RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W MSA2P36157 363 aa2.28□□□□□ -2.04
SWD3YBR175W SWD3P38123 315 aa2.28□□□□□ -2.04
SWD3YBR175W GPI18P38211 433 aa2.28□□□□□ -2.04
SWD3YBR175W SLM6P38343 150 aa2.28□□□□□ -2.04
SWD3YBR175W TRR2P38816 342 aa2.28□□□□□ -2.04
SWD3YBR175W CYC2P38909 366 aa2.28□□□□□ -2.04
SWD3YBR175W TEM1P38987 245 aa2.28□□□□□ -2.04
SWD3YBR175W AGE2P40529 298 aa2.28□□□□□ -2.04
SWD3YBR175W UFD1P53044 361 aa2.28□□□□□ -2.04
SWD3YBR175W YGL260WP53056 76 aa2.28□□□□□ -2.04
SWD3YBR175W YGL204CP53089 101 aa2.28□□□□□ -2.04
SWD3YBR175W CAX4P53223 239 aa2.28□□□□□ -2.04
SWD3YBR175W MPA43P53583 542 aaPredicted RBP2.28□□□□□ -2.04
SWD3YBR175W YNL010WP53981 241 aaKnown RBP2.28□□□□□ -2.04
SWD3YBR175W DID2P69771 204 aa2.28□□□□□ -2.04
SWD3YBR175W HSK3P69852 69 aa2.28□□□□□ -2.04
SWD3YBR175W OSH6Q02201 448 aa2.28□□□□□ -2.04
SWD3YBR175W AIM34Q03673 198 aa2.28□□□□□ -2.04
SWD3YBR175W YMD8Q03697 442 aa2.28□□□□□ -2.04
SWD3YBR175W GRH1Q04410 372 aaKnown RBP2.28□□□□□ -2.04
SWD3YBR175W YTH1Q06102 208 aaPredicted RBP2.28□□□□□ -2.04
SWD3YBR175W SHH4Q06236 168 aa2.28□□□□□ -2.04
SWD3YBR175W SUE1Q06524 206 aa2.28□□□□□ -2.04
SWD3YBR175W YOL019WQ08157 551 aa2.28□□□□□ -2.04
SWD3YBR175W YDL211CQ12121 372 aa2.28□□□□□ -2.04
SWD3YBR175W EFG1Q3E705 233 aaKnown RBP2.28□□□□□ -2.04
SWD3YBR175W TDA8Q6B2U8 126 aa2.28□□□□□ -2.04
SWD3YBR175W GCN2P15442 1659 aa2.28□□□□□ -2.05
SWD3YBR175W IML1P47170 1584 aa2.27□□□□□ -2.05
SWD3YBR175W SRB8P25648 1427 aa2.27□□□□□ -2.05
SWD3YBR175W YLR462WO13556 202 aa2.27□□□□□ -2.05
SWD3YBR175W MBF1O14467 151 aaKnown RBP2.27□□□□□ -2.05
SWD3YBR175W DSF1P0CX08 502 aa2.27□□□□□ -2.05
SWD3YBR175W YNR073CP0CX09 502 aa2.27□□□□□ -2.05
SWD3YBR175W FCY2P17064 533 aa2.27□□□□□ -2.05
SWD3YBR175W BUB2P26448 306 aaPredicted RBP2.27□□□□□ -2.05
SWD3YBR175W SFC1P33303 322 aa2.27□□□□□ -2.05
SWD3YBR175W UPS2P35200 230 aa2.27□□□□□ -2.05
SWD3YBR175W FMP46P36141 133 aaKnown RBP2.27□□□□□ -2.05
SWD3YBR175W MRPL27P36526 146 aaPredicted RBP2.27□□□□□ -2.05
SWD3YBR175W BDH1P39714 382 aa2.27□□□□□ -2.05
SWD3YBR175W AST2P39945 430 aaKnown RBP2.27□□□□□ -2.05
SWD3YBR175W YEL075CP39972 122 aa2.27□□□□□ -2.05
SWD3YBR175W IRC22P40006 225 aa2.27□□□□□ -2.05
SWD3YBR175W GLE2P40066 365 aa2.27□□□□□ -2.05
SWD3YBR175W RPA43P46669 326 aa2.27□□□□□ -2.05
SWD3YBR175W PGU1P47180 361 aa2.27□□□□□ -2.05
SWD3YBR175W BOR1P53838 576 aa2.27□□□□□ -2.05
SWD3YBR175W GAS3Q03655 524 aa2.27□□□□□ -2.05
SWD3YBR175W TVP15Q03860 143 aa2.27□□□□□ -2.05
SWD3YBR175W PLP1Q04004 230 aa2.27□□□□□ -2.05
SWD3YBR175W ECM11Q04110 302 aa2.27□□□□□ -2.05
SWD3YBR175W HPT1Q04178 221 aaKnown RBP2.27□□□□□ -2.05
SWD3YBR175W LPP1Q04396 274 aa2.27□□□□□ -2.05
SWD3YBR175W NIP7Q08962 181 aaKnown RBP2.27□□□□□ -2.05
SWD3YBR175W YPL264CQ08980 353 aa2.27□□□□□ -2.05
SWD3YBR175W PST1Q12355 444 aa2.27□□□□□ -2.05
SWD3YBR175W YPL247CQ12523 523 aa2.27□□□□□ -2.05
SWD3YBR175W MHT1Q12525 324 aa2.27□□□□□ -2.05
SWD3YBR175W YOR020W-AQ3E824 90 aa2.27□□□□□ -2.05
SWD3YBR175W TY1B-NL2Q99337 1749 aaKnown RBP2.26□□□□□ -2.05
SWD3YBR175W YBT1P32386 1661 aa2.26□□□□□ -2.05
SWD3YBR175W YEL009C-AA0A023PZF2 135 aa2.26□□□□□ -2.05
SWD3YBR175W YPR170W-BP0C5R9 85 aa2.26□□□□□ -2.05
SWD3YBR175W IDP1P21954 428 aaKnown RBP2.26□□□□□ -2.05
SWD3YBR175W PRE7P23724 241 aaKnown RBP2.26□□□□□ -2.05
SWD3YBR175W CNB1P25296 175 aa2.26□□□□□ -2.05
SWD3YBR175W ATG22P25568 528 aa2.26□□□□□ -2.05
SWD3YBR175W ECM34P38728 170 aa2.26□□□□□ -2.05
SWD3YBR175W RPF1P38805 295 aaKnown RBP2.26□□□□□ -2.05
SWD3YBR175W MDM34P53083 459 aa2.26□□□□□ -2.05
SWD3YBR175W ARO8P53090 500 aaKnown RBP2.26□□□□□ -2.05
SWD3YBR175W SWP1Q02795 286 aa2.26□□□□□ -2.05
SWD3YBR175W GPI17Q04080 534 aa2.26□□□□□ -2.05
SWD3YBR175W YPL257WQ08974 193 aa2.26□□□□□ -2.05
SWD3YBR175W YPL162CQ12042 273 aa2.26□□□□□ -2.05
SWD3YBR175W RIO1Q12196 484 aaKnown RBP2.26□□□□□ -2.05
SWD3YBR175W SMT3Q12306 101 aaKnown RBP2.26□□□□□ -2.05
SWD3YBR175W YMR230W-AQ3E7B5 62 aa2.26□□□□□ -2.05
SWD3YBR175W YOL085CQ99345 113 aa2.26□□□□□ -2.05
SWD3YBR175W TY2B-BQ12491 1770 aa2.26□□□□□ -2.05
SWD3YBR175W COX10P21592 462 aa2.25□□□□□ -2.05
SWD3YBR175W RNP1P32385 249 aa2.25□□□□□ -2.05
SWD3YBR175W YKL102CP34249 101 aa2.25□□□□□ -2.05
SWD3YBR175W UTP30P36144 274 aaKnown RBP2.25□□□□□ -2.05
SWD3YBR175W YBR063CP38083 404 aa2.25□□□□□ -2.05
SWD3YBR175W YGP1P38616 354 aaKnown RBP2.25□□□□□ -2.05
SWD3YBR175W UFE1P41834 346 aa2.25□□□□□ -2.05
SWD3YBR175W ARP3P47117 449 aaKnown RBP2.25□□□□□ -2.05
SWD3YBR175W GIS2P53849 153 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
SWD3YBR175W IMP4P53941 290 aaKnown RBP2.25□□□□□ -2.05
SWD3YBR175W YDR476CQ03362 224 aa2.25□□□□□ -2.05
SWD3YBR175W DGA1Q08650 418 aa2.25□□□□□ -2.05
SWD3YBR175W BBP1Q12365 385 aa2.25□□□□□ -2.05
SWD3YBR175W ISD11Q6Q560 94 aa2.25□□□□□ -2.05
SWD3YBR175W YFR032C-BQ8TGU2 87 aa2.25□□□□□ -2.05
SWD3YBR175W RSF2P46974 1380 aa2.24□□□□□ -2.05
SWD3YBR175W PET9P18239 318 aaKnown RBP2.24□□□□□ -2.05
SWD3YBR175W RCN1P36054 211 aa2.24□□□□□ -2.05
SWD3YBR175W TVP38P36164 337 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms