RNA–Protein interactions for RNA: YLR085C

ARP6, Transcript of Actin-related protein that binds nucleosomes, yeastyeast

Gene ARP6, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ARP6YLR085C ROM2P51862 1356 aaKnown RBP12.16□□□□□ -0.46
ARP6YLR085C COBP00163 385 aa12.15□□□□□ -0.46
ARP6YLR085C ILV3P39522 585 aaKnown RBP12.15□□□□□ -0.46
ARP6YLR085C RPS19AP07280 144 aaKnown RBP12.13□□□□□ -0.47
ARP6YLR085C RPS19BP07281 144 aaPredicted RBP12.13□□□□□ -0.47
ARP6YLR085C DOT5P40553 215 aa12.13□□□□□ -0.47
ARP6YLR085C VPS64Q03944 604 aa12.13□□□□□ -0.47
ARP6YLR085C SWC3P31376 625 aa12.12□□□□□ -0.47
ARP6YLR085C NUP133P36161 1157 aa12.11□□□□□ -0.47
ARP6YLR085C NMD2P38798 1089 aaKnown RBP12.11□□□□□ -0.47
ARP6YLR085C FOX2Q02207 900 aaKnown RBP12.11□□□□□ -0.47
ARP6YLR085C YDR306CQ06640 478 aa12.11□□□□□ -0.47
ARP6YLR085C TIF11P38912 153 aaKnown RBP12.11□□□□□ -0.47
ARP6YLR085C DNM1P54861 757 aa12.11□□□□□ -0.47
ARP6YLR085C NOP53Q12080 455 aaKnown RBP12.11□□□□□ -0.47
ARP6YLR085C CST6P40535 587 aa12.09□□□□□ -0.47
ARP6YLR085C ECM16Q04217 1267 aaKnown RBP12.09□□□□□ -0.47
ARP6YLR085C RFC1P38630 861 aaKnown RBP12.08□□□□□ -0.48
ARP6YLR085C BOI2P39969 1040 aa12.08□□□□□ -0.48
ARP6YLR085C LAM6Q08001 693 aa12.08□□□□□ -0.48
ARP6YLR085C TUM1Q08686 304 aaKnown RBP12.08□□□□□ -0.48
ARP6YLR085C APL2P36000 726 aaPredicted RBP12.07□□□□□ -0.48
ARP6YLR085C NKP2Q06162 153 aa12.07□□□□□ -0.48
ARP6YLR085C SSP2Q08646 371 aa12.07□□□□□ -0.48
ARP6YLR085C SWI1P09547 1314 aa12.07□□□□□ -0.48
ARP6YLR085C GRX1P25373 110 aaKnown RBP12.06□□□□□ -0.48
ARP6YLR085C MSB4Q12317 492 aa12.06□□□□□ -0.48
ARP6YLR085C YKR075CP36155 307 aa12.05□□□□□ -0.48
ARP6YLR085C BDP1P46678 594 aa12.05□□□□□ -0.48
ARP6YLR085C RIM15P43565 1770 aa12.04□□□□□ -0.48
ARP6YLR085C STS1P38637 319 aa12.04□□□□□ -0.48
ARP6YLR085C YJL181WP46987 611 aa12.04□□□□□ -0.48
ARP6YLR085C PRP40P33203 583 aaKnown RBP12.03□□□□□ -0.48
ARP6YLR085C EAP1P36041 632 aaKnown RBP12.03□□□□□ -0.48
ARP6YLR085C PKH1Q03407 766 aa12.03□□□□□ -0.48
ARP6YLR085C RAD50P12753 1312 aa12.02□□□□□ -0.49
ARP6YLR085C LPD1P09624 499 aaKnown RBP12.02□□□□□ -0.49
ARP6YLR085C GCD7P32502 381 aaPredicted RBP12.02□□□□□ -0.49
ARP6YLR085C RPN11P43588 306 aaKnown RBP12.02□□□□□ -0.49
ARP6YLR085C HGH1P48362 394 aaKnown RBP12.01□□□□□ -0.49
ARP6YLR085C UBP12P39538 1254 aa12□□□□□ -0.49
ARP6YLR085C MDG1P53885 366 aa12□□□□□ -0.49
ARP6YLR085C VMA1P17255 1071 aaKnown RBP11.99□□□□□ -0.49
ARP6YLR085C SER1P33330 395 aaKnown RBP11.99□□□□□ -0.49
ARP6YLR085C YIR014WP40570 242 aa11.99□□□□□ -0.49
ARP6YLR085C ULI1P43604 169 aa11.99□□□□□ -0.49
ARP6YLR085C TEA1P47988 759 aa11.99□□□□□ -0.49
ARP6YLR085C YGL082WP53155 381 aa11.99□□□□□ -0.49
ARP6YLR085C OPY1P38271 328 aa11.98□□□□□ -0.49
ARP6YLR085C YJR008WP47085 338 aa11.98□□□□□ -0.49
ARP6YLR085C YPR204WQ08995 1032 aa11.98□□□□□ -0.49
ARP6YLR085C PHM7Q12252 991 aa11.98□□□□□ -0.49
ARP6YLR085C NCB2Q92317 146 aa11.98□□□□□ -0.49
ARP6YLR085C ARG8P18544 423 aa11.96□□□□□ -0.49
ARP6YLR085C PSH1Q12161 406 aa11.95□□□□□ -0.5
ARP6YLR085C SET4P42948 560 aa11.94□□□□□ -0.5
ARP6YLR085C ITC1P53125 1264 aa11.94□□□□□ -0.5
ARP6YLR085C FCP1Q03254 732 aa11.94□□□□□ -0.5
ARP6YLR085C RMD1Q03441 430 aa11.94□□□□□ -0.5
ARP6YLR085C YOL036WQ08206 761 aa11.94□□□□□ -0.5
ARP6YLR085C GRE2Q12068 342 aaKnown RBP11.94□□□□□ -0.5
ARP6YLR085C IME2P32581 645 aa11.93□□□□□ -0.5
ARP6YLR085C SSF1P38789 453 aaPredicted RBP11.93□□□□□ -0.5
ARP6YLR085C VAS1P07806 1104 aaKnown RBP11.92□□□□□ -0.5
ARP6YLR085C CDC16P09798 840 aa11.92□□□□□ -0.5
ARP6YLR085C DLD1P32891 587 aa11.92□□□□□ -0.5
ARP6YLR085C SET1P38827 1080 aaKnown RBP11.92□□□□□ -0.5
ARP6YLR085C YMR074CQ04773 145 aa11.92□□□□□ -0.5
ARP6YLR085C RLF2Q12495 606 aa11.92□□□□□ -0.5
ARP6YLR085C PDR18P53756 1333 aa11.92□□□□□ -0.5
ARP6YLR085C SUP35P05453 685 aaKnown RBP11.91□□□□□ -0.5
ARP6YLR085C BRN1P38170 754 aa11.91□□□□□ -0.5
ARP6YLR085C HXT10P43581 546 aa11.91□□□□□ -0.5
ARP6YLR085C EAF7P53911 425 aaKnown RBP11.91□□□□□ -0.5
ARP6YLR085C GCR2Q01722 534 aa11.91□□□□□ -0.5
ARP6YLR085C SAM3Q08986 587 aa11.91□□□□□ -0.5
ARP6YLR085C UBP1P25037 809 aa11.9□□□□□ -0.5
ARP6YLR085C SLA1P32790 1244 aa11.9□□□□□ -0.5
ARP6YLR085C NPR2P39923 615 aa11.9□□□□□ -0.5
ARP6YLR085C PCT1P13259 424 aa11.89□□□□□ -0.51
ARP6YLR085C NYV1Q12255 253 aa11.89□□□□□ -0.51
ARP6YLR085C LDB19Q12502 818 aa11.89□□□□□ -0.51
ARP6YLR085C ECM21P38167 1117 aaKnown RBP11.88□□□□□ -0.51
ARP6YLR085C SNU66Q12420 587 aaPredicted RBP11.88□□□□□ -0.51
ARP6YLR085C NOT3P06102 836 aaKnown RBP11.87□□□□□ -0.51
ARP6YLR085C YJL171CP46992 396 aa11.86□□□□□ -0.51
ARP6YLR085C MLC1P53141 149 aa11.86□□□□□ -0.51
ARP6YLR085C IOC2Q12072 812 aa11.86□□□□□ -0.51
ARP6YLR085C BUG1Q12191 341 aa11.86□□□□□ -0.51
ARP6YLR085C MAK11P20484 414 aaKnown RBP11.86□□□□□ -0.51
ARP6YLR085C GLN1P32288 370 aaKnown RBP11.86□□□□□ -0.51
ARP6YLR085C HXT13P39924 564 aa11.86□□□□□ -0.51
ARP6YLR085C YGL242CP53066 181 aa11.86□□□□□ -0.51
ARP6YLR085C FPR4Q06205 392 aaPredicted RBP11.86□□□□□ -0.51
ARP6YLR085C HXT17P53631 564 aa11.85□□□□□ -0.51
ARP6YLR085C MTC5Q03897 1148 aa11.85□□□□□ -0.51
ARP6YLR085C BRE1Q07457 700 aaKnown RBP11.85□□□□□ -0.51
ARP6YLR085C LYS4P49367 693 aaPredicted RBP11.84□□□□□ -0.51
ARP6YLR085C CTI6Q08923 506 aa11.84□□□□□ -0.51
ARP6YLR085C UTP10P42945 1769 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms