RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C TY1A-LR1P0CX68 440 aa5.86□□□□□ -1.47
CDC42YLR229C TY1A-MR2P0CX69 440 aa5.86□□□□□ -1.47
CDC42YLR229C MRF1P30775 413 aaPredicted RBP5.86□□□□□ -1.47
CDC42YLR229C SIS2P36024 562 aa5.86□□□□□ -1.47
CDC42YLR229C TY1A-JR2P47099 440 aa5.86□□□□□ -1.47
CDC42YLR229C TY1A-DR1Q03856 440 aa5.86□□□□□ -1.47
CDC42YLR229C TY1A-ML1Q04706 440 aaKnown RBP5.86□□□□□ -1.47
CDC42YLR229C TY1A-BRQ12217 440 aa5.86□□□□□ -1.47
CDC42YLR229C TY1A-NL2Q12470 440 aa5.86□□□□□ -1.47
CDC42YLR229C TY1A-GR2Q12485 440 aa5.86□□□□□ -1.47
CDC42YLR229C DRS2P39524 1355 aa5.85□□□□□ -1.47
CDC42YLR229C SEC2P17065 759 aa5.85□□□□□ -1.47
CDC42YLR229C PAF1P38351 445 aa5.85□□□□□ -1.47
CDC42YLR229C TRM3Q07527 1436 aa5.84□□□□□ -1.47
CDC42YLR229C ERG12P07277 443 aa5.84□□□□□ -1.47
CDC42YLR229C YDJ1P25491 409 aaKnown RBP5.84□□□□□ -1.47
CDC42YLR229C ENP1P38333 483 aaKnown RBP5.84□□□□□ -1.47
CDC42YLR229C AGE1Q04412 482 aa5.84□□□□□ -1.47
CDC42YLR229C YPR015CQ12531 247 aa5.84□□□□□ -1.47
CDC42YLR229C SEC7P11075 2009 aaKnown RBP5.84□□□□□ -1.48
CDC42YLR229C SUP45P12385 437 aaKnown RBP5.83□□□□□ -1.48
CDC42YLR229C YPR097WQ06839 1073 aa5.83□□□□□ -1.48
CDC42YLR229C SEC3P33332 1336 aaKnown RBP5.82□□□□□ -1.48
CDC42YLR229C ENO2P00925 437 aaKnown RBP5.82□□□□□ -1.48
CDC42YLR229C TEC1P18412 486 aa5.82□□□□□ -1.48
CDC42YLR229C VRP1P37370 817 aa5.82□□□□□ -1.48
CDC42YLR229C PAC1P39946 494 aaKnown RBP5.82□□□□□ -1.48
CDC42YLR229C ATG3P40344 310 aa5.81□□□□□ -1.48
CDC42YLR229C ENV9Q08651 330 aa5.81□□□□□ -1.48
CDC42YLR229C DOP1Q03921 1698 aa5.81□□□□□ -1.48
CDC42YLR229C PDC1P06169 563 aaKnown RBP5.8□□□□□ -1.48
CDC42YLR229C SSA1P10591 642 aaKnown RBP5.8□□□□□ -1.48
CDC42YLR229C HXT10P43581 546 aa5.8□□□□□ -1.48
CDC42YLR229C STE20Q03497 939 aaKnown RBP5.8□□□□□ -1.48
CDC42YLR229C ITT1Q04638 464 aa5.8□□□□□ -1.48
CDC42YLR229C MCM16Q12262 181 aa5.8□□□□□ -1.48
CDC42YLR229C YOR093CQ12275 1648 aa5.8□□□□□ -1.48
CDC42YLR229C PDR5P33302 1511 aaKnown RBP5.79□□□□□ -1.48
CDC42YLR229C CPS1P27614 576 aa5.79□□□□□ -1.48
CDC42YLR229C GUT2P32191 649 aa5.79□□□□□ -1.48
CDC42YLR229C RPL34AP87262 121 aaPredicted RBP5.79□□□□□ -1.48
CDC42YLR229C ENO1P00924 437 aaKnown RBP5.78□□□□□ -1.48
CDC42YLR229C KIP2P28743 706 aa5.78□□□□□ -1.48
CDC42YLR229C BCK2P33306 851 aa5.78□□□□□ -1.48
CDC42YLR229C MRX12P47084 519 aa5.78□□□□□ -1.48
CDC42YLR229C RIM21P48565 533 aa5.78□□□□□ -1.48
CDC42YLR229C SUB2Q07478 446 aaKnown RBP5.78□□□□□ -1.48
CDC42YLR229C CHC1P22137 1653 aaKnown RBP5.78□□□□□ -1.48
CDC42YLR229C RRD1P40454 393 aaKnown RBP5.77□□□□□ -1.49
CDC42YLR229C EMP47P43555 445 aa5.77□□□□□ -1.49
CDC42YLR229C YEL077CQ3E7X8 1277 aa5.77□□□□□ -1.49
CDC42YLR229C RAV1P47104 1357 aa5.77□□□□□ -1.49
CDC42YLR229C RTC1Q08281 1341 aa5.76□□□□□ -1.49
CDC42YLR229C ISF1P32488 338 aa5.76□□□□□ -1.49
CDC42YLR229C TTI1P36097 1038 aa5.76□□□□□ -1.49
CDC42YLR229C PDR11P40550 1411 aa5.75□□□□□ -1.49
CDC42YLR229C URN1Q06525 465 aaKnown RBP5.75□□□□□ -1.49
CDC42YLR229C VMR1P38735 1592 aa5.75□□□□□ -1.49
CDC42YLR229C BNI1P41832 1953 aa5.75□□□□□ -1.49
CDC42YLR229C TPD3P31383 635 aa5.74□□□□□ -1.49
CDC42YLR229C GEF1P37020 779 aa5.74□□□□□ -1.49
CDC42YLR229C FIG4P42837 879 aa5.74□□□□□ -1.49
CDC42YLR229C IML1P47170 1584 aa5.74□□□□□ -1.49
CDC42YLR229C NUP188P52593 1655 aaKnown RBP5.74□□□□□ -1.49
CDC42YLR229C IXR1P33417 597 aa5.73□□□□□ -1.49
CDC42YLR229C SYH1Q02875 849 aaKnown RBP5.73□□□□□ -1.49
CDC42YLR229C MRX10Q05648 414 aa5.73□□□□□ -1.49
CDC42YLR229C FRA1Q07825 749 aa5.73□□□□□ -1.49
CDC42YLR229C VAC17P25591 423 aa5.72□□□□□ -1.49
CDC42YLR229C ESL2P36168 1195 aa5.72□□□□□ -1.49
CDC42YLR229C TAF5P38129 798 aa5.72□□□□□ -1.49
CDC42YLR229C IPL1P38991 367 aa5.72□□□□□ -1.49
CDC42YLR229C KTR7P40504 517 aa5.72□□□□□ -1.49
CDC42YLR229C ORC1P54784 914 aaPredicted RBP5.72□□□□□ -1.49
CDC42YLR229C FRK1Q03002 865 aaPredicted RBP5.72□□□□□ -1.49
CDC42YLR229C DNF2Q12675 1612 aa5.71□□□□□ -1.5
CDC42YLR229C TY3B-IQ7LHG5 1498 aaKnown RBP5.71□□□□□ -1.5
CDC42YLR229C MHP1P43638 1398 aa5.7□□□□□ -1.5
CDC42YLR229C MOD5P07884 428 aa5.7□□□□□ -1.5
CDC42YLR229C TGL4P36165 910 aa5.7□□□□□ -1.5
CDC42YLR229C TYS1P36421 394 aaKnown RBP5.7□□□□□ -1.5
CDC42YLR229C XDJ1P39102 459 aa5.7□□□□□ -1.5
CDC42YLR229C BDP1P46678 594 aa5.7□□□□□ -1.5
CDC42YLR229C UTP13Q05946 817 aaKnown RBP5.7□□□□□ -1.5
CDC42YLR229C SPT7P35177 1332 aa5.7□□□□□ -1.5
CDC42YLR229C SOH1P38633 127 aa5.69□□□□□ -1.5
CDC42YLR229C YAP3P38749 330 aa5.69□□□□□ -1.5
CDC42YLR229C ECM23Q02710 187 aa5.68□□□□□ -1.5
CDC42YLR229C PUS5Q06244 254 aa5.68□□□□□ -1.5
CDC42YLR229C SCT1P32784 759 aa5.67□□□□□ -1.5
CDC42YLR229C KIP3P53086 805 aaKnown RBP5.67□□□□□ -1.5
CDC42YLR229C YPR084WQ06821 456 aa5.67□□□□□ -1.5
CDC42YLR229C ATG20Q07528 640 aa5.67□□□□□ -1.5
CDC42YLR229C RPP2BP02400 110 aaKnown RBP5.66□□□□□ -1.5
CDC42YLR229C YFL034WP43564 1073 aa5.66□□□□□ -1.5
CDC42YLR229C GAL2P13181 574 aa5.65□□□□□ -1.5
CDC42YLR229C HAP4P14064 554 aa5.65□□□□□ -1.5
CDC42YLR229C RDS2P19541 446 aaKnown RBP5.65□□□□□ -1.5
CDC42YLR229C PUP1P25043 261 aa5.65□□□□□ -1.5
CDC42YLR229C PEP12P32854 288 aa5.65□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms