RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAL1	YDR348C	LST7	P53237	242 aa		4.37	□□□□□ -1.71
PAL1	YDR348C	SSU72	P53538	206 aa	Predicted RBP	4.37	□□□□□ -1.71
PAL1	YDR348C	RHO3	Q00245	231 aa	Known RBP	4.37	□□□□□ -1.71
PAL1	YDR348C	APS2	Q00381	147 aa		4.37	□□□□□ -1.71
PAL1	YDR348C	ROT1	Q03691	256 aa		4.37	□□□□□ -1.71
PAL1	YDR348C	ATG10	Q07879	167 aa		4.37	□□□□□ -1.71
PAL1	YDR348C	YLR030W	Q07967	263 aa		4.37	□□□□□ -1.71
PAL1	YDR348C	HRT1	Q08273	121 aa		4.37	□□□□□ -1.71
PAL1	YDR348C	ENB1	Q08299	606 aa		4.37	□□□□□ -1.71
PAL1	YDR348C	YDL157C	Q12082	118 aa		4.37	□□□□□ -1.71
PAL1	YDR348C	RDL1	Q12305	139 aa	Known RBP	4.37	□□□□□ -1.71
PAL1	YDR348C	UBA3	Q99344	299 aa		4.37	□□□□□ -1.71
PAL1	YDR348C	YMR084W	A2P2R3	262 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	GAS1	P22146	559 aa	Known RBP	4.36	□□□□□ -1.71
PAL1	YDR348C	SPO13	P23624	291 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	YGL010W	P25338	174 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	YCR025C	P25352	136 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	YKL187C	P34231	750 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	GCS1	P35197	352 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	PAU16	P35994	123 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	UMP1	P38293	148 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	OM14	P38325	134 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	TTI2	P47168	421 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	OGG1	P53397	376 aa	Predicted RBP	4.36	□□□□□ -1.71
PAL1	YDR348C	YMR178W	Q03219	274 aa	Known RBP	4.36	□□□□□ -1.71
PAL1	YDR348C	HRI1	Q05905	244 aa	Known RBP	4.36	□□□□□ -1.71
PAL1	YDR348C	STP3	Q05937	343 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	CSM4	Q08955	156 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	HUT1	Q12520	339 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	CCH1	P50077	2039 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	YLR358C	O13565	187 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	MES1	P00958	751 aa	Known RBP	4.36	□□□□□ -1.71
PAL1	YDR348C	NOP1	P15646	327 aa	Known RBP	4.36	□□□□□ -1.71
PAL1	YDR348C	STE18	P18852	110 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	FUB1	P25659	250 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	SSH4	P32343	579 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	SPC29	P33419	253 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	YKL102C	P34249	101 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	DAD2	P36162	133 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	FIG1	P38224	298 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	AME1	P38313	324 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	YER134C	P40081	178 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	DAD3	P69850	94 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	GIS1	Q03833	894 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	MRPL51	Q06090	140 aa	Predicted RBP	4.36	□□□□□ -1.71
PAL1	YDR348C	YPQ1	Q12010	308 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	PRR2	Q12310	699 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	SLO1	Q3E784	85 aa		4.36	□□□□□ -1.71
PAL1	YDR348C	URA5	P13298	226 aa	Known RBP	4.35	□□□□□ -1.71
PAL1	YDR348C	CTA1	P15202	515 aa		4.35	□□□□□ -1.71
PAL1	YDR348C	ARO2	P28777	376 aa	Known RBP	4.35	□□□□□ -1.71
PAL1	YDR348C	AHT1	P29589	182 aa		4.35	□□□□□ -1.71
PAL1	YDR348C	YKL071W	P36086	256 aa		4.35	□□□□□ -1.71
PAL1	YDR348C	PAC2	P39937	518 aa		4.35	□□□□□ -1.71
PAL1	YDR348C	YIL161W	P40449	235 aa	Known RBP	4.35	□□□□□ -1.71
PAL1	YDR348C	XBP1	P40489	647 aa		4.35	□□□□□ -1.71
PAL1	YDR348C	SMK1	P41808	388 aa		4.35	□□□□□ -1.71
PAL1	YDR348C	ERJ5	P43613	295 aa	Predicted RBP	4.35	□□□□□ -1.71
PAL1	YDR348C	YJL028W	P47062	111 aa		4.35	□□□□□ -1.71
PAL1	YDR348C	PMT3	P47190	753 aa		4.35	□□□□□ -1.71
PAL1	YDR348C	ERG25	P53045	309 aa		4.35	□□□□□ -1.71
PAL1	YDR348C	RNH201	P53942	307 aa		4.35	□□□□□ -1.71
PAL1	YDR348C	IZH1	Q03419	316 aa		4.35	□□□□□ -1.71
PAL1	YDR348C	GIM5	Q04493	163 aa		4.35	□□□□□ -1.71
PAL1	YDR348C	FMP49	A0A023PZB3	126 aa		4.34	□□□□□ -1.71
PAL1	YDR348C	MBF1	O14467	151 aa	Known RBP	4.34	□□□□□ -1.71
PAL1	YDR348C	RPP2A	P05319	106 aa	Known RBP	4.34	□□□□□ -1.71
PAL1	YDR348C	OPI3	P05375	206 aa		4.34	□□□□□ -1.71
PAL1	YDR348C	MDH2	P22133	377 aa		4.34	□□□□□ -1.71
PAL1	YDR348C	DAL80	P26343	269 aa		4.34	□□□□□ -1.71
PAL1	YDR348C	MNS1	P32906	549 aa		4.34	□□□□□ -1.71
PAL1	YDR348C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.34	□□□□□ -1.71	not detected
PAL1	YDR348C	YOR062C	P36025	268 aa		4.34	□□□□□ -1.71
PAL1	YDR348C	YBR220C	P38318	560 aa		4.34	□□□□□ -1.71
PAL1	YDR348C	ANS1	P38832	159 aa		4.34	□□□□□ -1.71
PAL1	YDR348C	RPB11	P38902	120 aa		4.34	□□□□□ -1.71
PAL1	YDR348C	MSO1	P53604	210 aa	Known RBP	4.34	□□□□□ -1.71
PAL1	YDR348C	DUG3	P53871	357 aa		4.34	□□□□□ -1.71
PAL1	YDR348C	RPL21A	Q02753	160 aa	Known RBP	4.34	□□□□□ -1.71
PAL1	YDR348C	PET191	Q02772	108 aa		4.34	□□□□□ -1.71
PAL1	YDR348C	YMR090W	Q04304	227 aa	Known RBP	4.34	□□□□□ -1.71
PAL1	YDR348C	YML096W	Q04489	525 aa		4.34	□□□□□ -1.71
PAL1	YDR348C	NAT3	Q06504	195 aa		4.34	□□□□□ -1.71
PAL1	YDR348C	YOL024W	Q08172	172 aa		4.34	□□□□□ -1.71
PAL1	YDR348C	NPC2	Q12408	173 aa		4.34	□□□□□ -1.71
PAL1	YDR348C	RPL21B	Q12672	160 aa	Known RBP	4.34	□□□□□ -1.71
PAL1	YDR348C	YLL053C	P0CD98	152 aa		4.33	□□□□□ -1.72
PAL1	YDR348C	PDE1	P22434	369 aa		4.33	□□□□□ -1.72
PAL1	YDR348C	SCO1	P23833	295 aa		4.33	□□□□□ -1.72
PAL1	YDR348C	ERG2	P32352	222 aa		4.33	□□□□□ -1.72
PAL1	YDR348C	MTR2	P34232	184 aa	Known RBP	4.33	□□□□□ -1.72
PAL1	YDR348C	LSM2	P38203	95 aa	Known RBP	4.33	□□□□□ -1.72
PAL1	YDR348C	TRM7	P38238	310 aa	Known RBP	4.33	□□□□□ -1.72
PAL1	YDR348C	ELO1	P39540	310 aa		4.33	□□□□□ -1.72
PAL1	YDR348C	ZIM17	P42844	174 aa		4.33	□□□□□ -1.72
PAL1	YDR348C	SNO3	P43544	222 aa		4.33	□□□□□ -1.72
PAL1	YDR348C	SNO2	P53823	222 aa		4.33	□□□□□ -1.72
PAL1	YDR348C	YMR166C	Q03829	368 aa		4.33	□□□□□ -1.72
PAL1	YDR348C	ADH6	Q04894	360 aa	Known RBP	4.33	□□□□□ -1.72
PAL1	YDR348C	CTS2	Q06350	511 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 47.6 ms