RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C UTP22P53254 1237 aaPredicted RBP10.16□□□□□ -0.78
SRP54YPR088C PKH1Q03407 766 aa10.16□□□□□ -0.78
SRP54YPR088C RPG1P38249 964 aaKnown RBP10.15□□□□□ -0.79
SRP54YPR088C YBL086CP38177 466 aa10.14□□□□□ -0.79
SRP54YPR088C ITC1P53125 1264 aa10.13□□□□□ -0.79
SRP54YPR088C NMD2P38798 1089 aaKnown RBP10.12□□□□□ -0.79
SRP54YPR088C ALD3P54114 506 aa10.12□□□□□ -0.79
SRP54YPR088C ECM16Q04217 1267 aaKnown RBP10.12□□□□□ -0.79
SRP54YPR088C SSA2P10592 639 aaKnown RBP10.11□□□□□ -0.79
SRP54YPR088C RPC31P17890 251 aa10.11□□□□□ -0.79
SRP54YPR088C UGA2P38067 497 aa10.11□□□□□ -0.79
SRP54YPR088C FCP1Q03254 732 aa10.11□□□□□ -0.79
SRP54YPR088C PSH1Q12161 406 aa10.11□□□□□ -0.79
SRP54YPR088C RAT1Q02792 1006 aaKnown RBP10.11□□□□□ -0.79
SRP54YPR088C MTC5Q03897 1148 aa10.11□□□□□ -0.79
SRP54YPR088C HAT1Q12341 374 aa10.11□□□□□ -0.79
SRP54YPR088C SSK22P25390 1331 aaPredicted RBP10.1□□□□□ -0.79
SRP54YPR088C SUP35P05453 685 aaKnown RBP10.1□□□□□ -0.79
SRP54YPR088C TOS1P38288 455 aa10.09□□□□□ -0.79
SRP54YPR088C SSF1P38789 453 aaPredicted RBP10.09□□□□□ -0.79
SRP54YPR088C CTI6Q08923 506 aa10.08□□□□□ -0.8
SRP54YPR088C HPC2Q01448 625 aa10.07□□□□□ -0.8
SRP54YPR088C DIB1Q06819 143 aaPredicted RBP10.07□□□□□ -0.8
SRP54YPR088C RFC1P38630 861 aaKnown RBP10.07□□□□□ -0.8
SRP54YPR088C NKP2Q06162 153 aa10.07□□□□□ -0.8
SRP54YPR088C NCB2Q92317 146 aa10.07□□□□□ -0.8
SRP54YPR088C SAC3P46674 1301 aa10.06□□□□□ -0.8
SRP54YPR088C HXT10P43581 546 aa10.06□□□□□ -0.8
SRP54YPR088C RIX7Q07844 837 aaKnown RBP10.06□□□□□ -0.8
SRP54YPR088C CDC16P09798 840 aa10.05□□□□□ -0.8
SRP54YPR088C BDP1P46678 594 aa10.04□□□□□ -0.8
SRP54YPR088C SNU66Q12420 587 aaPredicted RBP10.04□□□□□ -0.8
SRP54YPR088C BDF2Q07442 638 aa10.03□□□□□ -0.8
SRP54YPR088C RAD50P12753 1312 aa10.03□□□□□ -0.8
SRP54YPR088C GYP5Q12344 894 aa10.01□□□□□ -0.81
SRP54YPR088C SYF1Q04048 859 aaPredicted RBP10□□□□□ -0.81
SRP54YPR088C NOT3P06102 836 aaKnown RBP10□□□□□ -0.81
SRP54YPR088C ECM21P38167 1117 aaKnown RBP10□□□□□ -0.81
SRP54YPR088C YGL242CP53066 181 aa10□□□□□ -0.81
SRP54YPR088C PDR18P53756 1333 aa9.99□□□□□ -0.81
SRP54YPR088C MLC1P53141 149 aa9.99□□□□□ -0.81
SRP54YPR088C UBP16Q02863 499 aa9.99□□□□□ -0.81
SRP54YPR088C ADR1P07248 1323 aa9.98□□□□□ -0.81
SRP54YPR088C SLA1P32790 1244 aa9.98□□□□□ -0.81
SRP54YPR088C PFF1P38244 976 aa9.98□□□□□ -0.81
SRP54YPR088C IRC3Q06683 689 aa9.98□□□□□ -0.81
SRP54YPR088C SEC18P18759 758 aaKnown RBP9.97□□□□□ -0.81
SRP54YPR088C KTR3P38130 404 aaPredicted RBP9.96□□□□□ -0.81
SRP54YPR088C DPH6Q12429 685 aa9.96□□□□□ -0.81
SRP54YPR088C SIT4P20604 311 aa9.96□□□□□ -0.82
SRP54YPR088C NGR1P32831 672 aaKnown RBP9.96□□□□□ -0.82
SRP54YPR088C ALO1P54783 526 aaKnown RBP9.96□□□□□ -0.82
SRP54YPR088C BRE1Q07457 700 aaKnown RBP9.96□□□□□ -0.82
SRP54YPR088C AI2P03876 854 aa9.95□□□□□ -0.82
SRP54YPR088C VAS1P07806 1104 aaKnown RBP9.95□□□□□ -0.82
SRP54YPR088C FRD1P32614 470 aaKnown RBP9.95□□□□□ -0.82
SRP54YPR088C YIR014WP40570 242 aa9.95□□□□□ -0.82
SRP54YPR088C GCR2Q01722 534 aa9.95□□□□□ -0.82
SRP54YPR088C ERT1P38140 529 aa9.94□□□□□ -0.82
SRP54YPR088C ICP55P40051 511 aa9.94□□□□□ -0.82
SRP54YPR088C MSN5P52918 1224 aa9.94□□□□□ -0.82
SRP54YPR088C SAS4Q04003 481 aa9.94□□□□□ -0.82
SRP54YPR088C THI3Q07471 609 aa9.94□□□□□ -0.82
SRP54YPR088C PMD1P32634 1753 aa9.94□□□□□ -0.82
SRP54YPR088C MGM1P32266 881 aa9.93□□□□□ -0.82
SRP54YPR088C BRN1P38170 754 aa9.93□□□□□ -0.82
SRP54YPR088C RPN1P38764 993 aaKnown RBP9.93□□□□□ -0.82
SRP54YPR088C ERO1Q03103 563 aa9.93□□□□□ -0.82
SRP54YPR088C RMD1Q03441 430 aa9.93□□□□□ -0.82
SRP54YPR088C SRC1Q03707 834 aa9.93□□□□□ -0.82
SRP54YPR088C POM152P39685 1337 aa9.93□□□□□ -0.82
SRP54YPR088C CAF20P12962 161 aaKnown RBP9.93□□□□□ -0.82
SRP54YPR088C YKL222CP35995 705 aa9.93□□□□□ -0.82
SRP54YPR088C NUG1P40010 520 aaKnown RBP9.93□□□□□ -0.82
SRP54YPR088C MRPS35P53292 345 aa9.93□□□□□ -0.82
SRP54YPR088C YNL193WP53870 558 aa9.93□□□□□ -0.82
SRP54YPR088C RPN7Q06103 429 aaKnown RBP9.93□□□□□ -0.82
SRP54YPR088C SMY1P32364 656 aaKnown RBP9.92□□□□□ -0.82
SRP54YPR088C DLD1P32891 587 aa9.92□□□□□ -0.82
SRP54YPR088C PIF1P07271 859 aa9.91□□□□□ -0.82
SRP54YPR088C RRI2Q12348 645 aa9.91□□□□□ -0.82
SRP54YPR088C EAF6P47128 113 aa9.9□□□□□ -0.82
SRP54YPR088C CWH41P53008 833 aa9.9□□□□□ -0.82
SRP54YPR088C CTT1P06115 562 aa9.89□□□□□ -0.83
SRP54YPR088C KRE2P27809 442 aa9.89□□□□□ -0.83
SRP54YPR088C KTR1P27810 393 aaKnown RBP9.89□□□□□ -0.83
SRP54YPR088C HAL5P38970 855 aaKnown RBP9.89□□□□□ -0.83
SRP54YPR088C EPS1P40557 701 aa9.89□□□□□ -0.83
SRP54YPR088C RIM20Q12033 661 aa9.89□□□□□ -0.83
SRP54YPR088C DUR1,2P32528 1835 aaKnown RBP9.89□□□□□ -0.83
SRP54YPR088C GLO3P38682 493 aaKnown RBP9.89□□□□□ -0.83
SRP54YPR088C SPL2P38839 148 aa9.89□□□□□ -0.83
SRP54YPR088C FPR4Q06205 392 aaPredicted RBP9.89□□□□□ -0.83
SRP54YPR088C OSH3P38713 996 aaKnown RBP9.88□□□□□ -0.83
SRP54YPR088C PIB2P53191 635 aa9.88□□□□□ -0.83
SRP54YPR088C RPT4P53549 437 aaKnown RBP9.88□□□□□ -0.83
SRP54YPR088C AAP1P37898 856 aaKnown RBP9.87□□□□□ -0.83
SRP54YPR088C PBY1P38254 753 aa9.87□□□□□ -0.83
SRP54YPR088C HXT13P39924 564 aa9.87□□□□□ -0.83
SRP54YPR088C HXT17P53631 564 aa9.87□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms