RNA–Protein interactions for RNA: YPR175W

DPB2, Transcript of Second largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB2, Length 2,070 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB2YPR175W MCM2P29469 868 aa8.3□□□□□ -1.08
DPB2YPR175W RRD1P40454 393 aaKnown RBP8.3□□□□□ -1.08
DPB2YPR175W ALD3P54114 506 aa8.3□□□□□ -1.08
DPB2YPR175W ELP4Q02884 456 aaKnown RBP8.3□□□□□ -1.08
DPB2YPR175W YDL129WQ07555 291 aa8.3□□□□□ -1.08
DPB2YPR175W YBR197CP38306 217 aa8.3□□□□□ -1.08
DPB2YPR175W TRS120Q04183 1289 aa8.3□□□□□ -1.08
DPB2YPR175W TRS33Q99394 268 aa8.3□□□□□ -1.08
DPB2YPR175W MGE1P38523 228 aa8.29□□□□□ -1.08
DPB2YPR175W APC11Q12157 165 aa8.29□□□□□ -1.08
DPB2YPR175W RPB10P22139 70 aa8.28□□□□□ -1.08
DPB2YPR175W NGR1P32831 672 aaKnown RBP8.28□□□□□ -1.08
DPB2YPR175W CAB1Q04430 367 aa8.28□□□□□ -1.08
DPB2YPR175W DAK2P43550 591 aa8.28□□□□□ -1.08
DPB2YPR175W KXD1P53158 218 aa8.27□□□□□ -1.09
DPB2YPR175W BNI4P53858 892 aa8.27□□□□□ -1.09
DPB2YPR175W FAR11P53917 953 aa8.27□□□□□ -1.09
DPB2YPR175W VAC8P39968 578 aa8.26□□□□□ -1.09
DPB2YPR175W IOC3P43596 787 aa8.26□□□□□ -1.09
DPB2YPR175W TOS4Q06266 489 aa8.26□□□□□ -1.09
DPB2YPR175W PRT1P06103 763 aaKnown RBP8.26□□□□□ -1.09
DPB2YPR175W ATG20Q07528 640 aa8.26□□□□□ -1.09
DPB2YPR175W YOL098CQ12496 1037 aa8.26□□□□□ -1.09
DPB2YPR175W RPT1P33299 467 aaKnown RBP8.25□□□□□ -1.09
DPB2YPR175W FPR4Q06205 392 aaPredicted RBP8.25□□□□□ -1.09
DPB2YPR175W SWI5P08153 709 aa8.25□□□□□ -1.09
DPB2YPR175W RPS6AP0CX37 236 aaKnown RBP8.25□□□□□ -1.09
DPB2YPR175W RPS6BP0CX38 236 aaPredicted RBP8.25□□□□□ -1.09
DPB2YPR175W ALD6P54115 500 aaKnown RBP8.25□□□□□ -1.09
DPB2YPR175W CYT1P07143 309 aa8.24□□□□□ -1.09
DPB2YPR175W VPS16Q03308 798 aa8.24□□□□□ -1.09
DPB2YPR175W ISC10P32645 267 aa8.23□□□□□ -1.09
DPB2YPR175W NCR1Q12200 1170 aa8.23□□□□□ -1.09
DPB2YPR175W YFL034WP43564 1073 aa8.23□□□□□ -1.09
DPB2YPR175W YAF9P53930 226 aa8.22□□□□□ -1.09
DPB2YPR175W PIN2Q12057 282 aa8.21□□□□□ -1.1
DPB2YPR175W SPR3P41901 512 aa8.2□□□□□ -1.1
DPB2YPR175W RNH70P53331 553 aa8.2□□□□□ -1.1
DPB2YPR175W HXT5P38695 592 aa8.19□□□□□ -1.1
DPB2YPR175W FOX2Q02207 900 aaKnown RBP8.19□□□□□ -1.1
DPB2YPR175W SSF2Q12153 453 aaPredicted RBP8.19□□□□□ -1.1
DPB2YPR175W SAP30P38429 201 aa8.18□□□□□ -1.1
DPB2YPR175W NMD2P38798 1089 aaKnown RBP8.18□□□□□ -1.1
DPB2YPR175W EMW1P42842 904 aaKnown RBP8.18□□□□□ -1.1
DPB2YPR175W APP1P53933 587 aa8.18□□□□□ -1.1
DPB2YPR175W MTO1P53070 669 aa8.18□□□□□ -1.1
DPB2YPR175W SPT2P06843 333 aaPredicted RBP8.17□□□□□ -1.1
DPB2YPR175W CIT2P08679 460 aa8.17□□□□□ -1.1
DPB2YPR175W RPS26AP39938 119 aaKnown RBP8.17□□□□□ -1.1
DPB2YPR175W RPS26BP39939 119 aaKnown RBP8.17□□□□□ -1.1
DPB2YPR175W TAT2P38967 592 aa8.16□□□□□ -1.1
DPB2YPR175W ISU1Q03020 165 aa8.15□□□□□ -1.1
DPB2YPR175W ATG36P46983 293 aa8.15□□□□□ -1.11
DPB2YPR175W YPQ2Q06328 317 aa8.15□□□□□ -1.11
DPB2YPR175W CYC8P14922 966 aa8.14□□□□□ -1.11
DPB2YPR175W CWH41P53008 833 aa8.14□□□□□ -1.11
DPB2YPR175W UFD2P54860 961 aa8.14□□□□□ -1.11
DPB2YPR175W YML082WQ04533 649 aaKnown RBP8.14□□□□□ -1.11
DPB2YPR175W PTC2P39966 464 aaKnown RBP8.13□□□□□ -1.11
DPB2YPR175W BUD6P41697 788 aa8.13□□□□□ -1.11
DPB2YPR175W TFG1P41895 735 aaPredicted RBP8.13□□□□□ -1.11
DPB2YPR175W BDS1Q08347 646 aa8.13□□□□□ -1.11
DPB2YPR175W SPT23P35210 1082 aa8.12□□□□□ -1.11
DPB2YPR175W CDC55Q00362 526 aa8.12□□□□□ -1.11
DPB2YPR175W MRPL33P20084 86 aa8.12□□□□□ -1.11
DPB2YPR175W PAT1P25644 796 aaKnown RBP8.12□□□□□ -1.11
DPB2YPR175W SPT16P32558 1035 aaKnown RBP8.12□□□□□ -1.11
DPB2YPR175W SUT1P53032 299 aaKnown RBP8.12□□□□□ -1.11
DPB2YPR175W FBP26P32604 452 aa8.11□□□□□ -1.11
DPB2YPR175W UTR2P32623 467 aa8.11□□□□□ -1.11
DPB2YPR175W FAA3P39002 694 aa8.11□□□□□ -1.11
DPB2YPR175W YGR122WP53272 402 aa8.11□□□□□ -1.11
DPB2YPR175W YNL011CP53980 444 aa8.11□□□□□ -1.11
DPB2YPR175W RMD1Q03441 430 aa8.1□□□□□ -1.11
DPB2YPR175W PUS5Q06244 254 aa8.1□□□□□ -1.11
DPB2YPR175W HXK1P04806 485 aaKnown RBP8.1□□□□□ -1.11
DPB2YPR175W NSE3Q05541 303 aa8.1□□□□□ -1.11
DPB2YPR175W SDH2P21801 266 aa8.09□□□□□ -1.11
DPB2YPR175W FKH1P40466 484 aa8.09□□□□□ -1.11
DPB2YPR175W MAD1P40957 749 aa8.09□□□□□ -1.11
DPB2YPR175W SRP40P32583 406 aaPredicted RBP8.09□□□□□ -1.11
DPB2YPR175W VPS35P34110 944 aa8.09□□□□□ -1.11
DPB2YPR175W RSC4Q02206 625 aa8.09□□□□□ -1.11
DPB2YPR175W RPN4Q03465 531 aa8.09□□□□□ -1.11
DPB2YPR175W GCD6P32501 712 aaKnown RBP8.08□□□□□ -1.12
DPB2YPR175W ALG12P53730 551 aa8.08□□□□□ -1.12
DPB2YPR175W RAD2P07276 1031 aa8.07□□□□□ -1.12
DPB2YPR175W STE6P12866 1290 aa8.07□□□□□ -1.12
DPB2YPR175W PEP7P32609 515 aa8.06□□□□□ -1.12
DPB2YPR175W YKL091CP33324 310 aaKnown RBP8.06□□□□□ -1.12
DPB2YPR175W YNL165WP53891 406 aa8.06□□□□□ -1.12
DPB2YPR175W VMA3P25515 160 aa8.06□□□□□ -1.12
DPB2YPR175W KIP2P28743 706 aa8.06□□□□□ -1.12
DPB2YPR175W BDF2Q07442 638 aa8.06□□□□□ -1.12
DPB2YPR175W WTM2Q12206 467 aa8.06□□□□□ -1.12
DPB2YPR175W ESF1Q06344 628 aaKnown RBP8.05□□□□□ -1.12
DPB2YPR175W PBP2P38151 413 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
DPB2YPR175W RTT106P40161 455 aa8.04□□□□□ -1.12
DPB2YPR175W PPG1P32838 368 aa8.04□□□□□ -1.12
DPB2YPR175W RGD2P43556 714 aa8.04□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 40 ms