RNA–Protein interactions for RNA: YMR117C

SPC24, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC24, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC24YMR117C UBP1P25037 809 aa8.69□□□□□ -1.02
SPC24YMR117C PUF6Q04373 656 aaKnown RBP8.69□□□□□ -1.02
SPC24YMR117C TRS33Q99394 268 aa8.68□□□□□ -1.02
SPC24YMR117C NUP85P46673 744 aa8.67□□□□□ -1.02
SPC24YMR117C UTP7P40055 554 aaKnown RBP8.66□□□□□ -1.02
SPC24YMR117C SUM1P46676 1062 aa8.66□□□□□ -1.02
SPC24YMR117C LSC2P53312 427 aa8.65□□□□□ -1.02
SPC24YMR117C DLD1P32891 587 aa8.64□□□□□ -1.03
SPC24YMR117C CDC3P32457 520 aaKnown RBP8.63□□□□□ -1.03
SPC24YMR117C CWH41P53008 833 aa8.63□□□□□ -1.03
SPC24YMR117C MCM1P11746 286 aa8.62□□□□□ -1.03
SPC24YMR117C CWC15Q03772 175 aaKnown RBP8.62□□□□□ -1.03
SPC24YMR117C YPQ2Q06328 317 aa8.62□□□□□ -1.03
SPC24YMR117C YJR098CP47139 656 aa8.61□□□□□ -1.03
SPC24YMR117C PUN1Q06991 263 aa8.61□□□□□ -1.03
SPC24YMR117C SRS2P12954 1174 aa8.6□□□□□ -1.03
SPC24YMR117C NGR1P32831 672 aaKnown RBP8.6□□□□□ -1.03
SPC24YMR117C ALA1P40825 983 aaKnown RBP8.6□□□□□ -1.03
SPC24YMR117C MSN5P52918 1224 aa8.6□□□□□ -1.03
SPC24YMR117C YLR346CQ06139 101 aa8.6□□□□□ -1.03
SPC24YMR117C VTC4P47075 721 aa8.59□□□□□ -1.03
SPC24YMR117C AHP1P38013 176 aaKnown RBP8.57□□□□□ -1.04
SPC24YMR117C SSN3P39073 555 aa8.57□□□□□ -1.04
SPC24YMR117C ALD4P46367 519 aaKnown RBP8.57□□□□□ -1.04
SPC24YMR117C PNP1Q05788 311 aa8.57□□□□□ -1.04
SPC24YMR117C TPS3P38426 1054 aaKnown RBP8.56□□□□□ -1.04
SPC24YMR117C UBP2Q01476 1272 aa8.56□□□□□ -1.04
SPC24YMR117C DAL1P32375 460 aa8.55□□□□□ -1.04
SPC24YMR117C SUV3P32580 737 aa8.55□□□□□ -1.04
SPC24YMR117C JJJ2P46997 583 aa8.55□□□□□ -1.04
SPC24YMR117C OPT2Q06593 877 aa8.55□□□□□ -1.04
SPC24YMR117C TCB1Q12466 1186 aa8.55□□□□□ -1.04
SPC24YMR117C SCD5P34758 872 aa8.54□□□□□ -1.04
SPC24YMR117C GLY1P37303 387 aaKnown RBP8.52□□□□□ -1.05
SPC24YMR117C KAR5Q04746 504 aa8.52□□□□□ -1.05
SPC24YMR117C MET22P32179 357 aa8.51□□□□□ -1.05
SPC24YMR117C SCW11P53189 542 aa8.51□□□□□ -1.05
SPC24YMR117C FOX2Q02207 900 aaKnown RBP8.51□□□□□ -1.05
SPC24YMR117C YDR444WQ04093 687 aa8.51□□□□□ -1.05
SPC24YMR117C CAB1Q04430 367 aa8.51□□□□□ -1.05
SPC24YMR117C LCB5Q06147 687 aaKnown RBP8.51□□□□□ -1.05
SPC24YMR117C FUR4P05316 633 aaKnown RBP8.5□□□□□ -1.05
SPC24YMR117C RRN6P32786 894 aa8.5□□□□□ -1.05
SPC24YMR117C HXT5P38695 592 aa8.5□□□□□ -1.05
SPC24YMR117C HAT1Q12341 374 aa8.5□□□□□ -1.05
SPC24YMR117C SLA1P32790 1244 aa8.49□□□□□ -1.05
SPC24YMR117C YTA6P40328 754 aa8.49□□□□□ -1.05
SPC24YMR117C UTP4Q06679 776 aaKnown RBP8.49□□□□□ -1.05
SPC24YMR117C TY1A-DR3Q12441 440 aa8.49□□□□□ -1.05
SPC24YMR117C IRE1P32361 1115 aa8.48□□□□□ -1.05
SPC24YMR117C YBR197CP38306 217 aa8.48□□□□□ -1.05
SPC24YMR117C MLF3P32047 452 aa8.47□□□□□ -1.05
SPC24YMR117C ISC10P32645 267 aa8.47□□□□□ -1.05
SPC24YMR117C SHM1P37292 490 aaPredicted RBP8.47□□□□□ -1.05
SPC24YMR117C BOL3P39724 118 aa8.47□□□□□ -1.05
SPC24YMR117C UBP15P50101 1230 aa8.47□□□□□ -1.05
SPC24YMR117C Q0182Q9ZZW1 134 aa8.47□□□□□ -1.05
SPC24YMR117C SSF1P38789 453 aaPredicted RBP8.46□□□□□ -1.06
SPC24YMR117C YNL165WP53891 406 aa8.46□□□□□ -1.06
SPC24YMR117C TY1A-BLQ12266 440 aa8.46□□□□□ -1.06
SPC24YMR117C CDC19P00549 500 aaKnown RBP8.45□□□□□ -1.06
SPC24YMR117C RGA1P39083 1007 aa8.45□□□□□ -1.06
SPC24YMR117C OSH7P38755 437 aa8.44□□□□□ -1.06
SPC24YMR117C RPS31P05759 152 aaKnown RBP8.43□□□□□ -1.06
SPC24YMR117C MRPL33P20084 86 aa8.43□□□□□ -1.06
SPC24YMR117C PDC6P26263 563 aaKnown RBP8.43□□□□□ -1.06
SPC24YMR117C ATG1P53104 897 aa8.43□□□□□ -1.06
SPC24YMR117C YML020WQ03722 664 aa8.43□□□□□ -1.06
SPC24YMR117C PSH1Q12161 406 aa8.43□□□□□ -1.06
SPC24YMR117C LSO1Q3E827 93 aa8.43□□□□□ -1.06
SPC24YMR117C YBL113CQ7M4S9 792 aa8.43□□□□□ -1.06
SPC24YMR117C GLO3P38682 493 aaKnown RBP8.41□□□□□ -1.06
SPC24YMR117C ERP5P38819 212 aa8.4□□□□□ -1.06
SPC24YMR117C LEU1P07264 779 aaKnown RBP8.38□□□□□ -1.07
SPC24YMR117C VMA3P25515 160 aa8.38□□□□□ -1.07
SPC24YMR117C GAR1P28007 205 aaKnown RBP8.38□□□□□ -1.07
SPC24YMR117C BOI1P38041 980 aaKnown RBP8.38□□□□□ -1.07
SPC24YMR117C GRS1P38088 690 aaKnown RBP8.38□□□□□ -1.07
SPC24YMR117C QDR2P40474 542 aa8.38□□□□□ -1.07
SPC24YMR117C QDR1P40475 563 aa8.38□□□□□ -1.07
SPC24YMR117C MTO1P53070 669 aa8.38□□□□□ -1.07
SPC24YMR117C NOP8Q08287 484 aaPredicted RBP8.38□□□□□ -1.07
SPC24YMR117C APC11Q12157 165 aa8.38□□□□□ -1.07
SPC24YMR117C DYS1P38791 387 aa8.37□□□□□ -1.07
SPC24YMR117C SPR3P41901 512 aa8.37□□□□□ -1.07
SPC24YMR117C ROG3P43602 733 aa8.37□□□□□ -1.07
SPC24YMR117C TRL1P09880 827 aaKnown RBP8.36□□□□□ -1.07
SPC24YMR117C KAP122P32767 1081 aa8.36□□□□□ -1.07
SPC24YMR117C SLD2P34252 453 aa8.36□□□□□ -1.07
SPC24YMR117C LDH1P38139 375 aa8.36□□□□□ -1.07
SPC24YMR117C ALD2P47771 506 aa8.36□□□□□ -1.07
SPC24YMR117C NAM8Q00539 523 aaKnown RBP8.36□□□□□ -1.07
SPC24YMR117C TY1A-MR1Q04215 440 aa8.36□□□□□ -1.07
SPC24YMR117C STM1P39015 273 aaKnown RBP8.35□□□□□ -1.07
SPC24YMR117C ACO2P39533 789 aa8.35□□□□□ -1.07
SPC24YMR117C ACF4P47129 309 aa8.35□□□□□ -1.07
SPC24YMR117C RPB10P22139 70 aa8.34□□□□□ -1.07
SPC24YMR117C GBP2P25555 427 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
SPC24YMR117C CAF120P53836 1060 aa8.34□□□□□ -1.07
SPC24YMR117C RPP1AP05318 106 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms