RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C RDS2P19541 446 aaKnown RBP5.73□□□□□ -1.49
RPA43YOR340C SSA4P22202 642 aaKnown RBP5.73□□□□□ -1.49
RPA43YOR340C FBP26P32604 452 aa5.73□□□□□ -1.49
RPA43YOR340C SOH1P38633 127 aa5.73□□□□□ -1.49
RPA43YOR340C STE6P12866 1290 aa5.72□□□□□ -1.49
RPA43YOR340C DLD1P32891 587 aa5.72□□□□□ -1.49
RPA43YOR340C BDS1Q08347 646 aa5.72□□□□□ -1.49
RPA43YOR340C ESP1Q03018 1630 aa5.72□□□□□ -1.49
RPA43YOR340C KTR7P40504 517 aa5.71□□□□□ -1.5
RPA43YOR340C APL6P46682 809 aa5.71□□□□□ -1.5
RPA43YOR340C ISU1Q03020 165 aa5.71□□□□□ -1.5
RPA43YOR340C UTP13Q05946 817 aaKnown RBP5.71□□□□□ -1.5
RPA43YOR340C ISR1Q06098 443 aaKnown RBP5.71□□□□□ -1.5
RPA43YOR340C DPH6Q12429 685 aa5.7□□□□□ -1.5
RPA43YOR340C PEP12P32854 288 aa5.69□□□□□ -1.5
RPA43YOR340C ROG3P43602 733 aa5.69□□□□□ -1.5
RPA43YOR340C TY1A-MR1Q04215 440 aa5.69□□□□□ -1.5
RPA43YOR340C TCB1Q12466 1186 aa5.69□□□□□ -1.5
RPA43YOR340C OSH7P38755 437 aa5.68□□□□□ -1.5
RPA43YOR340C SKI3P17883 1432 aaKnown RBP5.67□□□□□ -1.5
RPA43YOR340C CCP1P00431 361 aa5.67□□□□□ -1.5
RPA43YOR340C TGL4P36165 910 aa5.67□□□□□ -1.5
RPA43YOR340C HAL5P38970 855 aaKnown RBP5.67□□□□□ -1.5
RPA43YOR340C BPT1P14772 1559 aa5.67□□□□□ -1.5
RPA43YOR340C ICP55P40051 511 aa5.66□□□□□ -1.5
RPA43YOR340C SUB2Q07478 446 aaKnown RBP5.66□□□□□ -1.5
RPA43YOR340C RPP2BP02400 110 aaKnown RBP5.65□□□□□ -1.5
RPA43YOR340C LYS5P50113 272 aa5.65□□□□□ -1.5
RPA43YOR340C NRD1P53617 575 aaKnown RBP RIP-Chip data5.65□□□□□ -1.5not detected
RPA43YOR340C UTR2P32623 467 aa5.64□□□□□ -1.51
RPA43YOR340C ECM23Q02710 187 aa5.64□□□□□ -1.51
RPA43YOR340C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
RPA43YOR340C GAL2P13181 574 aa5.63□□□□□ -1.51
RPA43YOR340C DAT1P13483 248 aaKnown RBP5.63□□□□□ -1.51
RPA43YOR340C PUP1P25043 261 aa5.63□□□□□ -1.51
RPA43YOR340C PHO87P25360 923 aa5.63□□□□□ -1.51
RPA43YOR340C YFL034WP43564 1073 aa5.63□□□□□ -1.51
RPA43YOR340C VTC4P47075 721 aa5.63□□□□□ -1.51
RPA43YOR340C JJJ3P47138 172 aa5.63□□□□□ -1.51
RPA43YOR340C HDA3Q06623 655 aa5.63□□□□□ -1.51
RPA43YOR340C WTM2Q12206 467 aa5.63□□□□□ -1.51
RPA43YOR340C SPT2P06843 333 aaPredicted RBP5.62□□□□□ -1.51
RPA43YOR340C TBS1P38114 1094 aa5.62□□□□□ -1.51
RPA43YOR340C AIM9P40053 627 aaKnown RBP5.62□□□□□ -1.51
RPA43YOR340C LSB3P43603 459 aaKnown RBP5.62□□□□□ -1.51
RPA43YOR340C TY2B-LR1P0C2J3 1770 aa5.61□□□□□ -1.51
RPA43YOR340C TY2B-FP0CX63 1770 aa5.61□□□□□ -1.51
RPA43YOR340C TY2B-GR2P0CX64 1770 aa5.61□□□□□ -1.51
RPA43YOR340C SSA1P10591 642 aaKnown RBP5.61□□□□□ -1.51
RPA43YOR340C HAP4P14064 554 aa5.61□□□□□ -1.51
RPA43YOR340C PDI1P17967 522 aaKnown RBP5.61□□□□□ -1.51
RPA43YOR340C TY2B-CP25384 1770 aa5.61□□□□□ -1.51
RPA43YOR340C DLD3P39976 496 aaKnown RBP5.61□□□□□ -1.51
RPA43YOR340C TY2B-DR2Q03494 1770 aa5.61□□□□□ -1.51
RPA43YOR340C TY1B-DR1Q03855 1755 aa5.61□□□□□ -1.51
RPA43YOR340C TY2B-DR3Q07791 1770 aaKnown RBP5.61□□□□□ -1.51
RPA43YOR340C NOB1Q08444 459 aaKnown RBP5.61□□□□□ -1.51
RPA43YOR340C TY2B-OR1Q12113 1770 aa5.61□□□□□ -1.51
RPA43YOR340C PUS1Q12211 544 aaKnown RBP5.61□□□□□ -1.51
RPA43YOR340C PHM7Q12252 991 aa5.61□□□□□ -1.51
RPA43YOR340C TY2B-DR1Q12472 1770 aa5.61□□□□□ -1.51
RPA43YOR340C TY2B-OR2Q12501 1770 aa5.61□□□□□ -1.51
RPA43YOR340C TSC13Q99190 310 aa5.61□□□□□ -1.51
RPA43YOR340C CDC19P00549 500 aaKnown RBP5.6□□□□□ -1.51
RPA43YOR340C UBX7P38349 436 aa5.6□□□□□ -1.51
RPA43YOR340C ACS2P52910 683 aaKnown RBP5.6□□□□□ -1.51
RPA43YOR340C YML083CQ04526 418 aa5.6□□□□□ -1.51
RPA43YOR340C MYO2P19524 1574 aaKnown RBP5.59□□□□□ -1.51
RPA43YOR340C SCC2Q04002 1493 aa5.59□□□□□ -1.51
RPA43YOR340C YPK9Q12697 1472 aa5.59□□□□□ -1.51
RPA43YOR340C RPL34AP87262 121 aaPredicted RBP5.59□□□□□ -1.51
RPA43YOR340C GAS4Q08271 471 aa5.59□□□□□ -1.51
RPA43YOR340C UFD4P33202 1483 aa5.58□□□□□ -1.52
RPA43YOR340C NTH2P35172 780 aa5.58□□□□□ -1.52
RPA43YOR340C NAM8Q00539 523 aaKnown RBP5.58□□□□□ -1.52
RPA43YOR340C YCF1P39109 1515 aaKnown RBP5.58□□□□□ -1.52
RPA43YOR340C TY1B-BRQ12193 1756 aa5.57□□□□□ -1.52
RPA43YOR340C TY1B-GR3Q12316 1755 aa5.57□□□□□ -1.52
RPA43YOR340C TY1B-ORQ92393 1755 aa5.57□□□□□ -1.52
RPA43YOR340C DAL1P32375 460 aa5.57□□□□□ -1.52
RPA43YOR340C SSN3P39073 555 aa5.57□□□□□ -1.52
RPA43YOR340C UTP7P40055 554 aaKnown RBP5.57□□□□□ -1.52
RPA43YOR340C SLX8P40072 274 aa5.57□□□□□ -1.52
RPA43YOR340C SWI5P08153 709 aa5.56□□□□□ -1.52
RPA43YOR340C RPS6AP0CX37 236 aaKnown RBP5.56□□□□□ -1.52
RPA43YOR340C RPS6BP0CX38 236 aaPredicted RBP5.56□□□□□ -1.52
RPA43YOR340C GEF1P37020 779 aa5.56□□□□□ -1.52
RPA43YOR340C ROM1P53046 1155 aa5.56□□□□□ -1.52
RPA43YOR340C TY1B-DR3Q99231 1755 aa5.55□□□□□ -1.52
RPA43YOR340C CYT1P07143 309 aa5.55□□□□□ -1.52
RPA43YOR340C RPO31P04051 1460 aa5.55□□□□□ -1.52
RPA43YOR340C TY2B-BQ12491 1770 aa5.55□□□□□ -1.52
RPA43YOR340C VAN1P23642 535 aa5.54□□□□□ -1.52
RPA43YOR340C SLA1P32790 1244 aa5.54□□□□□ -1.52
RPA43YOR340C SUM1P46676 1062 aa5.54□□□□□ -1.52
RPA43YOR340C TY1A-DR3Q12441 440 aa5.54□□□□□ -1.52
RPA43YOR340C MSN5P52918 1224 aa5.53□□□□□ -1.52
RPA43YOR340C TY1B-HO13535 1793 aa5.52□□□□□ -1.53
RPA43YOR340C TY1B-DR5P0C2I2 1755 aa5.52□□□□□ -1.53
RPA43YOR340C TY1B-DR6P0C2I3 1755 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms