RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C VPS41P38959 992 aa4.72□□□□□ -1.65
VHS3YOR054C COQ8P27697 501 aa4.72□□□□□ -1.65
VHS3YOR054C GLC3P32775 704 aa4.72□□□□□ -1.65
VHS3YOR054C MFT1P33441 392 aaKnown RBP4.72□□□□□ -1.65
VHS3YOR054C RRP14P36080 434 aaKnown RBP4.72□□□□□ -1.65
VHS3YOR054C RRT14P40470 206 aa4.72□□□□□ -1.65
VHS3YOR054C YGL081WP53156 320 aa4.72□□□□□ -1.65
VHS3YOR054C VPS30Q02948 557 aa4.72□□□□□ -1.65
VHS3YOR054C RRP15Q06511 250 aaPredicted RBP4.72□□□□□ -1.65
VHS3YOR054C MDM38Q08179 573 aa4.72□□□□□ -1.65
VHS3YOR054C MAM3Q12296 706 aa4.72□□□□□ -1.65
VHS3YOR054C SEC39Q12745 709 aa4.72□□□□□ -1.65
VHS3YOR054C YIL092WP40497 633 aa4.71□□□□□ -1.66
VHS3YOR054C BDP1P46678 594 aa4.71□□□□□ -1.66
VHS3YOR054C MRX12P47084 519 aa4.71□□□□□ -1.66
VHS3YOR054C YMR1P47147 688 aaKnown RBP RIP-Chip data4.71□□□□□ -1.66not detected
VHS3YOR054C ERV41Q04651 352 aa4.71□□□□□ -1.66
VHS3YOR054C AIM7Q12156 149 aa4.71□□□□□ -1.66
VHS3YOR054C RAD3P06839 778 aa4.7□□□□□ -1.66
VHS3YOR054C MSH1P25846 959 aa4.7□□□□□ -1.66
VHS3YOR054C BDH2P39713 417 aa4.7□□□□□ -1.66
VHS3YOR054C KRE33P53914 1056 aaKnown RBP4.7□□□□□ -1.66
VHS3YOR054C ARP5P53946 755 aa4.7□□□□□ -1.66
VHS3YOR054C YNL050CP53952 270 aa4.7□□□□□ -1.66
VHS3YOR054C TIM50Q02776 476 aa4.7□□□□□ -1.66
VHS3YOR054C TLG2Q08144 397 aa4.7□□□□□ -1.66
VHS3YOR054C PUP2P32379 260 aa4.7□□□□□ -1.66
VHS3YOR054C SCT1P32784 759 aa4.7□□□□□ -1.66
VHS3YOR054C MNR2P35724 969 aa4.7□□□□□ -1.66
VHS3YOR054C TIF4632P39936 914 aaKnown RBP4.7□□□□□ -1.66
VHS3YOR054C NPA3P47122 385 aa4.7□□□□□ -1.66
VHS3YOR054C YNL035CP53962 389 aaKnown RBP4.7□□□□□ -1.66
VHS3YOR054C NUP145P49687 1317 aa4.7□□□□□ -1.66
VHS3YOR054C MLP1Q02455 1875 aaKnown RBP4.69□□□□□ -1.66
VHS3YOR054C TRK1P12685 1235 aa4.69□□□□□ -1.66
VHS3YOR054C ZUO1P32527 433 aaKnown RBP4.69□□□□□ -1.66
VHS3YOR054C MAP2P38174 421 aaKnown RBP4.69□□□□□ -1.66
VHS3YOR054C IES2P40154 320 aa4.69□□□□□ -1.66
VHS3YOR054C BUD27P43573 796 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
VHS3YOR054C RSC8P43609 557 aaKnown RBP4.69□□□□□ -1.66
VHS3YOR054C YNR029CP53729 429 aaKnown RBP4.69□□□□□ -1.66
VHS3YOR054C IMH1Q06704 911 aaKnown RBP4.69□□□□□ -1.66
VHS3YOR054C TAF5P38129 798 aa4.68□□□□□ -1.66
VHS3YOR054C REF2P42073 533 aaPredicted RBP4.68□□□□□ -1.66
VHS3YOR054C SAP155P43612 1002 aa4.68□□□□□ -1.66
VHS3YOR054C PRP31P49704 494 aaPredicted RBP4.68□□□□□ -1.66
VHS3YOR054C PUF6Q04373 656 aaKnown RBP4.68□□□□□ -1.66
VHS3YOR054C ENT1Q12518 454 aa4.68□□□□□ -1.66
VHS3YOR054C UBP1P25037 809 aa4.68□□□□□ -1.66
VHS3YOR054C MPE1P35728 441 aaKnown RBP4.68□□□□□ -1.66
VHS3YOR054C RSM25P40496 264 aa4.68□□□□□ -1.66
VHS3YOR054C SCY1P53009 804 aa4.68□□□□□ -1.66
VHS3YOR054C PXR1P53335 271 aaPredicted RBP4.68□□□□□ -1.66
VHS3YOR054C HST1P53685 503 aa4.68□□□□□ -1.66
VHS3YOR054C RIA1P53893 1110 aa4.68□□□□□ -1.66
VHS3YOR054C YVC1Q12324 675 aa4.68□□□□□ -1.66
VHS3YOR054C YKL068W-AQ3E826 78 aa4.68□□□□□ -1.66
VHS3YOR054C KRE5P22023 1365 aa4.68□□□□□ -1.66
VHS3YOR054C PSK1P31374 1356 aa4.68□□□□□ -1.66
VHS3YOR054C MRC1P25588 1096 aa4.67□□□□□ -1.66
VHS3YOR054C RPS0AP32905 252 aaKnown RBP4.67□□□□□ -1.66
VHS3YOR054C VPS29P38759 282 aa4.67□□□□□ -1.66
VHS3YOR054C YGL082WP53155 381 aa4.67□□□□□ -1.66
VHS3YOR054C ENV9Q08651 330 aa4.67□□□□□ -1.66
VHS3YOR054C KEX1P09620 729 aa4.67□□□□□ -1.66
VHS3YOR054C DIT2P21595 489 aa4.67□□□□□ -1.66
VHS3YOR054C DID4P36108 232 aa4.67□□□□□ -1.66
VHS3YOR054C MRPL10P36520 322 aa4.67□□□□□ -1.66
VHS3YOR054C VPS20Q04272 221 aa4.67□□□□□ -1.66
VHS3YOR054C YPL225WQ08971 146 aaKnown RBP4.67□□□□□ -1.66
VHS3YOR054C APC11Q12157 165 aa4.67□□□□□ -1.66
VHS3YOR054C TOP1P04786 769 aa4.66□□□□□ -1.66
VHS3YOR054C YEF3P16521 1044 aaKnown RBP4.66□□□□□ -1.66
VHS3YOR054C RPC82P32349 654 aa4.66□□□□□ -1.66
VHS3YOR054C DLD1P32891 587 aa4.66□□□□□ -1.66
VHS3YOR054C RIO2P40160 425 aaKnown RBP4.66□□□□□ -1.66
VHS3YOR054C NDC80P40460 691 aa4.66□□□□□ -1.66
VHS3YOR054C NUP42P49686 430 aaKnown RBP4.66□□□□□ -1.66
VHS3YOR054C CWH41P53008 833 aa4.66□□□□□ -1.66
VHS3YOR054C SSL2Q00578 843 aa4.66□□□□□ -1.66
VHS3YOR054C GYL1Q04322 720 aa4.66□□□□□ -1.66
VHS3YOR054C HRQ1Q05549 1077 aa4.66□□□□□ -1.66
VHS3YOR054C SLP1Q12232 587 aa4.66□□□□□ -1.66
VHS3YOR054C MSB4Q12317 492 aa4.66□□□□□ -1.66
VHS3YOR054C URB1P34241 1764 aaKnown RBP4.66□□□□□ -1.66
VHS3YOR054C AUS1Q08409 1394 aa4.65□□□□□ -1.66
VHS3YOR054C PET111P08468 800 aa4.65□□□□□ -1.66
VHS3YOR054C KAR3P17119 729 aa4.65□□□□□ -1.66
VHS3YOR054C HSP104P31539 908 aaKnown RBP4.65□□□□□ -1.66
VHS3YOR054C DPH5P32469 300 aaPredicted RBP4.65□□□□□ -1.66
VHS3YOR054C OLA1P38219 394 aaKnown RBP4.65□□□□□ -1.66
VHS3YOR054C GUA1P38625 525 aaKnown RBP4.65□□□□□ -1.66
VHS3YOR054C RFC1P38630 861 aaKnown RBP4.65□□□□□ -1.66
VHS3YOR054C GTT3P39996 337 aa4.65□□□□□ -1.66
VHS3YOR054C ALD3P54114 506 aa4.65□□□□□ -1.66
VHS3YOR054C DNM1P54861 757 aa4.65□□□□□ -1.66
VHS3YOR054C ORM2Q06144 216 aa4.65□□□□□ -1.66
VHS3YOR054C PEX19Q07418 342 aa4.65□□□□□ -1.66
VHS3YOR054C APL5Q08951 932 aaKnown RBP4.65□□□□□ -1.66
VHS3YOR054C SSA1P10591 642 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms