RNA–Protein interactions for RNA: YKL085W

MDH1, Transcript of Mitochondrial malate dehydrogenase, yeastyeast

Gene MDH1, Length 1,005 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH1YKL085W YGL082WP53155 381 aa8.64□□□□□ -1.03
MDH1YKL085W PDS5Q04264 1277 aa8.64□□□□□ -1.03
MDH1YKL085W IRC3Q06683 689 aa8.64□□□□□ -1.03
MDH1YKL085W TRK1P12685 1235 aa8.62□□□□□ -1.03
MDH1YKL085W ARG8P18544 423 aa8.62□□□□□ -1.03
MDH1YKL085W NTH2P35172 780 aa8.62□□□□□ -1.03
MDH1YKL085W VHR2P40041 505 aa8.62□□□□□ -1.03
MDH1YKL085W PAP2P53632 584 aaKnown RBP8.62□□□□□ -1.03
MDH1YKL085W GAP1P19145 602 aaPredicted RBP8.6□□□□□ -1.03
MDH1YKL085W UBP16Q02863 499 aa8.6□□□□□ -1.03
MDH1YKL085W DIB1Q06819 143 aaPredicted RBP8.6□□□□□ -1.03
MDH1YKL085W SSP2Q08646 371 aa8.6□□□□□ -1.03
MDH1YKL085W GRX6Q12438 231 aa8.6□□□□□ -1.03
MDH1YKL085W YIL089WP40500 205 aa8.58□□□□□ -1.04
MDH1YKL085W FET4P40988 552 aa8.57□□□□□ -1.04
MDH1YKL085W YPR204WQ08995 1032 aa8.56□□□□□ -1.04
MDH1YKL085W VPS13Q07878 3144 aa8.56□□□□□ -1.04
MDH1YKL085W FRD1P32614 470 aaKnown RBP8.55□□□□□ -1.04
MDH1YKL085W GLC3P32775 704 aa8.55□□□□□ -1.04
MDH1YKL085W SSP1P38871 571 aa8.55□□□□□ -1.04
MDH1YKL085W SYF1Q04048 859 aaPredicted RBP8.55□□□□□ -1.04
MDH1YKL085W DPL1Q05567 589 aa8.55□□□□□ -1.04
MDH1YKL085W MSM1P22438 575 aa8.54□□□□□ -1.04
MDH1YKL085W UGA3P26370 528 aa8.54□□□□□ -1.04
MDH1YKL085W RIM101P33400 625 aa8.54□□□□□ -1.04
MDH1YKL085W SPT21P35209 758 aa8.54□□□□□ -1.04
MDH1YKL085W APL2P36000 726 aaPredicted RBP8.54□□□□□ -1.04
MDH1YKL085W RRP46P53256 223 aaPredicted RBP8.54□□□□□ -1.04
MDH1YKL085W RPN1P38764 993 aaKnown RBP8.53□□□□□ -1.04
MDH1YKL085W TIM50Q02776 476 aa8.53□□□□□ -1.04
MDH1YKL085W SSK22P25390 1331 aaPredicted RBP8.53□□□□□ -1.04
MDH1YKL085W PEA2P40091 420 aa8.52□□□□□ -1.05
MDH1YKL085W SAS4Q04003 481 aa8.52□□□□□ -1.05
MDH1YKL085W HAT1Q12341 374 aa8.52□□□□□ -1.05
MDH1YKL085W SDH2P21801 266 aa8.51□□□□□ -1.05
MDH1YKL085W SET4P42948 560 aa8.51□□□□□ -1.05
MDH1YKL085W TYW1Q08960 810 aaKnown RBP8.51□□□□□ -1.05
MDH1YKL085W LYS2P07702 1392 aa8.5□□□□□ -1.05
MDH1YKL085W EMP47P43555 445 aa8.5□□□□□ -1.05
MDH1YKL085W YNL050CP53952 270 aa8.5□□□□□ -1.05
MDH1YKL085W YGR117CP53270 476 aa8.49□□□□□ -1.05
MDH1YKL085W AIM7Q12156 149 aa8.49□□□□□ -1.05
MDH1YKL085W VPS4P52917 437 aa8.48□□□□□ -1.05
MDH1YKL085W ZDS2P54786 942 aa8.48□□□□□ -1.05
MDH1YKL085W TRM44Q02648 567 aaKnown RBP8.48□□□□□ -1.05
MDH1YKL085W NSE3Q05541 303 aa8.48□□□□□ -1.05
MDH1YKL085W SRF1Q12516 437 aa8.48□□□□□ -1.05
MDH1YKL085W STV1P37296 890 aa8.47□□□□□ -1.05
MDH1YKL085W GAS5Q08193 484 aa8.47□□□□□ -1.05
MDH1YKL085W TIF6Q12522 245 aaKnown RBP8.47□□□□□ -1.05
MDH1YKL085W CWC15Q03772 175 aaKnown RBP8.46□□□□□ -1.06
MDH1YKL085W YBL029C-AQ3E756 94 aa8.46□□□□□ -1.06
MDH1YKL085W GSC2P40989 1895 aa8.46□□□□□ -1.06
MDH1YKL085W HVG1P0CE11 249 aa8.45□□□□□ -1.06
MDH1YKL085W HPR1P17629 752 aaKnown RBP8.45□□□□□ -1.06
MDH1YKL085W VPS64Q03944 604 aa8.45□□□□□ -1.06
MDH1YKL085W MAC1P35192 417 aa8.44□□□□□ -1.06
MDH1YKL085W PIB1Q06651 286 aa8.44□□□□□ -1.06
MDH1YKL085W COQ4O13525 335 aa8.43□□□□□ -1.06
MDH1YKL085W NSR1P27476 414 aaKnown RBP RIP-Chip data8.43□□□□□ -1.06not detected
MDH1YKL085W AFG2P32794 780 aa8.43□□□□□ -1.06
MDH1YKL085W YLR271WQ06152 274 aa8.43□□□□□ -1.06
MDH1YKL085W TRP5P00931 707 aaKnown RBP8.42□□□□□ -1.06
MDH1YKL085W KRE2P27809 442 aa8.42□□□□□ -1.06
MDH1YKL085W POL5P39985 1022 aaKnown RBP8.42□□□□□ -1.06
MDH1YKL085W FCP1Q03254 732 aa8.42□□□□□ -1.06
MDH1YKL085W FLO11P08640 1367 aa8.42□□□□□ -1.06
MDH1YKL085W BSD2P38356 321 aa8.41□□□□□ -1.06
MDH1YKL085W PNT1P38969 423 aa8.41□□□□□ -1.06
MDH1YKL085W ZDS1P50111 915 aaKnown RBP8.41□□□□□ -1.06
MDH1YKL085W NCS6P53088 359 aa8.41□□□□□ -1.06
MDH1YKL085W BMS1Q08965 1183 aaKnown RBP8.41□□□□□ -1.06
MDH1YKL085W RRG1Q12167 365 aaPredicted RBP8.41□□□□□ -1.06
MDH1YKL085W CSR2Q12734 1121 aa8.41□□□□□ -1.06
MDH1YKL085W PRD1P25375 712 aa8.4□□□□□ -1.06
MDH1YKL085W CRF1Q04930 467 aa8.4□□□□□ -1.06
MDH1YKL085W SPL2P38839 148 aa8.39□□□□□ -1.07
MDH1YKL085W ICP55P40051 511 aa8.39□□□□□ -1.07
MDH1YKL085W CST9Q06032 482 aa8.39□□□□□ -1.07
MDH1YKL085W MOT2P34909 587 aaKnown RBP8.38□□□□□ -1.07
MDH1YKL085W PCS60P38137 543 aaKnown RBP RIP-Chip data8.38□□□□□ -1.07not detected
MDH1YKL085W MAM1P40065 302 aa8.38□□□□□ -1.07
MDH1YKL085W YOL057WQ08225 711 aa8.38□□□□□ -1.07
MDH1YKL085W DPH6Q12429 685 aa8.38□□□□□ -1.07
MDH1YKL085W SWI1P09547 1314 aa8.37□□□□□ -1.07
MDH1YKL085W RTR1P40084 226 aaPredicted RBP8.37□□□□□ -1.07
MDH1YKL085W RPT4P53549 437 aaKnown RBP8.37□□□□□ -1.07
MDH1YKL085W YBR287WP38355 427 aa8.36□□□□□ -1.07
MDH1YKL085W UTP7P40055 554 aaKnown RBP8.36□□□□□ -1.07
MDH1YKL085W RRT6P53117 311 aaPredicted RBP8.36□□□□□ -1.07
MDH1YKL085W PKH1Q03407 766 aa8.36□□□□□ -1.07
MDH1YKL085W UBX2Q04228 584 aa8.36□□□□□ -1.07
MDH1YKL085W DUR1,2P32528 1835 aaKnown RBP8.36□□□□□ -1.07
MDH1YKL085W CBP1P07252 654 aa8.35□□□□□ -1.07
MDH1YKL085W BCH2P36122 765 aa8.35□□□□□ -1.07
MDH1YKL085W GSM1P42950 618 aa8.35□□□□□ -1.07
MDH1YKL085W YJR008WP47085 338 aa8.35□□□□□ -1.07
MDH1YKL085W DNM1P54861 757 aa8.35□□□□□ -1.07
MDH1YKL085W MST1P07236 462 aa8.34□□□□□ -1.07
MDH1YKL085W APE3P37302 537 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms