RNA–Protein interactions for RNA: snR45

snR45, Transcript of C/D box small nucleolar RNA (snoRNA) but not shown to be active, yeast

Gene snR45, Length 172 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR45	snR45	FIG4	P42837	879 aa		2.9	□□□□□ -1.95
snR45	snR45	ARI1	P53111	347 aa	Known RBP	2.9	□□□□□ -1.95
snR45	snR45	SAC7	P17121	654 aa		2.89	□□□□□ -1.95
snR45	snR45	YPT53	P36019	220 aa		2.88	□□□□□ -1.95
snR45	snR45	MRPL16	P38064	232 aa		2.88	□□□□□ -1.95
snR45	snR45	FRA1	Q07825	749 aa		2.88	□□□□□ -1.95
snR45	snR45	YLR122C	Q12312	125 aa		2.88	□□□□□ -1.95
snR45	snR45	ESC8	Q08119	714 aa		2.87	□□□□□ -1.95
snR45	snR45	MMP1	Q12372	583 aa		2.87	□□□□□ -1.95
snR45	snR45	TAD3	Q9URQ3	322 aa		2.87	□□□□□ -1.95
snR45	snR45	NIT1	P40447	199 aa		2.86	□□□□□ -1.95
snR45	snR45	MAG2	Q06436	670 aa	Known RBP	2.86	□□□□□ -1.95
snR45	snR45	PBS2	P08018	668 aa		2.85	□□□□□ -1.95
snR45	snR45	NAB2	P32505	525 aa	Known RBP RIP-Chip data	2.85	□□□□□ -1.95	not detected
snR45	snR45	STB3	Q12427	513 aa		2.85	□□□□□ -1.95
snR45	snR45	PGM2	P37012	569 aa	Known RBP	2.84	□□□□□ -1.95
snR45	snR45	ALG14	P38242	237 aa		2.84	□□□□□ -1.95
snR45	snR45	SPR3	P41901	512 aa		2.84	□□□□□ -1.95
snR45	snR45	SFA1	P32771	386 aa		2.83	□□□□□ -1.96
snR45	snR45	ATG20	Q07528	640 aa		2.83	□□□□□ -1.96
snR45	snR45	MCM16	Q12262	181 aa		2.83	□□□□□ -1.96
snR45	snR45	MAM3	Q12296	706 aa		2.83	□□□□□ -1.96
snR45	snR45	TEC1	P18412	486 aa		2.82	□□□□□ -1.96
snR45	snR45	IRE1	P32361	1115 aa		2.82	□□□□□ -1.96
snR45	snR45	RSC30	P38781	883 aa		2.82	□□□□□ -1.96
snR45	snR45	GIP4	P39732	760 aa		2.82	□□□□□ -1.96
snR45	snR45	JJJ2	P46997	583 aa		2.82	□□□□□ -1.96
snR45	snR45	WTM2	Q12206	467 aa		2.82	□□□□□ -1.96
snR45	snR45	RPP1A	P05318	106 aa	Predicted RBP	2.81	□□□□□ -1.96
snR45	snR45	GLN1	P32288	370 aa	Known RBP	2.81	□□□□□ -1.96
snR45	snR45	MSC7	P38694	644 aa		2.81	□□□□□ -1.96
snR45	snR45	TAF1	P46677	1066 aa		2.81	□□□□□ -1.96
snR45	snR45	YPR084W	Q06821	456 aa		2.81	□□□□□ -1.96
snR45	snR45	GAS5	Q08193	484 aa		2.81	□□□□□ -1.96
snR45	snR45	ESS1	P22696	170 aa		2.8	□□□□□ -1.96
snR45	snR45	SEG2	P34250	1132 aa		2.8	□□□□□ -1.96
snR45	snR45	YGR130C	P53278	816 aa		2.8	□□□□□ -1.96
snR45	snR45	CHS2	P14180	963 aa		2.79	□□□□□ -1.96
snR45	snR45	SAF1	P38352	637 aa		2.79	□□□□□ -1.96
snR45	snR45	PSH1	Q12161	406 aa		2.79	□□□□□ -1.96
snR45	snR45	PDC6	P26263	563 aa	Known RBP	2.78	□□□□□ -1.96
snR45	snR45	YJU3	P28321	313 aa		2.78	□□□□□ -1.96
snR45	snR45	RRM3	P38766	723 aa		2.78	□□□□□ -1.96
snR45	snR45	IES2	P40154	320 aa		2.78	□□□□□ -1.96
snR45	snR45	SHM1	P37292	490 aa	Predicted RBP	2.77	□□□□□ -1.97
snR45	snR45	ALA1	P40825	983 aa	Known RBP	2.77	□□□□□ -1.97
snR45	snR45	HDA2	Q06629	674 aa		2.77	□□□□□ -1.97
snR45	snR45	CYC7	P00045	113 aa		2.76	□□□□□ -1.97
snR45	snR45	NAR1	P23503	491 aa	Known RBP	2.76	□□□□□ -1.97
snR45	snR45	PRP43	P53131	767 aa	Known RBP	2.76	□□□□□ -1.97
snR45	snR45	GIS4	Q04233	774 aa		2.76	□□□□□ -1.97
snR45	snR45	SPT2	P06843	333 aa	Predicted RBP	2.75	□□□□□ -1.97
snR45	snR45	SPO74	P45819	413 aa		2.75	□□□□□ -1.97
snR45	snR45	SUM1	P46676	1062 aa		2.75	□□□□□ -1.97
snR45	snR45	ECL1	P48235	211 aa		2.75	□□□□□ -1.97
snR45	snR45	NUP42	P49686	430 aa	Known RBP	2.75	□□□□□ -1.97
snR45	snR45	RSC6	P25632	483 aa		2.74	□□□□□ -1.97
snR45	snR45	CKB1	P43639	278 aa		2.74	□□□□□ -1.97
snR45	snR45	DAT1	P13483	248 aa	Known RBP	2.73	□□□□□ -1.97
snR45	snR45	GUT2	P32191	649 aa		2.73	□□□□□ -1.97
snR45	snR45	NGR1	P32831	672 aa	Known RBP	2.73	□□□□□ -1.97
snR45	snR45	LRG1	P35688	1017 aa		2.73	□□□□□ -1.97
snR45	snR45	UTP7	P40055	554 aa	Known RBP	2.73	□□□□□ -1.97
snR45	snR45	UTR2	P32623	467 aa		2.72	□□□□□ -1.97
snR45	snR45	LEU1	P07264	779 aa	Known RBP	2.71	□□□□□ -1.98
snR45	snR45	TBS1	P38114	1094 aa		2.71	□□□□□ -1.98
snR45	snR45	HEH2	Q03281	663 aa		2.71	□□□□□ -1.98
snR45	snR45	PRK1	P40494	810 aa		2.69	□□□□□ -1.98
snR45	snR45	GSF2	Q04697	403 aa	Known RBP	2.69	□□□□□ -1.98
snR45	snR45	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	not detected
snR45	snR45	GAS1	P22146	559 aa	Known RBP	2.68	□□□□□ -1.98
snR45	snR45	POL12	P38121	705 aa	Predicted RBP	2.68	□□□□□ -1.98
snR45	snR45	SEA4	P38164	1038 aa		2.68	□□□□□ -1.98
snR45	snR45	RPS31	P05759	152 aa	Known RBP	2.67	□□□□□ -1.98
snR45	snR45	RGP1	P16664	663 aa		2.67	□□□□□ -1.98
snR45	snR45	ARG8	P18544	423 aa		2.67	□□□□□ -1.98
snR45	snR45	DSF2	P38213	736 aa		2.67	□□□□□ -1.98
snR45	snR45	AKR1	P39010	764 aa		2.67	□□□□□ -1.98
snR45	snR45	DFG16	Q99234	619 aa		2.67	□□□□□ -1.98
snR45	snR45	NFS1	P25374	497 aa		2.66	□□□□□ -1.98
snR45	snR45	YML122C	Q03207	126 aa		2.66	□□□□□ -1.98
snR45	snR45	PKH3	Q03306	898 aa	Predicted RBP	2.66	□□□□□ -1.98
snR45	snR45	ALD2	P47771	506 aa		2.65	□□□□□ -1.99
snR45	snR45	DIT2	P21595	489 aa		2.64	□□□□□ -1.99
snR45	snR45	NAM7	P30771	971 aa	Known RBP	2.64	□□□□□ -1.99
snR45	snR45	THI80	P35202	319 aa		2.64	□□□□□ -1.99
snR45	snR45	FLR1	P38124	548 aa		2.64	□□□□□ -1.99
snR45	snR45	STE20	Q03497	939 aa	Known RBP	2.64	□□□□□ -1.99
snR45	snR45	ISR1	Q06098	443 aa	Known RBP	2.64	□□□□□ -1.99
snR45	snR45	CDA2	Q06703	312 aa		2.64	□□□□□ -1.99
snR45	snR45	SLP1	Q12232	587 aa		2.64	□□□□□ -1.99
snR45	snR45	MSB1	P21339	1137 aa	Known RBP	2.63	□□□□□ -1.99
snR45	snR45	TY1A-NL1	Q12391	440 aa	Known RBP	2.63	□□□□□ -1.99
snR45	snR45	SDH1	Q00711	640 aa		2.62	□□□□□ -1.99
snR45	snR45	TSA1	P34760	196 aa	Known RBP	2.61	□□□□□ -1.99
snR45	snR45	SLX8	P40072	274 aa		2.61	□□□□□ -1.99
snR45	snR45	REC8	Q12188	680 aa		2.6	□□□□□ -1.99
snR45	snR45	YHL008C	P38750	627 aa		2.59	□□□□□ -1.99
snR45	snR45	YNR065C	P53751	1116 aa		2.59	□□□□□ -1.99
snR45	snR45	YTA6	P40328	754 aa		2.58	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms