RNA–Protein interactions for RNA: YLR074C

BUD20, Transcript of C2H2-type zinc finger protein required for ribosome assembly, yeastyeast

Gene BUD20, Length 501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD20YLR074C MAL31P38156 614 aa10.59□□□□□ -0.71
BUD20YLR074C VPS4P52917 437 aa10.59□□□□□ -0.71
BUD20YLR074C SAS4Q04003 481 aa10.59□□□□□ -0.71
BUD20YLR074C AOS1Q06624 347 aa10.59□□□□□ -0.71
BUD20YLR074C KCC4P25389 1037 aa10.58□□□□□ -0.72
BUD20YLR074C SYF1Q04048 859 aaPredicted RBP10.58□□□□□ -0.72
BUD20YLR074C CST9Q06032 482 aa10.58□□□□□ -0.72
BUD20YLR074C SSP2Q08646 371 aa10.58□□□□□ -0.72
BUD20YLR074C KAR2P16474 682 aaKnown RBP10.57□□□□□ -0.72
BUD20YLR074C CSR2Q12734 1121 aa10.57□□□□□ -0.72
BUD20YLR074C HPR1P17629 752 aaKnown RBP10.56□□□□□ -0.72
BUD20YLR074C MOT2P34909 587 aaKnown RBP10.56□□□□□ -0.72
BUD20YLR074C AKL1P38080 1108 aaKnown RBP10.56□□□□□ -0.72
BUD20YLR074C DCD1P06773 312 aa10.55□□□□□ -0.72
BUD20YLR074C PCS60P38137 543 aaKnown RBP RIP-Chip data10.55□□□□□ -0.72not detected
BUD20YLR074C PNT1P38969 423 aa10.55□□□□□ -0.72
BUD20YLR074C ARG8P18544 423 aa10.54□□□□□ -0.72
BUD20YLR074C YPR117WQ06116 2489 aa10.53□□□□□ -0.72
BUD20YLR074C STV1P37296 890 aa10.52□□□□□ -0.73
BUD20YLR074C APE3P37302 537 aaKnown RBP10.52□□□□□ -0.73
BUD20YLR074C RSC30P38781 883 aa10.52□□□□□ -0.73
BUD20YLR074C RRT6P53117 311 aaPredicted RBP10.52□□□□□ -0.73
BUD20YLR074C HAT1Q12341 374 aa10.52□□□□□ -0.73
BUD20YLR074C AFG2P32794 780 aa10.51□□□□□ -0.73
BUD20YLR074C SET4P42948 560 aa10.51□□□□□ -0.73
BUD20YLR074C PAP2P53632 584 aaKnown RBP10.5□□□□□ -0.73
BUD20YLR074C CRF1Q04930 467 aa10.5□□□□□ -0.73
BUD20YLR074C TIF4632P39936 914 aaKnown RBP10.49□□□□□ -0.73
BUD20YLR074C NTH2P35172 780 aa10.48□□□□□ -0.73
BUD20YLR074C GAS5Q08193 484 aa10.48□□□□□ -0.73
BUD20YLR074C YVH1Q02256 364 aaKnown RBP10.47□□□□□ -0.73
BUD20YLR074C YPR204WQ08995 1032 aa10.47□□□□□ -0.73
BUD20YLR074C RRG1Q12167 365 aaPredicted RBP10.47□□□□□ -0.73
BUD20YLR074C SSK22P25390 1331 aaPredicted RBP10.47□□□□□ -0.73
BUD20YLR074C APL2P36000 726 aaPredicted RBP10.46□□□□□ -0.73
BUD20YLR074C LYS2P07702 1392 aa10.46□□□□□ -0.74
BUD20YLR074C HKR1P41809 1802 aa10.46□□□□□ -0.74
BUD20YLR074C TAO3P40468 2376 aa10.45□□□□□ -0.74
BUD20YLR074C RBA50Q04418 439 aa10.44□□□□□ -0.74
BUD20YLR074C CBP1P07252 654 aa10.43□□□□□ -0.74
BUD20YLR074C NSR1P27476 414 aaKnown RBP RIP-Chip data10.43□□□□□ -0.74 RIP-Chip
BUD20YLR074C UGA3P26370 528 aa10.42□□□□□ -0.74
BUD20YLR074C KRE2P27809 442 aa10.41□□□□□ -0.74
BUD20YLR074C SEN54Q02825 467 aaPredicted RBP10.4□□□□□ -0.74
BUD20YLR074C TRP5P00931 707 aaKnown RBP10.39□□□□□ -0.75
BUD20YLR074C FBP1P09201 348 aa10.39□□□□□ -0.75
BUD20YLR074C GSC2P40989 1895 aa10.38□□□□□ -0.75
BUD20YLR074C NSE3Q05541 303 aa10.38□□□□□ -0.75
BUD20YLR074C SGD1Q06132 899 aa10.38□□□□□ -0.75
BUD20YLR074C PSD2P53037 1138 aaKnown RBP10.37□□□□□ -0.75
BUD20YLR074C ASH1P34233 588 aa10.36□□□□□ -0.75
BUD20YLR074C VPS64Q03944 604 aa10.36□□□□□ -0.75
BUD20YLR074C UBX2Q04228 584 aa10.36□□□□□ -0.75
BUD20YLR074C GSM1P42950 618 aa10.35□□□□□ -0.75
BUD20YLR074C JIP4Q03361 876 aa10.35□□□□□ -0.75
BUD20YLR074C PDS5Q04264 1277 aa10.35□□□□□ -0.75
BUD20YLR074C FLO11P08640 1367 aa10.35□□□□□ -0.75
BUD20YLR074C ICP55P40051 511 aa10.34□□□□□ -0.75
BUD20YLR074C CLA4P48562 842 aa10.34□□□□□ -0.75
BUD20YLR074C YLR225CQ05948 407 aaKnown RBP10.34□□□□□ -0.75
BUD20YLR074C DPH6Q12429 685 aa10.34□□□□□ -0.75
BUD20YLR074C PAH1P32567 862 aa10.33□□□□□ -0.76
BUD20YLR074C ZDS2P54786 942 aa10.33□□□□□ -0.76
BUD20YLR074C TRK1P12685 1235 aa10.32□□□□□ -0.76
BUD20YLR074C UTP7P40055 554 aaKnown RBP10.32□□□□□ -0.76
BUD20YLR074C PRP42Q03776 544 aaKnown RBP10.32□□□□□ -0.76
BUD20YLR074C SPL2P38839 148 aa10.31□□□□□ -0.76
BUD20YLR074C SPR3P41901 512 aa10.31□□□□□ -0.76
BUD20YLR074C MTC3P53077 123 aa10.31□□□□□ -0.76
BUD20YLR074C RPT4P53549 437 aaKnown RBP10.31□□□□□ -0.76
BUD20YLR074C ULP1Q02724 621 aa10.31□□□□□ -0.76
BUD20YLR074C NIT1P40447 199 aa10.3□□□□□ -0.76
BUD20YLR074C YNL050CP53952 270 aa10.3□□□□□ -0.76
BUD20YLR074C YLR271WQ06152 274 aa10.3□□□□□ -0.76
BUD20YLR074C PKH1Q03407 766 aa10.29□□□□□ -0.76
BUD20YLR074C GAL2P13181 574 aa10.28□□□□□ -0.76
BUD20YLR074C FCP1Q03254 732 aa10.28□□□□□ -0.76
BUD20YLR074C DLD1P32891 587 aa10.27□□□□□ -0.77
BUD20YLR074C PSF2P40359 213 aa10.27□□□□□ -0.77
BUD20YLR074C RPS7AP26786 190 aaKnown RBP10.25□□□□□ -0.77
BUD20YLR074C TOS4Q06266 489 aa10.25□□□□□ -0.77
BUD20YLR074C POL5P39985 1022 aaKnown RBP10.24□□□□□ -0.77
BUD20YLR074C EAR1Q03212 550 aa10.24□□□□□ -0.77
BUD20YLR074C COQ4O13525 335 aa10.23□□□□□ -0.77
BUD20YLR074C MGM1P32266 881 aa10.23□□□□□ -0.77
BUD20YLR074C YJL171CP46992 396 aa10.23□□□□□ -0.77
BUD20YLR074C ARG82P07250 355 aa10.22□□□□□ -0.77
BUD20YLR074C ZDS1P50111 915 aaKnown RBP10.22□□□□□ -0.77
BUD20YLR074C RRP46P53256 223 aaPredicted RBP10.22□□□□□ -0.77
BUD20YLR074C PEX29Q03370 554 aa10.22□□□□□ -0.77
BUD20YLR074C BMS1Q08965 1183 aaKnown RBP10.22□□□□□ -0.77
BUD20YLR074C GIN4Q12263 1142 aa10.22□□□□□ -0.77
BUD20YLR074C THI3Q07471 609 aa10.21□□□□□ -0.77
BUD20YLR074C ACK1Q07622 623 aaPredicted RBP10.21□□□□□ -0.77
BUD20YLR074C PFK2P16862 959 aaKnown RBP RIP-Chip data10.2□□□□□ -0.78not detected
BUD20YLR074C LCB1P25045 558 aaKnown RBP10.2□□□□□ -0.78
BUD20YLR074C NGR1P32831 672 aaKnown RBP10.2□□□□□ -0.78
BUD20YLR074C YMR084WA2P2R3 262 aa10.19□□□□□ -0.78
BUD20YLR074C VPS62P53285 467 aa10.19□□□□□ -0.78
BUD20YLR074C IRC4Q03036 179 aa10.19□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms