RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	SEC22	P22214	214 aa		4.06	□□□□□ -1.76
LCB2	YDR062W	BMH1	P29311	267 aa	Known RBP	4.06	□□□□□ -1.76
LCB2	YDR062W	SWD3	P38123	315 aa		4.06	□□□□□ -1.76
LCB2	YDR062W	DOG1	P38774	246 aa		4.06	□□□□□ -1.76
LCB2	YDR062W	NVJ1	P38881	321 aa		4.06	□□□□□ -1.76
LCB2	YDR062W	UFD1	P53044	361 aa		4.06	□□□□□ -1.76
LCB2	YDR062W	NQM1	P53228	333 aa	Predicted RBP	4.06	□□□□□ -1.76
LCB2	YDR062W	DID2	P69771	204 aa		4.06	□□□□□ -1.76
LCB2	YDR062W	SLD7	Q08457	257 aa		4.06	□□□□□ -1.76
LCB2	YDR062W	RDI1	Q12434	202 aa		4.06	□□□□□ -1.76
LCB2	YDR062W	PEX11	Q12462	236 aa		4.06	□□□□□ -1.76
LCB2	YDR062W	RPB9	P27999	122 aa		4.06	□□□□□ -1.76
LCB2	YDR062W	DOG2	P38773	246 aa		4.06	□□□□□ -1.76
LCB2	YDR062W	TEM1	P38987	245 aa		4.06	□□□□□ -1.76
LCB2	YDR062W	RMD6	P39975	231 aa		4.06	□□□□□ -1.76
LCB2	YDR062W	FLC3	P53121	802 aa		4.06	□□□□□ -1.76
LCB2	YDR062W	YMR230W-A	Q3E7B5	62 aa		4.06	□□□□□ -1.76
LCB2	YDR062W	YBL112C	Q3E7Y4	105 aa		4.06	□□□□□ -1.76
LCB2	YDR062W	HTL1	Q9URQ5	78 aa		4.06	□□□□□ -1.76
LCB2	YDR062W	SIR2	P06700	562 aa		4.05	□□□□□ -1.76
LCB2	YDR062W	MRPL27	P36526	146 aa	Predicted RBP	4.05	□□□□□ -1.76
LCB2	YDR062W	ECM34	P38728	170 aa		4.05	□□□□□ -1.76
LCB2	YDR062W	HMF1	P40037	129 aa	Known RBP	4.05	□□□□□ -1.76
LCB2	YDR062W	PGU1	P47180	361 aa		4.05	□□□□□ -1.76
LCB2	YDR062W	CAX4	P53223	239 aa		4.05	□□□□□ -1.76
LCB2	YDR062W	YGR050C	P53231	118 aa		4.05	□□□□□ -1.76
LCB2	YDR062W	OSH6	Q02201	448 aa		4.05	□□□□□ -1.76
LCB2	YDR062W	TVP15	Q03860	143 aa		4.05	□□□□□ -1.76
LCB2	YDR062W	YDL211C	Q12121	372 aa		4.05	□□□□□ -1.76
LCB2	YDR062W	SMT3	Q12306	101 aa	Known RBP	4.05	□□□□□ -1.76
LCB2	YDR062W	NOT5	Q12514	560 aa	Predicted RBP	4.05	□□□□□ -1.76
LCB2	YDR062W	CDC7	P06243	507 aa		4.04	□□□□□ -1.76
LCB2	YDR062W	SNF4	P12904	322 aa		4.04	□□□□□ -1.76
LCB2	YDR062W	NUF2	P33895	451 aa		4.04	□□□□□ -1.76
LCB2	YDR062W	PRM10	P42946	383 aa		4.04	□□□□□ -1.76
LCB2	YDR062W	FMP32	P43557	207 aa		4.04	□□□□□ -1.76
LCB2	YDR062W	COS6	P53344	381 aa		4.04	□□□□□ -1.76
LCB2	YDR062W	YMD8	Q03697	442 aa		4.04	□□□□□ -1.76
LCB2	YDR062W	DYN3	Q04949	312 aa		4.04	□□□□□ -1.76
LCB2	YDR062W	YPR127W	Q06494	345 aa		4.04	□□□□□ -1.76
LCB2	YDR062W	YOL019W	Q08157	551 aa		4.04	□□□□□ -1.76
LCB2	YDR062W	YPR117W	Q06116	2489 aa		4.04	□□□□□ -1.76
LCB2	YDR062W	YLR462W	O13556	202 aa		4.03	□□□□□ -1.76
LCB2	YDR062W	CMD1	P06787	147 aa	Known RBP	4.03	□□□□□ -1.76
LCB2	YDR062W	MAG1	P22134	296 aa	Known RBP	4.03	□□□□□ -1.76
LCB2	YDR062W	YCR090C	P25654	182 aa	Known RBP	4.03	□□□□□ -1.76
LCB2	YDR062W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
LCB2	YDR062W	YEL075C	P39972	122 aa		4.03	□□□□□ -1.76
LCB2	YDR062W	YGL260W	P53056	76 aa		4.03	□□□□□ -1.76
LCB2	YDR062W	YNL010W	P53981	241 aa	Known RBP	4.03	□□□□□ -1.76
LCB2	YDR062W	GRH1	Q04410	372 aa	Known RBP	4.03	□□□□□ -1.76
LCB2	YDR062W	SEC14	P24280	304 aa	Known RBP	4.03	□□□□□ -1.76
LCB2	YDR062W	ERG24	P32462	438 aa	Known RBP	4.03	□□□□□ -1.76
LCB2	YDR062W	SFC1	P33303	322 aa		4.03	□□□□□ -1.76
LCB2	YDR062W	MSA2	P36157	363 aa		4.03	□□□□□ -1.76
LCB2	YDR062W	TRR2	P38816	342 aa		4.03	□□□□□ -1.76
LCB2	YDR062W	GIM4	P40005	111 aa	Known RBP	4.03	□□□□□ -1.76
LCB2	YDR062W	HST4	P53688	370 aa		4.03	□□□□□ -1.76
LCB2	YDR062W	COG5	P53951	403 aa		4.03	□□□□□ -1.76
LCB2	YDR062W	MAK3	Q03503	176 aa		4.03	□□□□□ -1.76
LCB2	YDR062W	NIP7	Q08962	181 aa	Known RBP	4.03	□□□□□ -1.76
LCB2	YDR062W	PST1	Q12355	444 aa		4.03	□□□□□ -1.76
LCB2	YDR062W	YPL247C	Q12523	523 aa		4.03	□□□□□ -1.76
LCB2	YDR062W	YEL009C-A	A0A023PZF2	135 aa		4.02	□□□□□ -1.77
LCB2	YDR062W	PET54	P10834	293 aa		4.02	□□□□□ -1.77
LCB2	YDR062W	SUE1	Q06524	206 aa		4.02	□□□□□ -1.77
LCB2	YDR062W	YPL257W	Q08974	193 aa		4.02	□□□□□ -1.77
LCB2	YDR062W	YOR020W-A	Q3E824	90 aa		4.02	□□□□□ -1.77
LCB2	YDR062W	YOL085C	Q99345	113 aa		4.02	□□□□□ -1.77
LCB2	YDR062W	TAD3	Q9URQ3	322 aa		4.02	□□□□□ -1.77
LCB2	YDR062W	FCY2	P17064	533 aa		4.01	□□□□□ -1.77
LCB2	YDR062W	SCO1	P23833	295 aa		4.01	□□□□□ -1.77
LCB2	YDR062W	AHC2	P25649	128 aa		4.01	□□□□□ -1.77
LCB2	YDR062W	IRC22	P40006	225 aa		4.01	□□□□□ -1.77
LCB2	YDR062W	RSM25	P40496	264 aa		4.01	□□□□□ -1.77
LCB2	YDR062W	UFE1	P41834	346 aa		4.01	□□□□□ -1.77
LCB2	YDR062W	YPI1	P43587	155 aa		4.01	□□□□□ -1.77
LCB2	YDR062W	RPA43	P46669	326 aa		4.01	□□□□□ -1.77
LCB2	YDR062W	MOG1	P47123	218 aa		4.01	□□□□□ -1.77
LCB2	YDR062W	AIM34	Q03673	198 aa		4.01	□□□□□ -1.77
LCB2	YDR062W	PLP1	Q04004	230 aa		4.01	□□□□□ -1.77
LCB2	YDR062W	HNT1	Q04344	158 aa	Known RBP	4.01	□□□□□ -1.77
LCB2	YDR062W	YPL264C	Q08980	353 aa		4.01	□□□□□ -1.77
LCB2	YDR062W	TDA8	Q6B2U8	126 aa		4.01	□□□□□ -1.77
LCB2	YDR062W	COX10	P21592	462 aa		4	□□□□□ -1.77
LCB2	YDR062W	PRE7	P23724	241 aa	Known RBP	4	□□□□□ -1.77
LCB2	YDR062W	CNB1	P25296	175 aa		4	□□□□□ -1.77
LCB2	YDR062W	UBC8	P28263	218 aa		4	□□□□□ -1.77
LCB2	YDR062W	RPF1	P38805	295 aa	Known RBP	4	□□□□□ -1.77
LCB2	YDR062W	AST2	P39945	430 aa	Known RBP	4	□□□□□ -1.77
LCB2	YDR062W	MRPS16	Q02608	121 aa		4	□□□□□ -1.77
LCB2	YDR062W	HPT1	Q04178	221 aa	Known RBP	4	□□□□□ -1.77
LCB2	YDR062W	LPP1	Q04396	274 aa		4	□□□□□ -1.77
LCB2	YDR062W	SHH4	Q06236	168 aa		4	□□□□□ -1.77
LCB2	YDR062W	MHT1	Q12525	324 aa		4	□□□□□ -1.77
LCB2	YDR062W	ISD11	Q6Q560	94 aa		4	□□□□□ -1.77
LCB2	YDR062W	ECM29	P38737	1868 aa		4	□□□□□ -1.77
LCB2	YDR062W	MBF1	O14467	151 aa	Known RBP	4	□□□□□ -1.77
LCB2	YDR062W	DSF1	P0CX08	502 aa		4	□□□□□ -1.77
LCB2	YDR062W	YNR073C	P0CX09	502 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 69.4 ms