RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeast

Gene CUE1, Length 612 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE1	YMR264W	TEA1	P47988	759 aa		14.19	□□□□□ -0.14
CUE1	YMR264W	PDR18	P53756	1333 aa		14.18	□□□□□ -0.14
CUE1	YMR264W	YJL181W	P46987	611 aa		14.18	□□□□□ -0.14
CUE1	YMR264W	ITC1	P53125	1264 aa		14.18	□□□□□ -0.14
CUE1	YMR264W	PSH1	Q12161	406 aa		14.18	□□□□□ -0.14
CUE1	YMR264W	DCD1	P06773	312 aa		14.17	□□□□□ -0.14
CUE1	YMR264W	ECM21	P38167	1117 aa	Known RBP	14.17	□□□□□ -0.14
CUE1	YMR264W	RPN11	P43588	306 aa	Known RBP	14.17	□□□□□ -0.14
CUE1	YMR264W	YGL082W	P53155	381 aa		14.17	□□□□□ -0.14
CUE1	YMR264W	HXT13	P39924	564 aa		14.16	□□□□□ -0.14
CUE1	YMR264W	FCP1	Q03254	732 aa		14.16	□□□□□ -0.14
CUE1	YMR264W	MSB4	Q12317	492 aa		14.16	□□□□□ -0.14
CUE1	YMR264W	NOT3	P06102	836 aa	Known RBP	14.15	□□□□□ -0.14
CUE1	YMR264W	SER1	P33330	395 aa	Known RBP	14.15	□□□□□ -0.14
CUE1	YMR264W	HXT10	P43581	546 aa		14.15	□□□□□ -0.14
CUE1	YMR264W	RMD1	Q03441	430 aa		14.15	□□□□□ -0.14
CUE1	YMR264W	DUR1,2	P32528	1835 aa	Known RBP	14.15	□□□□□ -0.14
CUE1	YMR264W	SUP35	P05453	685 aa	Known RBP	14.14	□□□□□ -0.15
CUE1	YMR264W	MLC1	P53141	149 aa		14.14	□□□□□ -0.15
CUE1	YMR264W	HXT17	P53631	564 aa		14.14	□□□□□ -0.15
CUE1	YMR264W	MTC5	Q03897	1148 aa		14.14	□□□□□ -0.15
CUE1	YMR264W	VPS24	P36095	224 aa	Known RBP	14.13	□□□□□ -0.15
CUE1	YMR264W	GRE2	Q12068	342 aa	Known RBP	14.13	□□□□□ -0.15
CUE1	YMR264W	SRS2	P12954	1174 aa		14.12	□□□□□ -0.15
CUE1	YMR264W	YGL242C	P53066	181 aa		14.12	□□□□□ -0.15
CUE1	YMR264W	SLA1	P32790	1244 aa		14.11	□□□□□ -0.15
CUE1	YMR264W	DJP1	P40564	432 aa		14.11	□□□□□ -0.15
CUE1	YMR264W	BRE1	Q07457	700 aa	Known RBP	14.11	□□□□□ -0.15
CUE1	YMR264W	NYV1	Q12255	253 aa		14.11	□□□□□ -0.15
CUE1	YMR264W	SNF7	P39929	240 aa	Known RBP	14.1	□□□□□ -0.15
CUE1	YMR264W	LSP1	Q12230	341 aa	Known RBP	14.1	□□□□□ -0.15
CUE1	YMR264W	CLC1	P17891	233 aa		14.09	□□□□□ -0.15
CUE1	YMR264W	NPR2	P39923	615 aa		14.09	□□□□□ -0.15
CUE1	YMR264W	FPR4	Q06205	392 aa	Predicted RBP	14.09	□□□□□ -0.15
CUE1	YMR264W	KTR3	P38130	404 aa	Predicted RBP	14.08	□□□□□ -0.16
CUE1	YMR264W	ALO1	P54783	526 aa	Known RBP	14.08	□□□□□ -0.16
CUE1	YMR264W	RIM20	Q12033	661 aa		14.08	□□□□□ -0.16
CUE1	YMR264W	MRPS35	P53292	345 aa		14.07	□□□□□ -0.16
CUE1	YMR264W	YMR074C	Q04773	145 aa		14.07	□□□□□ -0.16
CUE1	YMR264W	GYP5	Q12344	894 aa		14.07	□□□□□ -0.16
CUE1	YMR264W	SNU66	Q12420	587 aa	Predicted RBP	14.07	□□□□□ -0.16
CUE1	YMR264W	RNR2	P09938	399 aa	Known RBP	14.06	□□□□□ -0.16
CUE1	YMR264W	ROX1	P25042	368 aa		14.06	□□□□□ -0.16
CUE1	YMR264W	SSK22	P25390	1331 aa	Predicted RBP	14.06	□□□□□ -0.16
CUE1	YMR264W	SAC3	P46674	1301 aa		14.05	□□□□□ -0.16
CUE1	YMR264W	AAP1	P37898	856 aa	Known RBP	14.04	□□□□□ -0.16
CUE1	YMR264W	HAT1	Q12341	374 aa		14.03	□□□□□ -0.16
CUE1	YMR264W	TRL1	P09880	827 aa	Known RBP	14.02	□□□□□ -0.17
CUE1	YMR264W	UBP1	P25037	809 aa		14.02	□□□□□ -0.17
CUE1	YMR264W	KTR1	P27810	393 aa	Known RBP	14.02	□□□□□ -0.17
CUE1	YMR264W	UBP16	Q02863	499 aa		14.02	□□□□□ -0.17
CUE1	YMR264W	BUG1	Q12191	341 aa		14.02	□□□□□ -0.17
CUE1	YMR264W	MSP1	P28737	362 aa		14.01	□□□□□ -0.17
CUE1	YMR264W	AI2	P03876	854 aa		14	□□□□□ -0.17
CUE1	YMR264W	SEC18	P18759	758 aa	Known RBP	14	□□□□□ -0.17
CUE1	YMR264W	KRI1	P42846	591 aa	Known RBP	14	□□□□□ -0.17
CUE1	YMR264W	STM1	P39015	273 aa	Known RBP	13.99	□□□□□ -0.17
CUE1	YMR264W	NPA3	P47122	385 aa		13.99	□□□□□ -0.17
CUE1	YMR264W	VPS20	Q04272	221 aa		13.99	□□□□□ -0.17
CUE1	YMR264W	EPS1	P40557	701 aa		13.98	□□□□□ -0.17
CUE1	YMR264W	PIB2	P53191	635 aa		13.98	□□□□□ -0.17
CUE1	YMR264W	YNL193W	P53870	558 aa		13.98	□□□□□ -0.17
CUE1	YMR264W	RPN7	Q06103	429 aa	Known RBP	13.98	□□□□□ -0.17
CUE1	YMR264W	RAT1	Q02792	1006 aa	Known RBP	13.97	□□□□□ -0.17
CUE1	YMR264W	ADR1	P07248	1323 aa		13.96	□□□□□ -0.17
CUE1	YMR264W	BUD31	P25337	157 aa	Predicted RBP	13.96	□□□□□ -0.17
CUE1	YMR264W	PBY1	P38254	753 aa		13.96	□□□□□ -0.17
CUE1	YMR264W	GLN1	P32288	370 aa	Known RBP	13.95	□□□□□ -0.18
CUE1	YMR264W	AIM9	P40053	627 aa	Known RBP	13.95	□□□□□ -0.18
CUE1	YMR264W	CTI6	Q08923	506 aa		13.95	□□□□□ -0.18
CUE1	YMR264W	TPM1	P17536	199 aa	Known RBP	13.94	□□□□□ -0.18
CUE1	YMR264W	OSH3	P38713	996 aa	Known RBP	13.94	□□□□□ -0.18
CUE1	YMR264W	LYS4	P49367	693 aa	Predicted RBP	13.94	□□□□□ -0.18
CUE1	YMR264W	UTP22	P53254	1237 aa	Predicted RBP	13.94	□□□□□ -0.18
CUE1	YMR264W	BDF1	P35817	686 aa		13.93	□□□□□ -0.18
CUE1	YMR264W	RRI2	Q12348	645 aa		13.93	□□□□□ -0.18
CUE1	YMR264W	POM152	P39685	1337 aa		13.92	□□□□□ -0.18
CUE1	YMR264W	DIB1	Q06819	143 aa	Predicted RBP	13.92	□□□□□ -0.18
CUE1	YMR264W	BIK1	P11709	440 aa		13.91	□□□□□ -0.18
CUE1	YMR264W	NGR1	P32831	672 aa	Known RBP	13.91	□□□□□ -0.18
CUE1	YMR264W	ARL1	P38116	183 aa	Known RBP	13.91	□□□□□ -0.18
CUE1	YMR264W	BDH2	P39713	417 aa		13.91	□□□□□ -0.18
CUE1	YMR264W	CWH41	P53008	833 aa		13.91	□□□□□ -0.18
CUE1	YMR264W	SLN1	P39928	1220 aa	Predicted RBP	13.9	□□□□□ -0.18
CUE1	YMR264W	SPO22	P40511	975 aa		13.9	□□□□□ -0.18
CUE1	YMR264W	YGL081W	P53156	320 aa		13.9	□□□□□ -0.18
CUE1	YMR264W	COG8	Q04632	607 aa		13.9	□□□□□ -0.18
CUE1	YMR264W	RPG1	P38249	964 aa	Known RBP	13.89	□□□□□ -0.19
CUE1	YMR264W	HAP5	Q02516	242 aa		13.89	□□□□□ -0.19
CUE1	YMR264W	PIF1	P07271	859 aa		13.88	□□□□□ -0.19
CUE1	YMR264W	OPI1	P21957	404 aa		13.88	□□□□□ -0.19
CUE1	YMR264W	SRC1	Q03707	834 aa		13.88	□□□□□ -0.19
CUE1	YMR264W	HRQ1	Q05549	1077 aa		13.88	□□□□□ -0.19
CUE1	YMR264W	CIC1	P38779	376 aa	Known RBP	13.87	□□□□□ -0.19
CUE1	YMR264W	YMR147W	P40218	223 aa	Known RBP	13.87	□□□□□ -0.19
CUE1	YMR264W	HST1	P53685	503 aa		13.87	□□□□□ -0.19
CUE1	YMR264W	THI3	Q07471	609 aa		13.87	□□□□□ -0.19
CUE1	YMR264W	RIX7	Q07844	837 aa	Known RBP	13.87	□□□□□ -0.19
CUE1	YMR264W	RPL19A	P0CX82	189 aa	Known RBP	13.86	□□□□□ -0.19
CUE1	YMR264W	RPL19B	P0CX83	189 aa	Predicted RBP	13.86	□□□□□ -0.19

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms