP1.01□□□□□ -2.25
SHE9YDR393W STP22P25604 385 aa1.01□□□□□ -2.25
SHE9YDR393W PRX1P34227 261 aaKnown RBP1.01□□□□□ -2.25
SHE9YDR393W RPF1P38805 295 aaKnown RBP1.01□□□□□ -2.25
SHE9YDR393W YHR180WP38868 163 aa1.01□□□□□ -2.25
SHE9YDR393W SVP26P38869 228 aa1.01□□□□□ -2.25
SHE9YDR393W AIM18P38884 321 aa1.01□□□□□ -2.25
SHE9YDR393W YMR144WP40214 342 aaKnown RBP1.01□□□□□ -2.25
SHE9YDR393W YFL051CP43552 160 aa1.01□□□□□ -2.25
SHE9YDR393W MIX14Q04341 121 aa1.01□□□□□ -2.25
SHE9YDR393W SSQ1Q05931 657 aaPredicted RBP1.01□□□□□ -2.25
SHE9YDR393W CSI2Q08054 341 aa1.01□□□□□ -2.25
SHE9YDR393W YFR010W-AP0C5N0 62 aa1□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms