RNA–Protein interactions for RNA: YPR054W

SMK1, Transcript of Middle sporulation-specific mitogen-activated protein kinase (MAPK), yeastyeast

Gene SMK1, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMK1YPR054W PDR12Q02785 1511 aa8.33□□□□□ -1.08
SMK1YPR054W PCT1P13259 424 aa8.32□□□□□ -1.08
SMK1YPR054W SIT4P20604 311 aa8.32□□□□□ -1.08
SMK1YPR054W SPT16P32558 1035 aaKnown RBP8.32□□□□□ -1.08
SMK1YPR054W EDE1P34216 1381 aa8.32□□□□□ -1.08
SMK1YPR054W TRM3Q07527 1436 aa8.31□□□□□ -1.08
SMK1YPR054W MRF1P30775 413 aaPredicted RBP8.31□□□□□ -1.08
SMK1YPR054W NUP157P40064 1391 aaKnown RBP8.31□□□□□ -1.08
SMK1YPR054W DJP1P40564 432 aa8.3□□□□□ -1.08
SMK1YPR054W SRC1Q03707 834 aa8.3□□□□□ -1.08
SMK1YPR054W YEL077CQ3E7X8 1277 aa8.3□□□□□ -1.08
SMK1YPR054W ERG12P07277 443 aa8.29□□□□□ -1.08
SMK1YPR054W YNL115CP53925 644 aa8.29□□□□□ -1.08
SMK1YPR054W IQG1Q12280 1495 aa8.29□□□□□ -1.08
SMK1YPR054W YRB30P53107 440 aaPredicted RBP8.28□□□□□ -1.08
SMK1YPR054W SLY41P22215 453 aa8.27□□□□□ -1.09
SMK1YPR054W KTR1P27810 393 aaKnown RBP8.27□□□□□ -1.09
SMK1YPR054W NOT3P06102 836 aaKnown RBP8.26□□□□□ -1.09
SMK1YPR054W ESS1P22696 170 aa8.26□□□□□ -1.09
SMK1YPR054W VPS24P36095 224 aaKnown RBP8.26□□□□□ -1.09
SMK1YPR054W CST6P40535 587 aa8.26□□□□□ -1.09
SMK1YPR054W YGR130CP53278 816 aa8.26□□□□□ -1.09
SMK1YPR054W MSP1P28737 362 aa8.25□□□□□ -1.09
SMK1YPR054W HST2P53686 357 aa8.25□□□□□ -1.09
SMK1YPR054W CTR9P89105 1077 aa8.25□□□□□ -1.09
SMK1YPR054W FRK1Q03002 865 aaPredicted RBP8.25□□□□□ -1.09
SMK1YPR054W BUD21Q08492 214 aaPredicted RBP8.25□□□□□ -1.09
SMK1YPR054W MMP1Q12372 583 aa8.25□□□□□ -1.09
SMK1YPR054W CSN12P47130 423 aa8.24□□□□□ -1.09
SMK1YPR054W RTF1P53064 558 aa8.24□□□□□ -1.09
SMK1YPR054W TUB4P53378 473 aa8.24□□□□□ -1.09
SMK1YPR054W AGE1Q04412 482 aa8.24□□□□□ -1.09
SMK1YPR054W PAT1P25644 796 aaKnown RBP8.23□□□□□ -1.09
SMK1YPR054W GLN1P32288 370 aaKnown RBP8.23□□□□□ -1.09
SMK1YPR054W PAC1P39946 494 aaKnown RBP8.23□□□□□ -1.09
SMK1YPR054W KIP3P53086 805 aaKnown RBP8.23□□□□□ -1.09
SMK1YPR054W YDL144CQ07589 356 aa8.23□□□□□ -1.09
SMK1YPR054W RLF2Q12495 606 aa8.23□□□□□ -1.09
SMK1YPR054W NOP58Q12499 511 aaKnown RBP8.23□□□□□ -1.09
SMK1YPR054W SUI2P20459 304 aaKnown RBP8.22□□□□□ -1.09
SMK1YPR054W YJU3P28321 313 aa8.22□□□□□ -1.09
SMK1YPR054W GUA1P38625 525 aaKnown RBP8.22□□□□□ -1.09
SMK1YPR054W IOC4Q04213 475 aa8.22□□□□□ -1.09
SMK1YPR054W BUD3P25558 1636 aa8.21□□□□□ -1.09
SMK1YPR054W KNS1P32350 737 aaPredicted RBP8.2□□□□□ -1.1
SMK1YPR054W ARL1P38116 183 aaKnown RBP8.2□□□□□ -1.1
SMK1YPR054W LSP1Q12230 341 aaKnown RBP8.2□□□□□ -1.1
SMK1YPR054W CLA4P48562 842 aa8.19□□□□□ -1.1
SMK1YPR054W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
SMK1YPR054W TAF5P38129 798 aa8.18□□□□□ -1.1
SMK1YPR054W BDP1P46678 594 aa8.18□□□□□ -1.1
SMK1YPR054W YPP1P46951 817 aa8.18□□□□□ -1.1
SMK1YPR054W PKH3Q03306 898 aaPredicted RBP8.18□□□□□ -1.1
SMK1YPR054W RAV1P47104 1357 aa8.18□□□□□ -1.1
SMK1YPR054W NAP1P25293 417 aaKnown RBP8.17□□□□□ -1.1
SMK1YPR054W LAM6Q08001 693 aa8.17□□□□□ -1.1
SMK1YPR054W AIR1P40507 360 aaKnown RBP8.16□□□□□ -1.1
SMK1YPR054W RTC1Q08281 1341 aa8.16□□□□□ -1.1
SMK1YPR054W DNF3Q12674 1656 aa8.16□□□□□ -1.1
SMK1YPR054W SNF2P22082 1703 aa8.15□□□□□ -1.1
SMK1YPR054W TRM1P15565 570 aaKnown RBP8.15□□□□□ -1.1
SMK1YPR054W HAP1P0CE41 1502 aa8.14□□□□□ -1.11
SMK1YPR054W YSP2Q06681 1438 aa8.14□□□□□ -1.11
SMK1YPR054W TRK1P12685 1235 aa8.14□□□□□ -1.11
SMK1YPR054W SCT1P32784 759 aa8.14□□□□□ -1.11
SMK1YPR054W RAD2P07276 1031 aa8.13□□□□□ -1.11
SMK1YPR054W PUS6P53294 404 aa8.13□□□□□ -1.11
SMK1YPR054W MPP10P47083 593 aaKnown RBP8.12□□□□□ -1.11
SMK1YPR054W TBF1Q02457 562 aa8.12□□□□□ -1.11
SMK1YPR054W YDL206WQ12424 762 aa8.12□□□□□ -1.11
SMK1YPR054W CHC1P22137 1653 aaKnown RBP8.11□□□□□ -1.11
SMK1YPR054W ARG8P18544 423 aa8.11□□□□□ -1.11
SMK1YPR054W ESL2P36168 1195 aa8.11□□□□□ -1.11
SMK1YPR054W PUS5Q06244 254 aa8.11□□□□□ -1.11
SMK1YPR054W RPS0BP46654 252 aaKnown RBP8.1□□□□□ -1.11
SMK1YPR054W YAP3P38749 330 aa8.09□□□□□ -1.11
SMK1YPR054W RSC30P38781 883 aa8.09□□□□□ -1.11
SMK1YPR054W RAD59Q12223 238 aa8.09□□□□□ -1.11
SMK1YPR054W PDR11P40550 1411 aa8.09□□□□□ -1.11
SMK1YPR054W MOD5P07884 428 aa8.08□□□□□ -1.12
SMK1YPR054W SSA2P10592 639 aaKnown RBP8.08□□□□□ -1.12
SMK1YPR054W BUD27P43573 796 aaKnown RBP RIP-Chip data8.08□□□□□ -1.12not detected
SMK1YPR054W POL32P47110 350 aa8.08□□□□□ -1.12
SMK1YPR054W MLP1Q02455 1875 aaKnown RBP8.07□□□□□ -1.12
SMK1YPR054W PDC1P06169 563 aaKnown RBP8.07□□□□□ -1.12
SMK1YPR054W YEF3P16521 1044 aaKnown RBP8.07□□□□□ -1.12
SMK1YPR054W YIL092WP40497 633 aa8.07□□□□□ -1.12
SMK1YPR054W SMC3P47037 1230 aa8.07□□□□□ -1.12
SMK1YPR054W ITC1P53125 1264 aa8.07□□□□□ -1.12
SMK1YPR054W CWC22P53333 577 aaKnown RBP8.07□□□□□ -1.12
SMK1YPR054W RIX1P38883 763 aaPredicted RBP8.06□□□□□ -1.12
SMK1YPR054W RAD26P40352 1085 aa8.06□□□□□ -1.12
SMK1YPR054W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.06□□□□□ -1.12not detected
SMK1YPR054W KXD1P53158 218 aa8.06□□□□□ -1.12
SMK1YPR054W TFB3Q03290 321 aa8.06□□□□□ -1.12
SMK1YPR054W NUP192P47054 1683 aa8.05□□□□□ -1.12
SMK1YPR054W SPE2P21182 396 aa8.05□□□□□ -1.12
SMK1YPR054W SAP155P43612 1002 aa8.05□□□□□ -1.12
SMK1YPR054W PIL1P53252 339 aaKnown RBP8.05□□□□□ -1.12
SMK1YPR054W MAK10Q02197 733 aa8.05□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 67.5 ms