RNA–Protein interactions for RNA: YNL272C

SEC2, Transcript of Guanyl-nucleotide exchange factor for the small G-protein Sec4p, yeastyeast

Gene SEC2, Length 2,280 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC2YNL272C PDR11P40550 1411 aa5.66□□□□□ -1.5
SEC2YNL272C VRP1P37370 817 aa5.65□□□□□ -1.5
SEC2YNL272C YBL036CP38197 257 aa5.65□□□□□ -1.5
SEC2YNL272C IML1P47170 1584 aa5.65□□□□□ -1.5
SEC2YNL272C NUP188P52593 1655 aaKnown RBP5.65□□□□□ -1.5
SEC2YNL272C BIM1P40013 344 aa5.65□□□□□ -1.51
SEC2YNL272C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.65□□□□□ -1.51not detected
SEC2YNL272C DNF3Q12674 1656 aa5.65□□□□□ -1.51
SEC2YNL272C GCN2P15442 1659 aa5.64□□□□□ -1.51
SEC2YNL272C ATG32P40458 529 aa5.64□□□□□ -1.51
SEC2YNL272C YDL206WQ12424 762 aa5.64□□□□□ -1.51
SEC2YNL272C NOP7P53261 605 aaKnown RBP5.64□□□□□ -1.51
SEC2YNL272C SDH2P21801 266 aa5.63□□□□□ -1.51
SEC2YNL272C TBF1Q02457 562 aa5.63□□□□□ -1.51
SEC2YNL272C GYP1Q08484 637 aa5.63□□□□□ -1.51
SEC2YNL272C MAK16P10962 306 aaPredicted RBP5.62□□□□□ -1.51
SEC2YNL272C RLF2Q12495 606 aa5.62□□□□□ -1.51
SEC2YNL272C BCK2P33306 851 aa5.61□□□□□ -1.51
SEC2YNL272C ERG12P07277 443 aa5.6□□□□□ -1.51
SEC2YNL272C YDJ1P25491 409 aaKnown RBP5.6□□□□□ -1.51
SEC2YNL272C CSE4P36012 229 aa5.6□□□□□ -1.51
SEC2YNL272C RAV1P47104 1357 aa5.6□□□□□ -1.51
SEC2YNL272C PDC1P06169 563 aaKnown RBP5.6□□□□□ -1.51
SEC2YNL272C TIF1P10081 395 aaKnown RBP5.6□□□□□ -1.51
SEC2YNL272C YNL108CP53929 270 aa5.6□□□□□ -1.51
SEC2YNL272C SAS4Q04003 481 aa5.6□□□□□ -1.51
SEC2YNL272C SPT16P32558 1035 aaKnown RBP5.59□□□□□ -1.51
SEC2YNL272C RPA14P50106 137 aa5.59□□□□□ -1.51
SEC2YNL272C RTC1Q08281 1341 aa5.59□□□□□ -1.52
SEC2YNL272C MOD5P07884 428 aa5.58□□□□□ -1.52
SEC2YNL272C YPR097WQ06839 1073 aa5.58□□□□□ -1.52
SEC2YNL272C SUP45P12385 437 aaKnown RBP5.57□□□□□ -1.52
SEC2YNL272C PAT1P25644 796 aaKnown RBP5.57□□□□□ -1.52
SEC2YNL272C MRX12P47084 519 aa5.57□□□□□ -1.52
SEC2YNL272C ALR1Q08269 859 aa5.57□□□□□ -1.52
SEC2YNL272C HAP1P0CE41 1502 aa5.56□□□□□ -1.52
SEC2YNL272C KRE5P22023 1365 aa5.56□□□□□ -1.52
SEC2YNL272C ENO2P00925 437 aaKnown RBP5.56□□□□□ -1.52
SEC2YNL272C HXT10P43581 546 aa5.56□□□□□ -1.52
SEC2YNL272C TAF5P38129 798 aa5.55□□□□□ -1.52
SEC2YNL272C RIA1P53893 1110 aa5.55□□□□□ -1.52
SEC2YNL272C CAB1Q04430 367 aa5.55□□□□□ -1.52
SEC2YNL272C RAD9P14737 1309 aa5.55□□□□□ -1.52
SEC2YNL272C RRD1P40454 393 aaKnown RBP5.55□□□□□ -1.52
SEC2YNL272C KXD1P53158 218 aa5.55□□□□□ -1.52
SEC2YNL272C ALD4P46367 519 aaKnown RBP5.54□□□□□ -1.52
SEC2YNL272C SPT5P27692 1063 aaKnown RBP5.54□□□□□ -1.52
SEC2YNL272C TPD3P31383 635 aa5.54□□□□□ -1.52
SEC2YNL272C RTG2P32608 588 aaKnown RBP5.54□□□□□ -1.52
SEC2YNL272C XDJ1P39102 459 aa5.54□□□□□ -1.52
SEC2YNL272C CST6P40535 587 aa5.54□□□□□ -1.52
SEC2YNL272C THI12P42883 340 aa5.54□□□□□ -1.52
SEC2YNL272C THI5P43534 340 aa5.54□□□□□ -1.52
SEC2YNL272C THI11P47183 340 aa5.54□□□□□ -1.52
SEC2YNL272C THI13Q07748 340 aa5.54□□□□□ -1.52
SEC2YNL272C ESL2P36168 1195 aa5.53□□□□□ -1.52
SEC2YNL272C RPL34BP40525 121 aaKnown RBP5.53□□□□□ -1.52
SEC2YNL272C FIG4P42837 879 aa5.53□□□□□ -1.52
SEC2YNL272C NAF1P53919 492 aaKnown RBP5.53□□□□□ -1.52
SEC2YNL272C BDP1P46678 594 aa5.53□□□□□ -1.52
SEC2YNL272C RIM21P48565 533 aa5.53□□□□□ -1.52
SEC2YNL272C ORC1P54784 914 aaPredicted RBP5.53□□□□□ -1.52
SEC2YNL272C YPR084WQ06821 456 aa5.53□□□□□ -1.52
SEC2YNL272C YPR204WQ08995 1032 aa5.53□□□□□ -1.52
SEC2YNL272C ISF1P32488 338 aa5.52□□□□□ -1.53
SEC2YNL272C MCM16Q12262 181 aa5.52□□□□□ -1.53
SEC2YNL272C MRF1P30775 413 aaPredicted RBP5.51□□□□□ -1.53
SEC2YNL272C BCK1Q01389 1478 aa5.51□□□□□ -1.53
SEC2YNL272C ENO1P00924 437 aaKnown RBP5.51□□□□□ -1.53
SEC2YNL272C TAF8Q03750 510 aa5.51□□□□□ -1.53
SEC2YNL272C MRX10Q05648 414 aa5.5□□□□□ -1.53
SEC2YNL272C PUS5Q06244 254 aa5.5□□□□□ -1.53
SEC2YNL272C CFT1Q06632 1357 aaKnown RBP5.5□□□□□ -1.53
SEC2YNL272C NUP192P47054 1683 aa5.5□□□□□ -1.53
SEC2YNL272C TEC1P18412 486 aa5.5□□□□□ -1.53
SEC2YNL272C VAC17P25591 423 aa5.5□□□□□ -1.53
SEC2YNL272C YNR029CP53729 429 aaKnown RBP5.5□□□□□ -1.53
SEC2YNL272C FRK1Q03002 865 aaPredicted RBP5.5□□□□□ -1.53
SEC2YNL272C RDS2P19541 446 aaKnown RBP5.49□□□□□ -1.53
SEC2YNL272C KIP3P53086 805 aaKnown RBP5.49□□□□□ -1.53
SEC2YNL272C USO1P25386 1790 aa5.49□□□□□ -1.53
SEC2YNL272C EMP47P43555 445 aa5.49□□□□□ -1.53
SEC2YNL272C NAP1P25293 417 aaKnown RBP5.48□□□□□ -1.53
SEC2YNL272C FRA1Q07825 749 aa5.47□□□□□ -1.53
SEC2YNL272C TY1B-NL2Q99337 1749 aaKnown RBP5.47□□□□□ -1.53
SEC2YNL272C RAS1P01119 309 aa5.46□□□□□ -1.53
SEC2YNL272C SPE2P21182 396 aa5.46□□□□□ -1.53
SEC2YNL272C CPS1P27614 576 aa5.46□□□□□ -1.53
SEC2YNL272C TTI1P36097 1038 aa5.46□□□□□ -1.53
SEC2YNL272C AMS1P22855 1083 aa5.46□□□□□ -1.54
SEC2YNL272C YEL077CQ3E7X8 1277 aa5.46□□□□□ -1.54
SEC2YNL272C GUT2P32191 649 aa5.45□□□□□ -1.54
SEC2YNL272C CLA4P48562 842 aa5.45□□□□□ -1.54
SEC2YNL272C RCM1P53972 490 aa5.45□□□□□ -1.54
SEC2YNL272C STE20Q03497 939 aaKnown RBP5.45□□□□□ -1.54
SEC2YNL272C POL5P39985 1022 aaKnown RBP5.44□□□□□ -1.54
SEC2YNL272C APL6P46682 809 aa5.44□□□□□ -1.54
SEC2YNL272C YPP1P46951 817 aa5.44□□□□□ -1.54
SEC2YNL272C PEP12P32854 288 aa5.43□□□□□ -1.54
SEC2YNL272C SUB2Q07478 446 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms