RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP188YML103C TY1A-MR2P0CX69 440 aa1.78□□□□□ -2.12
NUP188YML103C MRT4P33201 236 aaKnown RBP1.78□□□□□ -2.12
NUP188YML103C SAP30P38429 201 aa1.78□□□□□ -2.12
NUP188YML103C YTA6P40328 754 aa1.78□□□□□ -2.12
NUP188YML103C TY1A-JR2P47099 440 aa1.78□□□□□ -2.12
NUP188YML103C YJR107WP47145 328 aa1.78□□□□□ -2.12
NUP188YML103C ENT3P47160 408 aa1.78□□□□□ -2.12
NUP188YML103C ROM1P53046 1155 aa1.78□□□□□ -2.12
NUP188YML103C TY1A-DR1Q03856 440 aa1.78□□□□□ -2.12
NUP188YML103C TY1A-ML1Q04706 440 aaKnown RBP1.78□□□□□ -2.12
NUP188YML103C TY1A-BRQ12217 440 aa1.78□□□□□ -2.12
NUP188YML103C TY1A-NL2Q12470 440 aa1.78□□□□□ -2.12
NUP188YML103C TY1A-GR2Q12485 440 aa1.78□□□□□ -2.12
NUP188YML103C FBP26P32604 452 aa1.78□□□□□ -2.12
NUP188YML103C NTH2P35172 780 aa1.78□□□□□ -2.12
NUP188YML103C YHL050CP38721 697 aa1.78□□□□□ -2.12
NUP188YML103C YHR219WP38900 624 aa1.78□□□□□ -2.12
NUP188YML103C ALD4P46367 519 aaKnown RBP1.78□□□□□ -2.12
NUP188YML103C YJL171CP46992 396 aa1.78□□□□□ -2.12
NUP188YML103C TRS120Q04183 1289 aa1.78□□□□□ -2.12
NUP188YML103C RPS6AP0CX37 236 aaKnown RBP1.78□□□□□ -2.12
NUP188YML103C RPS6BP0CX38 236 aaPredicted RBP1.78□□□□□ -2.12
NUP188YML103C NMD2P38798 1089 aaKnown RBP1.78□□□□□ -2.12
NUP188YML103C POL32P47110 350 aa1.78□□□□□ -2.12
NUP188YML103C ISU1Q03020 165 aa1.78□□□□□ -2.12
NUP188YML103C APC11Q12157 165 aa1.78□□□□□ -2.12
NUP188YML103C MOD5P07884 428 aa1.78□□□□□ -2.13
NUP188YML103C STE6P12866 1290 aa1.78□□□□□ -2.13
NUP188YML103C GLO3P38682 493 aaKnown RBP1.78□□□□□ -2.13
NUP188YML103C QDR1P40475 563 aa1.78□□□□□ -2.13
NUP188YML103C ISR1Q06098 443 aaKnown RBP1.78□□□□□ -2.13
NUP188YML103C DYS1P38791 387 aa1.77□□□□□ -2.13
NUP188YML103C SNF7P39929 240 aaKnown RBP1.77□□□□□ -2.13
NUP188YML103C PAC1P39946 494 aaKnown RBP1.77□□□□□ -2.13
NUP188YML103C TRL1P09880 827 aaKnown RBP1.77□□□□□ -2.13
NUP188YML103C MDJ2P42834 146 aa1.77□□□□□ -2.13
NUP188YML103C THI12P42883 340 aa1.77□□□□□ -2.13
NUP188YML103C THI5P43534 340 aa1.77□□□□□ -2.13
NUP188YML103C THI11P47183 340 aa1.77□□□□□ -2.13
NUP188YML103C RRP15Q06511 250 aaPredicted RBP1.77□□□□□ -2.13
NUP188YML103C THI13Q07748 340 aa1.77□□□□□ -2.13
NUP188YML103C DAT1P13483 248 aaKnown RBP1.77□□□□□ -2.13
NUP188YML103C MIP1P15801 1254 aa1.77□□□□□ -2.13
NUP188YML103C PDI1P17967 522 aaKnown RBP1.77□□□□□ -2.13
NUP188YML103C YGL081WP53156 320 aa1.77□□□□□ -2.13
NUP188YML103C NUT2Q06213 157 aa1.77□□□□□ -2.13
NUP188YML103C HDA3Q06623 655 aa1.77□□□□□ -2.13
NUP188YML103C BDS1Q08347 646 aa1.77□□□□□ -2.13
NUP188YML103C WTM2Q12206 467 aa1.77□□□□□ -2.13
NUP188YML103C ARG82P07250 355 aa1.77□□□□□ -2.13
NUP188YML103C FPR3P38911 411 aaKnown RBP1.77□□□□□ -2.13
NUP188YML103C CDC55Q00362 526 aa1.77□□□□□ -2.13
NUP188YML103C MCD1Q12158 566 aa1.77□□□□□ -2.13
NUP188YML103C LDH1P38139 375 aa1.76□□□□□ -2.13
NUP188YML103C FIR1P40020 876 aa1.76□□□□□ -2.13
NUP188YML103C HED1Q03937 162 aa1.76□□□□□ -2.13
NUP188YML103C RSC2Q06488 889 aa1.76□□□□□ -2.13
NUP188YML103C SHU2P38957 223 aa1.76□□□□□ -2.13
NUP188YML103C BOL3P39724 118 aa1.76□□□□□ -2.13
NUP188YML103C CBC2Q08920 208 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
NUP188YML103C SWI5P08153 709 aa1.76□□□□□ -2.13
NUP188YML103C SEC2P17065 759 aa1.76□□□□□ -2.13
NUP188YML103C YBL086CP38177 466 aa1.76□□□□□ -2.13
NUP188YML103C IPL1P38991 367 aa1.76□□□□□ -2.13
NUP188YML103C MAD1P40957 749 aa1.76□□□□□ -2.13
NUP188YML103C SUM1P46676 1062 aa1.76□□□□□ -2.13
NUP188YML103C AIR2Q12476 344 aaKnown RBP1.76□□□□□ -2.13
NUP188YML103C OCA5P38738 679 aa1.76□□□□□ -2.13
NUP188YML103C YNL011CP53980 444 aa1.76□□□□□ -2.13
NUP188YML103C VTC4P47075 721 aa1.75□□□□□ -2.13
NUP188YML103C YGR122WP53272 402 aa1.75□□□□□ -2.13
NUP188YML103C RSC4Q02206 625 aa1.75□□□□□ -2.13
NUP188YML103C UTP14Q04500 899 aaKnown RBP1.75□□□□□ -2.13
NUP188YML103C ISC10P32645 267 aa1.75□□□□□ -2.13
NUP188YML103C YBR197CP38306 217 aa1.75□□□□□ -2.13
NUP188YML103C MSN5P52918 1224 aa1.75□□□□□ -2.13
NUP188YML103C MRPL33P20084 86 aa1.75□□□□□ -2.13
NUP188YML103C BUD31P25337 157 aaPredicted RBP1.75□□□□□ -2.13
NUP188YML103C RRP14P36080 434 aaKnown RBP1.75□□□□□ -2.13
NUP188YML103C IRS4P36115 615 aaKnown RBP1.75□□□□□ -2.13
NUP188YML103C YPQ2Q06328 317 aa1.75□□□□□ -2.13
NUP188YML103C AHP1P38013 176 aaKnown RBP1.75□□□□□ -2.13
NUP188YML103C NTA1P40354 457 aa1.75□□□□□ -2.13
NUP188YML103C HXT8P40886 569 aa1.75□□□□□ -2.13
NUP188YML103C MSB3P48566 633 aaPredicted RBP1.75□□□□□ -2.13
NUP188YML103C FRK1Q03002 865 aaPredicted RBP1.75□□□□□ -2.13
NUP188YML103C NOC3Q07896 663 aaPredicted RBP1.75□□□□□ -2.13
NUP188YML103C TMA46Q12000 345 aaKnown RBP1.75□□□□□ -2.13
NUP188YML103C PRE9P23638 258 aaKnown RBP1.74□□□□□ -2.13
NUP188YML103C ECM2P38241 364 aaKnown RBP1.74□□□□□ -2.13
NUP188YML103C NOP2P40991 618 aaKnown RBP1.74□□□□□ -2.13
NUP188YML103C DFG5Q05031 458 aa1.74□□□□□ -2.13
NUP188YML103C PHO4P07270 312 aaKnown RBP1.74□□□□□ -2.13
NUP188YML103C CDC4P07834 779 aa1.74□□□□□ -2.13
NUP188YML103C RAD27P26793 382 aa1.74□□□□□ -2.13
NUP188YML103C BRN1P38170 754 aa1.74□□□□□ -2.13
NUP188YML103C RAD55P38953 406 aa1.74□□□□□ -2.13
NUP188YML103C YAF9P53930 226 aa1.74□□□□□ -2.13
NUP188YML103C OYE2Q03558 400 aaKnown RBP1.74□□□□□ -2.13
NUP188YML103C PMT7Q06644 662 aa1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms