RNA–Protein interactions for RNA: YKR029C

SET3, Transcript of Defining member of the SET3 histone deacetylase complex, yeastyeast

Gene SET3, Length 2,256 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SET3YKR029C SLA1P32790 1244 aa2.39□□□□□ -2.03
SET3YKR029C NIT1P40447 199 aa2.39□□□□□ -2.03
SET3YKR029C BUB1P41695 1021 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
SET3YKR029C ATF2P53296 535 aa2.39□□□□□ -2.03
SET3YKR029C HGH1P48362 394 aaKnown RBP2.38□□□□□ -2.03
SET3YKR029C AIM7Q12156 149 aa2.38□□□□□ -2.03
SET3YKR029C TAF1P46677 1066 aa2.38□□□□□ -2.03
SET3YKR029C YLR122CQ12312 125 aa2.38□□□□□ -2.03
SET3YKR029C KIN1P13185 1064 aa2.37□□□□□ -2.03
SET3YKR029C TRM1P15565 570 aaKnown RBP2.37□□□□□ -2.03
SET3YKR029C NAB2P32505 525 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03 RIP-Chip
SET3YKR029C GLC3P32775 704 aa2.37□□□□□ -2.03
SET3YKR029C DLD3P39976 496 aaKnown RBP2.37□□□□□ -2.03
SET3YKR029C NUP42P49686 430 aaKnown RBP2.37□□□□□ -2.03
SET3YKR029C DIT2P21595 489 aa2.37□□□□□ -2.03
SET3YKR029C MSN5P52918 1224 aa2.37□□□□□ -2.03
SET3YKR029C MAG2Q06436 670 aaKnown RBP2.37□□□□□ -2.03
SET3YKR029C NHA1Q99271 985 aa2.37□□□□□ -2.03
SET3YKR029C SAC7P17121 654 aa2.36□□□□□ -2.03
SET3YKR029C ARI1P53111 347 aaKnown RBP2.36□□□□□ -2.03
SET3YKR029C NIS1P53939 407 aa2.36□□□□□ -2.03
SET3YKR029C TY1A-DR2Q03964 440 aaKnown RBP2.35□□□□□ -2.03
SET3YKR029C TY1A-DR3Q12441 440 aa2.35□□□□□ -2.03
SET3YKR029C AHP1P38013 176 aaKnown RBP2.34□□□□□ -2.03
SET3YKR029C DMA2P53924 522 aa2.34□□□□□ -2.03
SET3YKR029C YML122CQ03207 126 aa2.34□□□□□ -2.03
SET3YKR029C SEG2P34250 1132 aa2.33□□□□□ -2.04
SET3YKR029C RPP2BP02400 110 aaKnown RBP2.33□□□□□ -2.04
SET3YKR029C TEA1P47988 759 aa2.33□□□□□ -2.04
SET3YKR029C YGR130CP53278 816 aa2.33□□□□□ -2.04
SET3YKR029C SSA2P10592 639 aaKnown RBP2.32□□□□□ -2.04
SET3YKR029C HDA2Q06629 674 aa2.32□□□□□ -2.04
SET3YKR029C SSN3P39073 555 aa2.31□□□□□ -2.04
SET3YKR029C HPC2Q01448 625 aa2.31□□□□□ -2.04
SET3YKR029C MCM16Q12262 181 aa2.31□□□□□ -2.04
SET3YKR029C BRL1P38770 471 aa2.3□□□□□ -2.04
SET3YKR029C CSN12P47130 423 aa2.3□□□□□ -2.04
SET3YKR029C YMR196WQ04336 1088 aa2.3□□□□□ -2.04
SET3YKR029C MRPL16P38064 232 aa2.3□□□□□ -2.04
SET3YKR029C ALG14P38242 237 aa2.3□□□□□ -2.04
SET3YKR029C GUA1P38625 525 aaKnown RBP2.3□□□□□ -2.04
SET3YKR029C GAS5Q08193 484 aa2.3□□□□□ -2.04
SET3YKR029C RLF2Q12495 606 aa2.3□□□□□ -2.04
SET3YKR029C PGM2P37012 569 aaKnown RBP2.29□□□□□ -2.04
SET3YKR029C FPK1P53739 893 aa2.29□□□□□ -2.04
SET3YKR029C GLN1P32288 370 aaKnown RBP2.28□□□□□ -2.04
SET3YKR029C PRP43P53131 767 aaKnown RBP2.28□□□□□ -2.04
SET3YKR029C SFA1P32771 386 aa2.28□□□□□ -2.05
SET3YKR029C TFB3Q03290 321 aa2.28□□□□□ -2.05
SET3YKR029C HST2P53686 357 aa2.27□□□□□ -2.05
SET3YKR029C GSF2Q04697 403 aaKnown RBP2.27□□□□□ -2.05
SET3YKR029C FRA1Q07825 749 aa2.27□□□□□ -2.05
SET3YKR029C MMP1Q12372 583 aa2.27□□□□□ -2.05
SET3YKR029C CYC7P00045 113 aa2.26□□□□□ -2.05
SET3YKR029C CHS2P14180 963 aa2.26□□□□□ -2.05
SET3YKR029C ECL1P48235 211 aa2.26□□□□□ -2.05
SET3YKR029C ISU1Q03020 165 aa2.26□□□□□ -2.05
SET3YKR029C STB3Q12427 513 aa2.26□□□□□ -2.05
SET3YKR029C NFS1P25374 497 aa2.25□□□□□ -2.05
SET3YKR029C LRG1P35688 1017 aa2.25□□□□□ -2.05
SET3YKR029C YBL036CP38197 257 aa2.25□□□□□ -2.05
SET3YKR029C SAF1P38352 637 aa2.25□□□□□ -2.05
SET3YKR029C RPL34BP40525 121 aaKnown RBP2.25□□□□□ -2.05
SET3YKR029C PKH3Q03306 898 aaPredicted RBP2.25□□□□□ -2.05
SET3YKR029C ESS1P22696 170 aa2.24□□□□□ -2.05
SET3YKR029C CSE4P36012 229 aa2.24□□□□□ -2.05
SET3YKR029C ARG8P18544 423 aa2.24□□□□□ -2.05
SET3YKR029C KTR1P27810 393 aaKnown RBP2.24□□□□□ -2.05
SET3YKR029C RRM3P38766 723 aa2.24□□□□□ -2.05
SET3YKR029C YJL007CP47080 104 aa2.24□□□□□ -2.05
SET3YKR029C RAD59Q12223 238 aa2.24□□□□□ -2.05
SET3YKR029C PKC1P24583 1151 aa2.23□□□□□ -2.05
SET3YKR029C SCJ1P25303 377 aa2.23□□□□□ -2.05
SET3YKR029C SPR3P41901 512 aa2.23□□□□□ -2.05
SET3YKR029C SPO74P45819 413 aa2.23□□□□□ -2.05
SET3YKR029C NGR1P32831 672 aaKnown RBP2.22□□□□□ -2.05
SET3YKR029C GAS1P22146 559 aaKnown RBP2.22□□□□□ -2.05
SET3YKR029C SPT5P27692 1063 aaKnown RBP2.22□□□□□ -2.05
SET3YKR029C BIM1P40013 344 aa2.22□□□□□ -2.05
SET3YKR029C FIG4P42837 879 aa2.22□□□□□ -2.05
SET3YKR029C RSC6P25632 483 aa2.21□□□□□ -2.06
SET3YKR029C YJU3P28321 313 aa2.21□□□□□ -2.06
SET3YKR029C POL12P38121 705 aaPredicted RBP2.21□□□□□ -2.06
SET3YKR029C IRE1P32361 1115 aa2.21□□□□□ -2.06
SET3YKR029C SNM1P40993 198 aa2.21□□□□□ -2.06
SET3YKR029C MSC7P38694 644 aa2.2□□□□□ -2.06
SET3YKR029C ATG32P40458 529 aa2.2□□□□□ -2.06
SET3YKR029C MAK16P10962 306 aaPredicted RBP2.2□□□□□ -2.06
SET3YKR029C YPP1P46951 817 aa2.2□□□□□ -2.06
SET3YKR029C WTM2Q12206 467 aa2.2□□□□□ -2.06
SET3YKR029C RPP1AP05318 106 aaPredicted RBP2.19□□□□□ -2.06
SET3YKR029C TIF1P10081 395 aaKnown RBP2.19□□□□□ -2.06
SET3YKR029C RTG2P32608 588 aaKnown RBP2.19□□□□□ -2.06
SET3YKR029C RSC30P38781 883 aa2.19□□□□□ -2.06
SET3YKR029C YNL108CP53929 270 aa2.19□□□□□ -2.06
SET3YKR029C SSA4P22202 642 aaKnown RBP2.19□□□□□ -2.06
SET3YKR029C BIO2P32451 375 aa2.19□□□□□ -2.06
SET3YKR029C SIS2P36024 562 aa2.19□□□□□ -2.06
SET3YKR029C NAR1P23503 491 aaKnown RBP2.18□□□□□ -2.06
SET3YKR029C FLR1P38124 548 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 69.3 ms