RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C DAL1P32375 460 aa7.23□□□□□ -1.25
SNF8YPL002C UTR2P32623 467 aa7.22□□□□□ -1.25
SNF8YPL002C DAT1P13483 248 aaKnown RBP7.21□□□□□ -1.26
SNF8YPL002C SOH1P38633 127 aa7.21□□□□□ -1.26
SNF8YPL002C UFD4P33202 1483 aa7.2□□□□□ -1.26
SNF8YPL002C SSN3P39073 555 aa7.19□□□□□ -1.26
SNF8YPL002C YPP1P46951 817 aa7.19□□□□□ -1.26
SNF8YPL002C YJL007CP47080 104 aa7.19□□□□□ -1.26
SNF8YPL002C SIN3P22579 1536 aa7.18□□□□□ -1.26
SNF8YPL002C SLA1P32790 1244 aa7.18□□□□□ -1.26
SNF8YPL002C RIM21P48565 533 aa7.18□□□□□ -1.26
SNF8YPL002C MET5P47169 1442 aa7.18□□□□□ -1.26
SNF8YPL002C UTP7P40055 554 aaKnown RBP7.17□□□□□ -1.26
SNF8YPL002C MSN5P52918 1224 aa7.17□□□□□ -1.26
SNF8YPL002C UTP13Q05946 817 aaKnown RBP7.17□□□□□ -1.26
SNF8YPL002C DPH6Q12429 685 aa7.17□□□□□ -1.26
SNF8YPL002C TY1A-DR3Q12441 440 aa7.17□□□□□ -1.26
SNF8YPL002C RDS2P19541 446 aaKnown RBP7.16□□□□□ -1.26
SNF8YPL002C TBS1P38114 1094 aa7.16□□□□□ -1.26
SNF8YPL002C ATG3P40344 310 aa7.16□□□□□ -1.26
SNF8YPL002C CUZ1P53899 274 aa7.16□□□□□ -1.26
SNF8YPL002C HDA3Q06623 655 aa7.16□□□□□ -1.26
SNF8YPL002C SLX8P40072 274 aa7.15□□□□□ -1.26
SNF8YPL002C JJJ3P47138 172 aa7.15□□□□□ -1.26
SNF8YPL002C LYS5P50113 272 aa7.15□□□□□ -1.26
SNF8YPL002C LTE1P07866 1435 aa7.15□□□□□ -1.27
SNF8YPL002C SSN2P38931 1420 aa7.15□□□□□ -1.27
SNF8YPL002C UBP15P50101 1230 aa7.14□□□□□ -1.27
SNF8YPL002C ESP1Q03018 1630 aa7.14□□□□□ -1.27
SNF8YPL002C YPR204WQ08995 1032 aa7.13□□□□□ -1.27
SNF8YPL002C BIM1P40013 344 aa7.12□□□□□ -1.27
SNF8YPL002C SUM1P46676 1062 aa7.12□□□□□ -1.27
SNF8YPL002C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
SNF8YPL002C MYO2P19524 1574 aaKnown RBP7.12□□□□□ -1.27
SNF8YPL002C ATG32P40458 529 aa7.11□□□□□ -1.27
SNF8YPL002C ESC1Q03661 1658 aaKnown RBP7.11□□□□□ -1.27
SNF8YPL002C AHP1P38013 176 aaKnown RBP7.1□□□□□ -1.27
SNF8YPL002C MRX10Q05648 414 aa7.1□□□□□ -1.27
SNF8YPL002C CHD1P32657 1468 aa7.1□□□□□ -1.27
SNF8YPL002C CDC25P04821 1589 aa7.09□□□□□ -1.27
SNF8YPL002C ENO1P00924 437 aaKnown RBP7.08□□□□□ -1.28
SNF8YPL002C TIF1P10081 395 aaKnown RBP7.08□□□□□ -1.28
SNF8YPL002C DIT1P21623 536 aa7.08□□□□□ -1.28
SNF8YPL002C SHM1P37292 490 aaPredicted RBP7.08□□□□□ -1.28
SNF8YPL002C CEM1P39525 442 aa7.08□□□□□ -1.28
SNF8YPL002C ALA1P40825 983 aaKnown RBP7.08□□□□□ -1.28
SNF8YPL002C JJJ2P46997 583 aa7.08□□□□□ -1.28
SNF8YPL002C MTC5Q03897 1148 aa7.08□□□□□ -1.28
SNF8YPL002C RPA190P10964 1664 aaKnown RBP7.07□□□□□ -1.28
SNF8YPL002C YMR265CQ03508 461 aaKnown RBP7.07□□□□□ -1.28
SNF8YPL002C SWI5P08153 709 aa7.06□□□□□ -1.28
SNF8YPL002C MDJ1P35191 511 aa7.06□□□□□ -1.28
SNF8YPL002C SYT1Q06836 1226 aa7.06□□□□□ -1.28
SNF8YPL002C GEA2P39993 1459 aaKnown RBP7.05□□□□□ -1.28
SNF8YPL002C SCC2Q04002 1493 aa7.05□□□□□ -1.28
SNF8YPL002C DNF1P32660 1571 aa7.05□□□□□ -1.28
SNF8YPL002C IRE1P32361 1115 aa7.05□□□□□ -1.28
SNF8YPL002C AIM9P40053 627 aaKnown RBP7.05□□□□□ -1.28
SNF8YPL002C KRE33P53914 1056 aaKnown RBP7.05□□□□□ -1.28
SNF8YPL002C YPQ2Q06328 317 aa7.05□□□□□ -1.28
SNF8YPL002C BNI1P41832 1953 aa7.05□□□□□ -1.28
SNF8YPL002C RTG2P32608 588 aaKnown RBP7.04□□□□□ -1.28
SNF8YPL002C ICP55P40051 511 aa7.04□□□□□ -1.28
SNF8YPL002C YPK9Q12697 1472 aa7.04□□□□□ -1.28
SNF8YPL002C RKR1Q04781 1562 aa7.03□□□□□ -1.28
SNF8YPL002C ADE12P80210 433 aaKnown RBP7.03□□□□□ -1.28
SNF8YPL002C PAN1P32521 1480 aa7.03□□□□□ -1.28
SNF8YPL002C PSH1Q12161 406 aa7.02□□□□□ -1.29
SNF8YPL002C YDR461C-AQ2V2P7 80 aa7.02□□□□□ -1.29
SNF8YPL002C RPO31P04051 1460 aa7.01□□□□□ -1.29
SNF8YPL002C RPS6AP0CX37 236 aaKnown RBP7.01□□□□□ -1.29
SNF8YPL002C RPS6BP0CX38 236 aaPredicted RBP7.01□□□□□ -1.29
SNF8YPL002C PEP12P32854 288 aa7.01□□□□□ -1.29
SNF8YPL002C RPL34BP40525 121 aaKnown RBP7.01□□□□□ -1.29
SNF8YPL002C HGH1P48362 394 aaKnown RBP7.01□□□□□ -1.29
SNF8YPL002C RPS31P05759 152 aaKnown RBP7□□□□□ -1.29
SNF8YPL002C PDC6P26263 563 aaKnown RBP7□□□□□ -1.29
SNF8YPL002C YFL066CP43538 392 aa7□□□□□ -1.29
SNF8YPL002C NSG2P53898 299 aa7□□□□□ -1.29
SNF8YPL002C AI1P03875 834 aa6.99□□□□□ -1.29
SNF8YPL002C PDI1P17967 522 aaKnown RBP6.99□□□□□ -1.29
SNF8YPL002C THI72Q08579 599 aa6.99□□□□□ -1.29
SNF8YPL002C PUS1Q12211 544 aaKnown RBP6.99□□□□□ -1.29
SNF8YPL002C PHM7Q12252 991 aa6.99□□□□□ -1.29
SNF8YPL002C TY2B-LR1P0C2J3 1770 aa6.99□□□□□ -1.29
SNF8YPL002C TY2B-FP0CX63 1770 aa6.99□□□□□ -1.29
SNF8YPL002C TY2B-GR2P0CX64 1770 aa6.99□□□□□ -1.29
SNF8YPL002C TY2B-CP25384 1770 aa6.99□□□□□ -1.29
SNF8YPL002C TY2B-DR2Q03494 1770 aa6.99□□□□□ -1.29
SNF8YPL002C TY1B-DR1Q03855 1755 aa6.99□□□□□ -1.29
SNF8YPL002C TY2B-DR3Q07791 1770 aaKnown RBP6.99□□□□□ -1.29
SNF8YPL002C TY2B-OR1Q12113 1770 aa6.99□□□□□ -1.29
SNF8YPL002C TY1B-BRQ12193 1756 aa6.99□□□□□ -1.29
SNF8YPL002C TY1B-GR3Q12316 1755 aa6.99□□□□□ -1.29
SNF8YPL002C TY2B-DR1Q12472 1770 aa6.99□□□□□ -1.29
SNF8YPL002C TY2B-OR2Q12501 1770 aa6.99□□□□□ -1.29
SNF8YPL002C TY1B-ORQ92393 1755 aa6.99□□□□□ -1.29
SNF8YPL002C MMS1Q06211 1407 aa6.99□□□□□ -1.29
SNF8YPL002C NTH2P35172 780 aa6.98□□□□□ -1.29
SNF8YPL002C LEO1P38439 464 aa6.98□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms