RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C PSH1Q12161 406 aa3.98□□□□□ -1.77
RPA135YPR010C SSA1P10591 642 aaKnown RBP3.97□□□□□ -1.77
RPA135YPR010C IMP2'P32351 346 aa3.97□□□□□ -1.77
RPA135YPR010C DSF2P38213 736 aa3.97□□□□□ -1.77
RPA135YPR010C HXT17P53631 564 aa3.97□□□□□ -1.77
RPA135YPR010C NOP53Q12080 455 aaKnown RBP3.97□□□□□ -1.77
RPA135YPR010C SNU66Q12420 587 aaPredicted RBP3.97□□□□□ -1.77
RPA135YPR010C STM1P39015 273 aaKnown RBP3.97□□□□□ -1.77
RPA135YPR010C HXT13P39924 564 aa3.97□□□□□ -1.77
RPA135YPR010C RLP24Q07915 199 aaKnown RBP3.97□□□□□ -1.77
RPA135YPR010C CAF20P12962 161 aaKnown RBP3.97□□□□□ -1.77
RPA135YPR010C CWH41P53008 833 aa3.97□□□□□ -1.77
RPA135YPR010C INP54Q08227 384 aaKnown RBP3.97□□□□□ -1.77
RPA135YPR010C YPP1P46951 817 aa3.96□□□□□ -1.77
RPA135YPR010C TSR3Q12094 313 aaKnown RBP3.96□□□□□ -1.77
RPA135YPR010C DNF3Q12674 1656 aa3.96□□□□□ -1.78
RPA135YPR010C SUP35P05453 685 aaKnown RBP3.96□□□□□ -1.78
RPA135YPR010C DLD1P32891 587 aa3.96□□□□□ -1.78
RPA135YPR010C HXT10P43581 546 aa3.96□□□□□ -1.78
RPA135YPR010C ITC1P53125 1264 aa3.96□□□□□ -1.78
RPA135YPR010C ADE6P38972 1358 aaKnown RBP3.96□□□□□ -1.78
RPA135YPR010C RPL17AP05740 184 aaKnown RBP3.96□□□□□ -1.78
RPA135YPR010C RRN6P32786 894 aa3.96□□□□□ -1.78
RPA135YPR010C RPL17BP46990 184 aaKnown RBP3.96□□□□□ -1.78
RPA135YPR010C YOL057WQ08225 711 aa3.96□□□□□ -1.78
RPA135YPR010C RAD50P12753 1312 aa3.96□□□□□ -1.78
RPA135YPR010C VID28P40547 921 aa3.95□□□□□ -1.78
RPA135YPR010C DOT5P40553 215 aa3.95□□□□□ -1.78
RPA135YPR010C LPD1P09624 499 aaKnown RBP3.95□□□□□ -1.78
RPA135YPR010C PCT1P13259 424 aa3.95□□□□□ -1.78
RPA135YPR010C RRP8P38961 392 aaKnown RBP3.95□□□□□ -1.78
RPA135YPR010C YMR147WP40218 223 aaKnown RBP3.95□□□□□ -1.78
RPA135YPR010C GSM1P42950 618 aa3.95□□□□□ -1.78
RPA135YPR010C DNM1P54861 757 aa3.95□□□□□ -1.78
RPA135YPR010C COG8Q04632 607 aa3.95□□□□□ -1.78
RPA135YPR010C PDR1P12383 1068 aa3.95□□□□□ -1.78
RPA135YPR010C SRS2P12954 1174 aa3.95□□□□□ -1.78
RPA135YPR010C CLC1P17891 233 aa3.95□□□□□ -1.78
RPA135YPR010C USO1P25386 1790 aa3.95□□□□□ -1.78
RPA135YPR010C NGR1P32831 672 aaKnown RBP3.95□□□□□ -1.78
RPA135YPR010C PRP43P53131 767 aaKnown RBP3.95□□□□□ -1.78
RPA135YPR010C VPS20Q04272 221 aa3.95□□□□□ -1.78
RPA135YPR010C PGA3Q12746 312 aaKnown RBP3.95□□□□□ -1.78
RPA135YPR010C NUP145P49687 1317 aa3.94□□□□□ -1.78
RPA135YPR010C HCA4P20448 770 aaKnown RBP3.94□□□□□ -1.78
RPA135YPR010C GLN1P32288 370 aaKnown RBP3.94□□□□□ -1.78
RPA135YPR010C MFT1P33441 392 aaKnown RBP3.94□□□□□ -1.78
RPA135YPR010C RPT3P33298 428 aaKnown RBP3.94□□□□□ -1.78
RPA135YPR010C AI2P03876 854 aa3.94□□□□□ -1.78
RPA135YPR010C IME2P32581 645 aa3.94□□□□□ -1.78
RPA135YPR010C VPS24P36095 224 aaKnown RBP3.94□□□□□ -1.78
RPA135YPR010C CIC1P38779 376 aaKnown RBP3.94□□□□□ -1.78
RPA135YPR010C CST6P40535 587 aa3.94□□□□□ -1.78
RPA135YPR010C MGA2P40578 1113 aa3.94□□□□□ -1.78
RPA135YPR010C RPS0BP46654 252 aaKnown RBP3.94□□□□□ -1.78
RPA135YPR010C ECM16Q04217 1267 aaKnown RBP3.94□□□□□ -1.78
RPA135YPR010C PRI1P10363 409 aa3.93□□□□□ -1.78
RPA135YPR010C SPB4P25808 606 aaPredicted RBP3.93□□□□□ -1.78
RPA135YPR010C RAM2P29703 316 aa3.93□□□□□ -1.78
RPA135YPR010C DID4P36108 232 aa3.93□□□□□ -1.78
RPA135YPR010C ARL1P38116 183 aaKnown RBP3.93□□□□□ -1.78
RPA135YPR010C BOI2P39969 1040 aa3.93□□□□□ -1.78
RPA135YPR010C BBC1P47068 1157 aa3.93□□□□□ -1.78
RPA135YPR010C SSP2Q08646 371 aa3.93□□□□□ -1.78
RPA135YPR010C HAP1P0CE41 1502 aa3.93□□□□□ -1.78
RPA135YPR010C GLC3P32775 704 aa3.93□□□□□ -1.78
RPA135YPR010C YIL055CP40523 627 aaKnown RBP3.93□□□□□ -1.78
RPA135YPR010C YIR042CP40586 236 aa3.93□□□□□ -1.78
RPA135YPR010C RTS3P53289 263 aa3.93□□□□□ -1.78
RPA135YPR010C CTF4Q01454 927 aa3.93□□□□□ -1.78
RPA135YPR010C SRC1Q03707 834 aa3.93□□□□□ -1.78
RPA135YPR010C SAS4Q04003 481 aa3.93□□□□□ -1.78
RPA135YPR010C YAH1Q12184 172 aaKnown RBP3.93□□□□□ -1.78
RPA135YPR010C BIK1P11709 440 aa3.92□□□□□ -1.78
RPA135YPR010C EBP2P36049 427 aaKnown RBP3.92□□□□□ -1.78
RPA135YPR010C UBP12P39538 1254 aa3.92□□□□□ -1.78
RPA135YPR010C OSW7P43611 510 aa3.92□□□□□ -1.78
RPA135YPR010C LYS4P49367 693 aaPredicted RBP3.92□□□□□ -1.78
RPA135YPR010C YNL193WP53870 558 aa3.92□□□□□ -1.78
RPA135YPR010C VPS72Q03388 795 aa3.92□□□□□ -1.78
RPA135YPR010C PKC1P24583 1151 aa3.92□□□□□ -1.78
RPA135YPR010C OPY1P38271 328 aa3.92□□□□□ -1.78
RPA135YPR010C ENP2P48234 707 aaKnown RBP3.92□□□□□ -1.78
RPA135YPR010C PIB2P53191 635 aa3.92□□□□□ -1.78
RPA135YPR010C YNR021WP53723 404 aaKnown RBP3.92□□□□□ -1.78
RPA135YPR010C UBX5Q06682 500 aa3.92□□□□□ -1.78
RPA135YPR010C IRC3Q06683 689 aa3.92□□□□□ -1.78
RPA135YPR010C MSB4Q12317 492 aa3.92□□□□□ -1.78
RPA135YPR010C NOT3P06102 836 aaKnown RBP3.91□□□□□ -1.78
RPA135YPR010C RPS19AP07280 144 aaKnown RBP3.91□□□□□ -1.78
RPA135YPR010C RPS19BP07281 144 aaPredicted RBP3.91□□□□□ -1.78
RPA135YPR010C NUP42P49686 430 aaKnown RBP3.91□□□□□ -1.78
RPA135YPR010C FOX2Q02207 900 aaKnown RBP3.91□□□□□ -1.78
RPA135YPR010C VPS70P47161 811 aa3.91□□□□□ -1.78
RPA135YPR010C SUB1P54000 292 aaKnown RBP3.91□□□□□ -1.78
RPA135YPR010C GCR2Q01722 534 aa3.91□□□□□ -1.78
RPA135YPR010C RPN7Q06103 429 aaKnown RBP3.91□□□□□ -1.78
RPA135YPR010C SSK22P25390 1331 aaPredicted RBP3.91□□□□□ -1.78
RPA135YPR010C UBP1P25037 809 aa3.91□□□□□ -1.78
RPA135YPR010C ECM21P38167 1117 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms