RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C SRC1Q03707 834 aa5.39□□□□□ -1.55
VPS33YLR396C SRS2P12954 1174 aa5.38□□□□□ -1.55
VPS33YLR396C DLD3P39976 496 aaKnown RBP5.38□□□□□ -1.55
VPS33YLR396C PNP1Q05788 311 aa5.38□□□□□ -1.55
VPS33YLR396C YPQ2Q06328 317 aa5.38□□□□□ -1.55
VPS33YLR396C PUN1Q06991 263 aa5.38□□□□□ -1.55
VPS33YLR396C NOP8Q08287 484 aaPredicted RBP5.38□□□□□ -1.55
VPS33YLR396C ARG82P07250 355 aa5.38□□□□□ -1.55
VPS33YLR396C UTP7P40055 554 aaKnown RBP5.38□□□□□ -1.55
VPS33YLR396C SUM1P46676 1062 aa5.38□□□□□ -1.55
VPS33YLR396C PTK2P47116 818 aaKnown RBP5.38□□□□□ -1.55
VPS33YLR396C HAT1Q12341 374 aa5.38□□□□□ -1.55
VPS33YLR396C TRK1P12685 1235 aa5.37□□□□□ -1.55
VPS33YLR396C YJR115WP47152 169 aa5.37□□□□□ -1.55
VPS33YLR396C SSF1P38789 453 aaPredicted RBP5.36□□□□□ -1.55
VPS33YLR396C ALD4P46367 519 aaKnown RBP5.36□□□□□ -1.55
VPS33YLR396C MCM1P11746 286 aa5.36□□□□□ -1.55
VPS33YLR396C CWH41P53008 833 aa5.35□□□□□ -1.55
VPS33YLR396C BOL3P39724 118 aa5.35□□□□□ -1.55
VPS33YLR396C KAR5Q04746 504 aa5.35□□□□□ -1.55
VPS33YLR396C SSN3P39073 555 aa5.34□□□□□ -1.55
VPS33YLR396C SRF1Q12516 437 aa5.34□□□□□ -1.55
VPS33YLR396C CAB1Q04430 367 aa5.33□□□□□ -1.56
VPS33YLR396C DLD1P32891 587 aa5.33□□□□□ -1.56
VPS33YLR396C HXT5P38695 592 aa5.33□□□□□ -1.56
VPS33YLR396C NUP85P46673 744 aa5.33□□□□□ -1.56
VPS33YLR396C YBL113CQ7M4S9 792 aa5.33□□□□□ -1.56
VPS33YLR396C FUR4P05316 633 aaKnown RBP5.32□□□□□ -1.56
VPS33YLR396C YBR197CP38306 217 aa5.32□□□□□ -1.56
VPS33YLR396C MSN5P52918 1224 aa5.32□□□□□ -1.56
VPS33YLR396C TRL1P09880 827 aaKnown RBP5.32□□□□□ -1.56
VPS33YLR396C ERP5P38819 212 aa5.32□□□□□ -1.56
VPS33YLR396C BRE2P43132 505 aa5.32□□□□□ -1.56
VPS33YLR396C VTC4P47075 721 aa5.31□□□□□ -1.56
VPS33YLR396C YJR098CP47139 656 aa5.31□□□□□ -1.56
VPS33YLR396C ATG1P53104 897 aa5.31□□□□□ -1.56
VPS33YLR396C RRN6P32786 894 aa5.3□□□□□ -1.56
VPS33YLR396C ALA1P40825 983 aaKnown RBP5.3□□□□□ -1.56
VPS33YLR396C JJJ2P46997 583 aa5.3□□□□□ -1.56
VPS33YLR396C LSO1Q3E827 93 aa5.3□□□□□ -1.56
VPS33YLR396C DAL1P32375 460 aa5.3□□□□□ -1.56
VPS33YLR396C SCD5P34758 872 aa5.3□□□□□ -1.56
VPS33YLR396C LSC2P53312 427 aa5.3□□□□□ -1.56
VPS33YLR396C YNL165WP53891 406 aa5.3□□□□□ -1.56
VPS33YLR396C FOX2Q02207 900 aaKnown RBP5.3□□□□□ -1.56
VPS33YLR396C SEN54Q02825 467 aaPredicted RBP5.3□□□□□ -1.56
VPS33YLR396C ISC10P32645 267 aa5.29□□□□□ -1.56
VPS33YLR396C SLA1P32790 1244 aa5.29□□□□□ -1.56
VPS33YLR396C SHM1P37292 490 aaPredicted RBP5.29□□□□□ -1.56
VPS33YLR396C BOI1P38041 980 aaKnown RBP5.29□□□□□ -1.56
VPS33YLR396C SLD2P34252 453 aa5.28□□□□□ -1.56
VPS33YLR396C TY1A-DR3Q12441 440 aa5.28□□□□□ -1.56
VPS33YLR396C RPS31P05759 152 aaKnown RBP5.28□□□□□ -1.56
VPS33YLR396C MDJ2P42834 146 aa5.28□□□□□ -1.56
VPS33YLR396C GCR2Q01722 534 aa5.28□□□□□ -1.56
VPS33YLR396C UTP4Q06679 776 aaKnown RBP5.28□□□□□ -1.56
VPS33YLR396C MRPL33P20084 86 aa5.27□□□□□ -1.57
VPS33YLR396C GLO3P38682 493 aaKnown RBP5.27□□□□□ -1.57
VPS33YLR396C QDR1P40475 563 aa5.27□□□□□ -1.57
VPS33YLR396C APC11Q12157 165 aa5.27□□□□□ -1.57
VPS33YLR396C Q0182Q9ZZW1 134 aa5.27□□□□□ -1.57
VPS33YLR396C MLF3P32047 452 aa5.27□□□□□ -1.57
VPS33YLR396C GRS1P38088 690 aaKnown RBP5.27□□□□□ -1.57
VPS33YLR396C STM1P39015 273 aaKnown RBP5.27□□□□□ -1.57
VPS33YLR396C ACF4P47129 309 aa5.27□□□□□ -1.57
VPS33YLR396C TCB1Q12466 1186 aa5.27□□□□□ -1.57
VPS33YLR396C IRE1P32361 1115 aa5.26□□□□□ -1.57
VPS33YLR396C AHP1P38013 176 aaKnown RBP5.26□□□□□ -1.57
VPS33YLR396C OPT2Q06593 877 aa5.25□□□□□ -1.57
VPS33YLR396C KTR2P33550 425 aa5.25□□□□□ -1.57
VPS33YLR396C VMA3P25515 160 aa5.24□□□□□ -1.57
VPS33YLR396C YHL050CP38721 697 aa5.24□□□□□ -1.57
VPS33YLR396C YHR219WP38900 624 aa5.24□□□□□ -1.57
VPS33YLR396C UBP2Q01476 1272 aa5.24□□□□□ -1.57
VPS33YLR396C RPB10P22139 70 aa5.24□□□□□ -1.57
VPS33YLR396C YLR346CQ06139 101 aa5.24□□□□□ -1.57
VPS33YLR396C MSC6Q08818 692 aaKnown RBP5.24□□□□□ -1.57
VPS33YLR396C PSH1Q12161 406 aa5.24□□□□□ -1.57
VPS33YLR396C PDC6P26263 563 aaKnown RBP5.23□□□□□ -1.57
VPS33YLR396C GLY1P37303 387 aaKnown RBP5.23□□□□□ -1.57
VPS33YLR396C IPL1P38991 367 aa5.22□□□□□ -1.57
VPS33YLR396C SPR3P41901 512 aa5.22□□□□□ -1.57
VPS33YLR396C ALD2P47771 506 aa5.22□□□□□ -1.57
VPS33YLR396C UBP15P50101 1230 aa5.22□□□□□ -1.57
VPS33YLR396C NUT2Q06213 157 aa5.22□□□□□ -1.57
VPS33YLR396C FRT1Q99332 602 aa5.22□□□□□ -1.57
VPS33YLR396C CDC19P00549 500 aaKnown RBP5.22□□□□□ -1.57
VPS33YLR396C SEC20P28791 383 aa5.22□□□□□ -1.57
VPS33YLR396C YTA6P40328 754 aa5.22□□□□□ -1.57
VPS33YLR396C LEU1P07264 779 aaKnown RBP5.21□□□□□ -1.58
VPS33YLR396C QDR2P40474 542 aa5.21□□□□□ -1.58
VPS33YLR396C TY1A-BLQ12266 440 aa5.21□□□□□ -1.58
VPS33YLR396C MET22P32179 357 aa5.2□□□□□ -1.58
VPS33YLR396C PPX1P38698 397 aa5.2□□□□□ -1.58
VPS33YLR396C OSH7P38755 437 aa5.2□□□□□ -1.58
VPS33YLR396C RGA1P39083 1007 aa5.2□□□□□ -1.58
VPS33YLR396C TRS120Q04183 1289 aa5.2□□□□□ -1.58
VPS33YLR396C LCB5Q06147 687 aaKnown RBP5.2□□□□□ -1.58
VPS33YLR396C RPC31P17890 251 aa5.2□□□□□ -1.58
VPS33YLR396C KAP122P32767 1081 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 146.2 ms