RNA–Protein interactions for RNA: YMR106C

YKU80, Transcript of Subunit of the telomeric Ku complex (Yku70p-Yku80p), yeastyeast

Gene YKU80, Length 1,890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKU80YMR106C TBS1P38114 1094 aa3.18□□□□□ -1.9
YKU80YMR106C DOS2P54858 310 aa3.18□□□□□ -1.9
YKU80YMR106C BDS1Q08347 646 aa3.18□□□□□ -1.9
YKU80YMR106C SPT2P06843 333 aaPredicted RBP3.18□□□□□ -1.9
YKU80YMR106C STE6P12866 1290 aa3.18□□□□□ -1.9
YKU80YMR106C GEF1P37020 779 aa3.18□□□□□ -1.9
YKU80YMR106C MSB3P48566 633 aaPredicted RBP3.18□□□□□ -1.9
YKU80YMR106C ECM23Q02710 187 aa3.18□□□□□ -1.9
YKU80YMR106C HDA3Q06623 655 aa3.18□□□□□ -1.9
YKU80YMR106C NOB1Q08444 459 aaKnown RBP3.18□□□□□ -1.9
YKU80YMR106C CBC2Q08920 208 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
YKU80YMR106C DAT1P13483 248 aaKnown RBP3.17□□□□□ -1.9
YKU80YMR106C MIP1P15801 1254 aa3.17□□□□□ -1.9
YKU80YMR106C UTR2P32623 467 aa3.17□□□□□ -1.9
YKU80YMR106C SPC42P36094 363 aa3.17□□□□□ -1.9
YKU80YMR106C NAB3P38996 802 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
YKU80YMR106C AIM9P40053 627 aaKnown RBP3.17□□□□□ -1.9
YKU80YMR106C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
YKU80YMR106C YJR115WP47152 169 aa3.17□□□□□ -1.9
YKU80YMR106C YTA7P40340 1379 aa3.17□□□□□ -1.9
YKU80YMR106C ARG82P07250 355 aa3.16□□□□□ -1.9
YKU80YMR106C HAL5P38970 855 aaKnown RBP3.16□□□□□ -1.9
YKU80YMR106C DLD3P39976 496 aaKnown RBP3.16□□□□□ -1.9
YKU80YMR106C BRE2P43132 505 aa3.16□□□□□ -1.9
YKU80YMR106C YJR008WP47085 338 aa3.16□□□□□ -1.9
YKU80YMR106C PUF6Q04373 656 aaKnown RBP3.16□□□□□ -1.9
YKU80YMR106C DFG5Q05031 458 aa3.16□□□□□ -1.9
YKU80YMR106C GAS4Q08271 471 aa3.16□□□□□ -1.9
YKU80YMR106C SRF1Q12516 437 aa3.16□□□□□ -1.9
YKU80YMR106C PDI1P17967 522 aaKnown RBP3.16□□□□□ -1.9
YKU80YMR106C UBX7P38349 436 aa3.16□□□□□ -1.9
YKU80YMR106C SSF1P38789 453 aaPredicted RBP3.16□□□□□ -1.9
YKU80YMR106C ACS2P52910 683 aaKnown RBP3.16□□□□□ -1.9
YKU80YMR106C GCR2Q01722 534 aa3.16□□□□□ -1.9
YKU80YMR106C BUD21Q08492 214 aaPredicted RBP3.16□□□□□ -1.9
YKU80YMR106C VAN1P23642 535 aa3.15□□□□□ -1.91
YKU80YMR106C RPS0AP32905 252 aaKnown RBP3.15□□□□□ -1.91
YKU80YMR106C NTH2P35172 780 aa3.15□□□□□ -1.91
YKU80YMR106C ISW1P38144 1129 aa3.14□□□□□ -1.91
YKU80YMR106C PTK2P47116 818 aaKnown RBP3.14□□□□□ -1.91
YKU80YMR106C YML083CQ04526 418 aa3.14□□□□□ -1.91
YKU80YMR106C WTM2Q12206 467 aa3.14□□□□□ -1.91
YKU80YMR106C RPS6AP0CX37 236 aaKnown RBP3.13□□□□□ -1.91
YKU80YMR106C RPS6BP0CX38 236 aaPredicted RBP3.13□□□□□ -1.91
YKU80YMR106C CDC3P32457 520 aaKnown RBP3.13□□□□□ -1.91
YKU80YMR106C PAM1P37304 830 aaKnown RBP3.13□□□□□ -1.91
YKU80YMR106C MET10P39692 1035 aa3.13□□□□□ -1.91
YKU80YMR106C CWH41P53008 833 aa3.13□□□□□ -1.91
YKU80YMR106C ROM1P53046 1155 aa3.13□□□□□ -1.91
YKU80YMR106C KIP3P53086 805 aaKnown RBP3.13□□□□□ -1.91
YKU80YMR106C NHA1Q99271 985 aa3.13□□□□□ -1.91
YKU80YMR106C TRS33Q99394 268 aa3.13□□□□□ -1.91
YKU80YMR106C SWI5P08153 709 aa3.13□□□□□ -1.91
YKU80YMR106C AAD14P42884 376 aa3.13□□□□□ -1.91
YKU80YMR106C ZDS1P50111 915 aaKnown RBP3.13□□□□□ -1.91
YKU80YMR106C CYT1P07143 309 aa3.12□□□□□ -1.91
YKU80YMR106C UBP1P25037 809 aa3.12□□□□□ -1.91
YKU80YMR106C NUP85P46673 744 aa3.12□□□□□ -1.91
YKU80YMR106C MPP10P47083 593 aaKnown RBP3.12□□□□□ -1.91
YKU80YMR106C MET22P32179 357 aa3.11□□□□□ -1.91
YKU80YMR106C FPR3P38911 411 aaKnown RBP3.11□□□□□ -1.91
YKU80YMR106C RPT2P40327 437 aaKnown RBP3.11□□□□□ -1.91
YKU80YMR106C SUM1P46676 1062 aa3.11□□□□□ -1.91
YKU80YMR106C TY4A-JP47023 414 aa3.11□□□□□ -1.91
YKU80YMR106C CWC15Q03772 175 aaKnown RBP3.11□□□□□ -1.91
YKU80YMR106C YLR346CQ06139 101 aa3.11□□□□□ -1.91
YKU80YMR106C BRE1Q07457 700 aaKnown RBP3.11□□□□□ -1.91
YKU80YMR106C MCM1P11746 286 aa3.11□□□□□ -1.91
YKU80YMR106C SRS2P12954 1174 aa3.11□□□□□ -1.91
YKU80YMR106C NGR1P32831 672 aaKnown RBP3.11□□□□□ -1.91
YKU80YMR106C DLD1P32891 587 aa3.11□□□□□ -1.91
YKU80YMR106C ALA1P40825 983 aaKnown RBP3.11□□□□□ -1.91
YKU80YMR106C LSC2P53312 427 aa3.11□□□□□ -1.91
YKU80YMR106C PUN1Q06991 263 aa3.11□□□□□ -1.91
YKU80YMR106C OCA5P38738 679 aa3.1□□□□□ -1.91
YKU80YMR106C UTP7P40055 554 aaKnown RBP3.1□□□□□ -1.91
YKU80YMR106C MSN5P52918 1224 aa3.1□□□□□ -1.91
YKU80YMR106C RRN6P32786 894 aa3.09□□□□□ -1.91
YKU80YMR106C VTC4P47075 721 aa3.09□□□□□ -1.91
YKU80YMR106C UBP2Q01476 1272 aa3.09□□□□□ -1.91
YKU80YMR106C TLG1Q03322 224 aa3.09□□□□□ -1.91
YKU80YMR106C YDR444WQ04093 687 aa3.09□□□□□ -1.91
YKU80YMR106C PNP1Q05788 311 aa3.09□□□□□ -1.91
YKU80YMR106C OPT2Q06593 877 aa3.09□□□□□ -1.91
YKU80YMR106C UBX5Q06682 500 aa3.09□□□□□ -1.91
YKU80YMR106C FUR4P05316 633 aaKnown RBP3.09□□□□□ -1.92
YKU80YMR106C RAD2P07276 1031 aa3.09□□□□□ -1.92
YKU80YMR106C DAL5P15365 543 aa3.09□□□□□ -1.92
YKU80YMR106C DAL1P32375 460 aa3.09□□□□□ -1.92
YKU80YMR106C AIM21P40563 679 aa3.09□□□□□ -1.92
YKU80YMR106C NOP2P40991 618 aaKnown RBP3.09□□□□□ -1.92
YKU80YMR106C YJR098CP47139 656 aa3.09□□□□□ -1.92
YKU80YMR106C YAF9P53930 226 aa3.09□□□□□ -1.92
YKU80YMR106C YPQ2Q06328 317 aa3.09□□□□□ -1.92
YKU80YMR106C TAF13P11747 167 aa3.08□□□□□ -1.92
YKU80YMR106C GAR1P28007 205 aaKnown RBP3.08□□□□□ -1.92
YKU80YMR106C SLD2P34252 453 aa3.08□□□□□ -1.92
YKU80YMR106C SCD5P34758 872 aa3.08□□□□□ -1.92
YKU80YMR106C AHP1P38013 176 aaKnown RBP3.08□□□□□ -1.92
YKU80YMR106C SSN3P39073 555 aa3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms