RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W VPS70P47161 811 aa3.43□□□□□ -1.86
CAF120YNL278W YNL050CP53952 270 aa3.43□□□□□ -1.86
CAF120YNL278W SUB1P54000 292 aaKnown RBP3.43□□□□□ -1.86
CAF120YNL278W DIT2P21595 489 aa3.42□□□□□ -1.86
CAF120YNL278W RCR1P38212 213 aa3.42□□□□□ -1.86
CAF120YNL278W YNR021WP53723 404 aaKnown RBP3.42□□□□□ -1.86
CAF120YNL278W PRP40P33203 583 aaKnown RBP3.42□□□□□ -1.86
CAF120YNL278W BCH2P36122 765 aa3.42□□□□□ -1.86
CAF120YNL278W AIM7Q12156 149 aa3.42□□□□□ -1.86
CAF120YNL278W PKC1P24583 1151 aa3.41□□□□□ -1.86
CAF120YNL278W BBC1P47068 1157 aa3.41□□□□□ -1.86
CAF120YNL278W DOS2P54858 310 aa3.41□□□□□ -1.86
CAF120YNL278W VPS72Q03388 795 aa3.41□□□□□ -1.86
CAF120YNL278W PDS5Q04264 1277 aa3.41□□□□□ -1.86
CAF120YNL278W DAL5P15365 543 aa3.41□□□□□ -1.86
CAF120YNL278W YNR029CP53729 429 aaKnown RBP3.41□□□□□ -1.86
CAF120YNL278W RLP24Q07915 199 aaKnown RBP3.41□□□□□ -1.86
CAF120YNL278W SPE2P21182 396 aa3.41□□□□□ -1.86
CAF120YNL278W YKL222CP35995 705 aa3.41□□□□□ -1.86
CAF120YNL278W YFL040WP43562 540 aa3.41□□□□□ -1.86
CAF120YNL278W RPN11P43588 306 aaKnown RBP3.41□□□□□ -1.86
CAF120YNL278W UBP10P53874 792 aaPredicted RBP3.41□□□□□ -1.86
CAF120YNL278W HIF1Q12373 385 aa3.41□□□□□ -1.86
CAF120YNL278W BSD2P38356 321 aa3.4□□□□□ -1.86
CAF120YNL278W UTP22P53254 1237 aaPredicted RBP3.4□□□□□ -1.86
CAF120YNL278W RAD50P12753 1312 aa3.4□□□□□ -1.87
CAF120YNL278W RRN6P32786 894 aa3.4□□□□□ -1.87
CAF120YNL278W RPL22AP05749 121 aaKnown RBP3.39□□□□□ -1.87
CAF120YNL278W RPS19AP07280 144 aaKnown RBP3.39□□□□□ -1.87
CAF120YNL278W RPS19BP07281 144 aaPredicted RBP3.39□□□□□ -1.87
CAF120YNL278W YER156CP40093 338 aaKnown RBP3.39□□□□□ -1.87
CAF120YNL278W ASF1P32447 279 aa3.39□□□□□ -1.87
CAF120YNL278W DEF1P35732 738 aaKnown RBP3.39□□□□□ -1.87
CAF120YNL278W YDR306CQ06640 478 aa3.39□□□□□ -1.87
CAF120YNL278W TFB3Q03290 321 aa3.39□□□□□ -1.87
CAF120YNL278W NOB1Q08444 459 aaKnown RBP3.39□□□□□ -1.87
CAF120YNL278W PBS2P08018 668 aa3.38□□□□□ -1.87
CAF120YNL278W TOA1P32773 286 aa3.38□□□□□ -1.87
CAF120YNL278W MPE1P35728 441 aaKnown RBP3.38□□□□□ -1.87
CAF120YNL278W TOS1P38288 455 aa3.38□□□□□ -1.87
CAF120YNL278W CHZ1P40019 153 aaPredicted RBP3.38□□□□□ -1.87
CAF120YNL278W RRP46P53256 223 aaPredicted RBP3.38□□□□□ -1.87
CAF120YNL278W PSH1Q12161 406 aa3.38□□□□□ -1.87
CAF120YNL278W MOT2P34909 587 aaKnown RBP3.38□□□□□ -1.87
CAF120YNL278W RTS3P53289 263 aa3.38□□□□□ -1.87
CAF120YNL278W NYV1Q12255 253 aa3.38□□□□□ -1.87
CAF120YNL278W HVG1P0CE11 249 aa3.37□□□□□ -1.87
CAF120YNL278W EPS1P40557 701 aa3.37□□□□□ -1.87
CAF120YNL278W PDI1P17967 522 aaKnown RBP3.37□□□□□ -1.87
CAF120YNL278W RTG2P32608 588 aaKnown RBP3.37□□□□□ -1.87
CAF120YNL278W OPY1P38271 328 aa3.37□□□□□ -1.87
CAF120YNL278W DOT5P40553 215 aa3.37□□□□□ -1.87
CAF120YNL278W RRP15Q06511 250 aaPredicted RBP3.37□□□□□ -1.87
CAF120YNL278W SSF1P38789 453 aaPredicted RBP3.37□□□□□ -1.87
CAF120YNL278W LYS4P49367 693 aaPredicted RBP3.37□□□□□ -1.87
CAF120YNL278W KRE33P53914 1056 aaKnown RBP3.37□□□□□ -1.87
CAF120YNL278W HPC2Q01448 625 aa3.37□□□□□ -1.87
CAF120YNL278W HAP5Q02516 242 aa3.37□□□□□ -1.87
CAF120YNL278W ECM23Q02710 187 aa3.37□□□□□ -1.87
CAF120YNL278W YPP1P46951 817 aa3.36□□□□□ -1.87
CAF120YNL278W FOX2Q02207 900 aaKnown RBP3.36□□□□□ -1.87
CAF120YNL278W MRM1P25270 412 aa3.36□□□□□ -1.87
CAF120YNL278W UGA3P26370 528 aa3.36□□□□□ -1.87
CAF120YNL278W FMP30Q02883 468 aa3.36□□□□□ -1.87
CAF120YNL278W TYS1P36421 394 aaKnown RBP3.35□□□□□ -1.87
CAF120YNL278W RFT1P38206 574 aaPredicted RBP3.35□□□□□ -1.87
CAF120YNL278W PES4P39684 611 aa3.35□□□□□ -1.87
CAF120YNL278W ATG32P40458 529 aa3.35□□□□□ -1.87
CAF120YNL278W LEU2P04173 364 aaPredicted RBP3.35□□□□□ -1.87
CAF120YNL278W PRD1P25375 712 aa3.35□□□□□ -1.87
CAF120YNL278W YIL089WP40500 205 aa3.35□□□□□ -1.87
CAF120YNL278W PMD1P32634 1753 aa3.35□□□□□ -1.87
CAF120YNL278W ERG12P07277 443 aa3.35□□□□□ -1.87
CAF120YNL278W BRN1P38170 754 aa3.35□□□□□ -1.87
CAF120YNL278W RSC30P38781 883 aa3.34□□□□□ -1.87
CAF120YNL278W ECM30Q06673 1274 aa3.34□□□□□ -1.87
CAF120YNL278W ELM1P32801 640 aa3.34□□□□□ -1.88
CAF120YNL278W BIM1P40013 344 aa3.34□□□□□ -1.88
CAF120YNL278W YIL092WP40497 633 aa3.34□□□□□ -1.88
CAF120YNL278W IRC3Q06683 689 aa3.34□□□□□ -1.88
CAF120YNL278W NOP53Q12080 455 aaKnown RBP3.34□□□□□ -1.88
CAF120YNL278W SUI2P20459 304 aaKnown RBP3.33□□□□□ -1.88
CAF120YNL278W IME2P32581 645 aa3.33□□□□□ -1.88
CAF120YNL278W RPS0AP32905 252 aaKnown RBP3.33□□□□□ -1.88
CAF120YNL278W OSW7P43611 510 aa3.33□□□□□ -1.88
CAF120YNL278W MTC5Q03897 1148 aa3.33□□□□□ -1.88
CAF120YNL278W RIF1P29539 1916 aa3.33□□□□□ -1.88
CAF120YNL278W ISW1P38144 1129 aa3.33□□□□□ -1.88
CAF120YNL278W YJL181WP46987 611 aa3.33□□□□□ -1.88
CAF120YNL278W RTF1P53064 558 aa3.33□□□□□ -1.88
CAF120YNL278W ZDS2P54786 942 aa3.33□□□□□ -1.88
CAF120YNL278W NHA1Q99271 985 aa3.33□□□□□ -1.88
CAF120YNL278W FBP1P09201 348 aa3.32□□□□□ -1.88
CAF120YNL278W KTR1P27810 393 aaKnown RBP3.32□□□□□ -1.88
CAF120YNL278W SPT16P32558 1035 aaKnown RBP3.32□□□□□ -1.88
CAF120YNL278W FPR3P38911 411 aaKnown RBP3.32□□□□□ -1.88
CAF120YNL278W ATE1P16639 503 aa3.32□□□□□ -1.88
CAF120YNL278W PXL1P36166 706 aa3.32□□□□□ -1.88
CAF120YNL278W IES2P40154 320 aa3.32□□□□□ -1.88
CAF120YNL278W YML083CQ04526 418 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms