RNA–Protein interactions for RNA: YPL234C

VMA11, Transcript of Vacuolar ATPase V0 domain subunit c', yeast

Gene VMA11, Length 495 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA11	YPL234C	UBP12	P39538	1254 aa		10.2	□□□□□ -0.78
VMA11	YPL234C	HXT17	P53631	564 aa		10.2	□□□□□ -0.78
VMA11	YPL234C	COG8	Q04632	607 aa		10.2	□□□□□ -0.78
VMA11	YPL234C	TEA1	P47988	759 aa		10.19	□□□□□ -0.78
VMA11	YPL234C	SSP2	Q08646	371 aa		10.19	□□□□□ -0.78
VMA11	YPL234C	NOP53	Q12080	455 aa	Known RBP	10.19	□□□□□ -0.78
VMA11	YPL234C	LPD1	P09624	499 aa	Known RBP	10.18	□□□□□ -0.78
VMA11	YPL234C	UBP1	P25037	809 aa		10.18	□□□□□ -0.78
VMA11	YPL234C	ECM21	P38167	1117 aa	Known RBP	10.18	□□□□□ -0.78
VMA11	YPL234C	RPN11	P43588	306 aa	Known RBP	10.17	□□□□□ -0.78
VMA11	YPL234C	MLC1	P53141	149 aa		10.17	□□□□□ -0.78
VMA11	YPL234C	FPR4	Q06205	392 aa	Predicted RBP	10.17	□□□□□ -0.78
VMA11	YPL234C	NOT3	P06102	836 aa	Known RBP	10.16	□□□□□ -0.78
VMA11	YPL234C	RMD1	Q03441	430 aa		10.16	□□□□□ -0.78
VMA11	YPL234C	VPS20	Q04272	221 aa		10.16	□□□□□ -0.78
VMA11	YPL234C	BRE1	Q07457	700 aa	Known RBP	10.16	□□□□□ -0.78
VMA11	YPL234C	FAS2	P19097	1887 aa	Known RBP	10.15	□□□□□ -0.78
VMA11	YPL234C	SET1	P38827	1080 aa	Known RBP	10.15	□□□□□ -0.78
VMA11	YPL234C	NPA3	P47122	385 aa		10.15	□□□□□ -0.78
VMA11	YPL234C	MDG1	P53885	366 aa		10.15	□□□□□ -0.78
VMA11	YPL234C	HAP5	Q02516	242 aa		10.15	□□□□□ -0.78
VMA11	YPL234C	PKH1	Q03407	766 aa		10.15	□□□□□ -0.78
VMA11	YPL234C	APL2	P36000	726 aa	Predicted RBP	10.14	□□□□□ -0.79
VMA11	YPL234C	KRI1	P42846	591 aa	Known RBP	10.14	□□□□□ -0.79
VMA11	YPL234C	YLR271W	Q06152	274 aa		10.14	□□□□□ -0.79
VMA11	YPL234C	RIM20	Q12033	661 aa		10.14	□□□□□ -0.79
VMA11	YPL234C	TRL1	P09880	827 aa	Known RBP	10.13	□□□□□ -0.79
VMA11	YPL234C	BDH2	P39713	417 aa		10.13	□□□□□ -0.79
VMA11	YPL234C	SUP35	P05453	685 aa	Known RBP	10.12	□□□□□ -0.79
VMA11	YPL234C	BIK1	P11709	440 aa		10.12	□□□□□ -0.79
VMA11	YPL234C	YBL086C	P38177	466 aa		10.12	□□□□□ -0.79
VMA11	YPL234C	YGL242C	P53066	181 aa		10.12	□□□□□ -0.79
VMA11	YPL234C	YGL081W	P53156	320 aa		10.12	□□□□□ -0.79
VMA11	YPL234C	HST1	P53685	503 aa		10.12	□□□□□ -0.79
VMA11	YPL234C	PSH1	Q12161	406 aa		10.12	□□□□□ -0.79
VMA11	YPL234C	GRX1	P25373	110 aa	Known RBP	10.11	□□□□□ -0.79
VMA11	YPL234C	AAP1	P37898	856 aa	Known RBP	10.11	□□□□□ -0.79
VMA11	YPL234C	DOT5	P40553	215 aa		10.11	□□□□□ -0.79
VMA11	YPL234C	YPR204W	Q08995	1032 aa		10.11	□□□□□ -0.79
VMA11	YPL234C	TPM1	P17536	199 aa	Known RBP	10.1	□□□□□ -0.79
VMA11	YPL234C	KNS1	P32350	737 aa	Predicted RBP	10.1	□□□□□ -0.79
VMA11	YPL234C	MRPS35	P53292	345 aa		10.1	□□□□□ -0.79
VMA11	YPL234C	PHM7	Q12252	991 aa		10.1	□□□□□ -0.79
VMA11	YPL234C	MTC5	Q03897	1148 aa		10.09	□□□□□ -0.79
VMA11	YPL234C	TUM1	Q08686	304 aa	Known RBP	10.09	□□□□□ -0.79
VMA11	YPL234C	COB	P00163	385 aa		10.08	□□□□□ -0.8
VMA11	YPL234C	KEX1	P09620	729 aa		10.08	□□□□□ -0.8
VMA11	YPL234C	ARG8	P18544	423 aa		10.08	□□□□□ -0.8
VMA11	YPL234C	STM1	P39015	273 aa	Known RBP	10.08	□□□□□ -0.8
VMA11	YPL234C	YJL181W	P46987	611 aa		10.08	□□□□□ -0.8
VMA11	YPL234C	ALO1	P54783	526 aa	Known RBP	10.08	□□□□□ -0.8
VMA11	YPL234C	HRQ1	Q05549	1077 aa		10.08	□□□□□ -0.8
VMA11	YPL234C	KTR1	P27810	393 aa	Known RBP	10.07	□□□□□ -0.8
VMA11	YPL234C	SLA1	P32790	1244 aa		10.07	□□□□□ -0.8
VMA11	YPL234C	KTR3	P38130	404 aa	Predicted RBP	10.07	□□□□□ -0.8
VMA11	YPL234C	AIM9	P40053	627 aa	Known RBP	10.07	□□□□□ -0.8
VMA11	YPL234C	HYR1	P40581	163 aa	Known RBP	10.07	□□□□□ -0.8
VMA11	YPL234C	SSK22	P25390	1331 aa	Predicted RBP	10.07	□□□□□ -0.8
VMA11	YPL234C	RSM25	P40496	264 aa		10.06	□□□□□ -0.8
VMA11	YPL234C	SPO22	P40511	975 aa		10.06	□□□□□ -0.8
VMA11	YPL234C	CIR1	P42940	261 aa		10.06	□□□□□ -0.8
VMA11	YPL234C	HXT10	P43581	546 aa		10.06	□□□□□ -0.8
VMA11	YPL234C	LYS4	P49367	693 aa	Predicted RBP	10.06	□□□□□ -0.8
VMA11	YPL234C	FOX2	Q02207	900 aa	Known RBP	10.06	□□□□□ -0.8
VMA11	YPL234C	GYP5	Q12344	894 aa		10.06	□□□□□ -0.8
VMA11	YPL234C	RPL19A	P0CX82	189 aa	Known RBP	10.05	□□□□□ -0.8
VMA11	YPL234C	RPL19B	P0CX83	189 aa	Predicted RBP	10.05	□□□□□ -0.8
VMA11	YPL234C	RVS167	P39743	482 aa	Known RBP	10.05	□□□□□ -0.8
VMA11	YPL234C	PIL1	P53252	339 aa	Known RBP	10.05	□□□□□ -0.8
VMA11	YPL234C	FCP1	Q03254	732 aa		10.05	□□□□□ -0.8
VMA11	YPL234C	LCD1	Q04377	747 aa		10.05	□□□□□ -0.8
VMA11	YPL234C	SNU66	Q12420	587 aa	Predicted RBP	10.05	□□□□□ -0.8
VMA11	YPL234C	AIM44	Q99299	758 aa		10.05	□□□□□ -0.8
VMA11	YPL234C	RPN12	P32496	274 aa		10.04	□□□□□ -0.8
VMA11	YPL234C	UGA2	P38067	497 aa		10.04	□□□□□ -0.8
VMA11	YPL234C	PEX14	P53112	341 aa		10.04	□□□□□ -0.8
VMA11	YPL234C	RSC1	P53236	928 aa		10.04	□□□□□ -0.8
VMA11	YPL234C	MNN4	P36044	1178 aa		10.03	□□□□□ -0.8
VMA11	YPL234C	YKR075C	P36155	307 aa		10.03	□□□□□ -0.8
VMA11	YPL234C	OSH3	P38713	996 aa	Known RBP	10.03	□□□□□ -0.8
VMA11	YPL234C	NPR2	P39923	615 aa		10.03	□□□□□ -0.8
VMA11	YPL234C	YGL082W	P53155	381 aa		10.03	□□□□□ -0.8
VMA11	YPL234C	LAM6	Q08001	693 aa		10.03	□□□□□ -0.8
VMA11	YPL234C	SAC3	P46674	1301 aa		10.03	□□□□□ -0.8
VMA11	YPL234C	DCD1	P06773	312 aa		10.02	□□□□□ -0.81
VMA11	YPL234C	SER1	P33330	395 aa	Known RBP	10.02	□□□□□ -0.81
VMA11	YPL234C	TTI1	P36097	1038 aa		10.02	□□□□□ -0.81
VMA11	YPL234C	RKM3	P38222	552 aa		10.02	□□□□□ -0.81
VMA11	YPL234C	PBY1	P38254	753 aa		10.02	□□□□□ -0.81
VMA11	YPL234C	PEX19	Q07418	342 aa		10.02	□□□□□ -0.81
VMA11	YPL234C	TSR3	Q12094	313 aa	Known RBP	10.02	□□□□□ -0.81
VMA11	YPL234C	EPS1	P40557	701 aa		10.01	□□□□□ -0.81
VMA11	YPL234C	PRP40	P33203	583 aa	Known RBP	10	□□□□□ -0.81
VMA11	YPL234C	PRX1	P34227	261 aa	Known RBP	10	□□□□□ -0.81
VMA11	YPL234C	CAB3	P36076	571 aa		10	□□□□□ -0.81
VMA11	YPL234C	PIB2	P53191	635 aa		10	□□□□□ -0.81
VMA11	YPL234C	ARP5	P53946	755 aa		10	□□□□□ -0.81
VMA11	YPL234C	SSA2	P10592	639 aa	Known RBP	9.99	□□□□□ -0.81
VMA11	YPL234C	SEC18	P18759	758 aa	Known RBP	9.99	□□□□□ -0.81
VMA11	YPL234C	ALD2	P47771	506 aa		9.99	□□□□□ -0.81

Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms